Gene detail

Detailed information of ENSOJPP00000013683.1 in Anthopleura xanthogrammica

Genomic Location: not available for this species
NR annotation: XP_031565105.1, neurogenic locus notch homolog protein 1-like [Actinia tenebrosa]
Species Anthopleura xanthogrammica · all data for this species · gene families

Sequence

CDS

Transcript

ENSOJPT00000015765

TTTTAGATTCGTTTCTCGTAGCTCAGTTCATTGTTGCGATGATGGAAAAACTCGTACTAGTATTACTAGTGCTTACGCTTGCTTCCGTGACGAGCTCACCGGCGGGACCGTGTCCACAGGAAACAGAGTGCTTCGGCCATGGGGACTGGGATCCAGCGACCCAGACCTGCAAATGCTACTCTGATAACTACCAAAAGAAGTGGGAGAGCCGGTATGGATCCTACACTGGGACCTGTTGCACAAGTATCAAGTGTACCCACCCGAACTCTACGTGTCTGCATGGAATATGTGGAGCTGATGGCACAAAATGTCAGAGATGCCAAACAGGGTGGATTGGACCAAACTGTGATAAGCTAGCCAATGATTCGTGTTACCCCTGGTTACCATGTAAACACGGAAAATGTGTCACAGCAAGgtttAAGTGCGAGTGTGACCCTGGATGGGTTGGAGACTTGTGTGACCGTTCGTTGTGTGACTCTTCAATCAAGTGCGTGTTTGGCGCGTGCCCTGATGATCCAAAGATATGCAAGTGTTATAGTGACTTCGTGTCTCCAGCTACTGGTTGCGACAGGATGTACTGTGCTGATGGCTGGACATGTTTGAATGGCGGTTATTGTGTGGACGTCCATCACTGTGTGTGTCCACCGTACTACACAGGAGAGCACTGTGAGACCATCGCTGGATGTAGTGTCCCATGTGAACATGGACGGTGCACCACAAATCCTGCAGTCTGTGATTGCGAAAAAAACTGGTCTGGGACAAACTGCAGCAAATATGTCGGCACTTGTAACAATTGTTCCTCTGTGGGCGGCACATGCTTTAAAGGACCCGATACGTGTGAGTGTAAGCCCGGTTATACGGGACCCCAGTGCTCCGTCATGAAATGTGATGGCTGTGTACACGGATTCTGTCAGATTAGTGGAGGGAAGAAGCATTGCATCTGCGACAAagGCTGGCTTAATACCCAAGGAGATCCCAGTTTTGATGGTCATGGCCCATGCACTAAAGTACAATACTGTCTAGTGCCATGTAACCTTCCCCAGGGATCGTGTCCTAACGACCCTTACAAGTGTGTGTGCACAGCGCCGTATGTTGGAGCGGAGTGTGACGTCATGAGATGTCCAAAATGCTGTCCACCAGAGACATGTGATTGTTCTAATCCAGCGAAAGTAAAGTGTAAAGGACGATGGCACCACAGTTGCTGTCTTATCAAATCGTGTTTCCGTGGAGACACACTCGTTCACACAACAAGGGGACTGATTCCAATACGTGACGTACGAGAAGGTGACATGGTTGTCACGCGACACGAAGGAGACGATCTTAGCGTGACTCATTTGAGGAAAGTAGATGCAGTTATCCAGAAGAATGTGTCCCTTGACGAGATGGTAGTACTGCGAACACATGGTGAAGACATATGGACTACCTATAACCACCCATTCTTCTCGCAGGACGAAAACAAGTGGATAGCAGCCGAAAACATTTCAACAGCTCACACGCTGCACGCAATCAAAGGAGGTGAAACCAAGCTAAAAGCAAAAGTTCCTGCACTACAGCTAGTTTCTTTGTCTAGCAGTGACAAAATCCCGGTCTATGACTTGGTAATTCACGAGTATGATCGGTACGCAGTCGGTAAGGATGGGTTCTTGGTATCCAGTTGTAATAGTACGGATCTCCTGACGCGGGACCAACAGATGTGGGGTGACAGCGCACACCCATTGTTCACAAACCACAAGAATCAGCTCCAAGAAAACAAGGCACAAGATACAGGAGCATTCAACTCCGAGTCAGCTTCAAAGGGAATGACCCCAGGGCTAGTCGCAGGGATCGTAGTTGGAGTGTTCGCTGTTCTGGCTGTAGTCATACTAGTTGTCAACAAGGTATCCAAAAGAAGACGATACAGCAACACTGACAACGAATACTTGACGGAGGAAACGCATCTAACGTCCTAATCTGCTGATGCGTCCTACTGTTGTGTTCCTGGTAGTTTACAAGCCACACAAAGCAATCAAGTTAGGTATAATTATGTTGACATGATGCGCGCTCTGATAAGCcgacaattttattttattttggtaTACCTGGTTTGATATGCTTTTTCCCCATAATTATGAGAGTTTACCCTACAAGATACAAAAAGCAGTCAAAAATCCGAGATCTAATGCGCGCTCCCAGACTCGCAGGGTGGTTGTATATGCTCTACTTCGACCTCTTACAGCACCCTCGCGACCCAACCATCGAGCATCTAGAATACGCACGCTAACCATTCCTTAAATGTACGACGGAGTTGAGCTGCGCCATGACAGCAAAATCTTCATGCTTTACAGTTATAAATTATGTAAACTAGAAGTTCTTTTGAAAGATTCGAGTCATGTCATGCAAACGTTAAATTCAGAAGCACATCTCCAGATATTTTGTAGATTTTGATATACATAACAATATGTGTTATAAAGGGTAGATATAAATGTGACAAACGTACGCAGTAAATATCACATCTTTAATCTAGCTTAAATTTTCCAAATGtatttaaaactaaaactatacaattaaaattctttttgtaCACAAACAAATGGCCTATGGTAGTACTTAATCTTATAAATAGCTAATAGAAGATCAAATATAGGAATGTATGTATGTAGTTTGTAGGTATATCATAAATAATTCGTCCTTCCTCACCTAAGTTTGTATTTTCCATAAGTGGGAGGGGAATATACAGCACaacctttacaaaatgccatcCGTGCTGATGTAATCAAAGAGCAGGAGATATAATCCCCCCAATCTCCAATAATAGACCATCTGATACAACATGGCACTCATGTTGTAAACATTACTTCAACCTTCAGCACTCTATATTGAATCTTTGATCTGttactcatcatcatcatataggCTGCGTAATGCTTCAAAAGCCACTACTGTGACTGTTAGTGAACCAATCTCCCCGT

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006040 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07591 all species →	PT-HINT	Pretoxin HINT domain	Family	Interproscan
PF07974 all species →	EGF_2	EGF-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006141 all species →	PTM	Intein N-terminal splicing region	Interproscan
IPR000742 all species →	Domain	EGF-like domain	Interproscan
IPR013111 all species →	Domain	EGF-like domain, extracellular	Interproscan
IPR002049 all species →	Domain	Laminin-type EGF domain	Interproscan
IPR003587 all species →	Domain	Hint domain N-terminal	Interproscan
IPR036844 all species →	Homologous_superfamily	Hint domain superfamily	Interproscan
IPR050906 all species →	Family	Notch signaling pathway	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24044 all species →	NOTCH LIGAND FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016539 all species →	Biological Process	intein-mediated protein splicing	Interproscan
GO:0005112 all species →	Molecular Function	Notch binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOJPP00000013683.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.