Gene detail

Detailed information of ENSOJPP00000014759.1 in Anthopleura xanthogrammica

Genomic Location: chr10:8487980...8504852
NR annotation: XP_031558349.1, RB1-inducible coiled-coil protein 1-like isoform X2 [Actinia tenebrosa]
Species Anthopleura xanthogrammica · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSOJPT00000017121

ATGTGGACGAGCGAGTATACGTTGGCGACTATATGTATGGGCGACTATATGGCATGTTGGCATGAAGTATATACCCACTGGCCTCTTGTCACAAGCGATCGACACAGCTTTCTCTTCACCTCTGAATCAGTAAACGAGGGGCATTCTGATAAAATGTGTGACCAGATCTCTGATGCTGTGTTAGATGCTCACCTAGAACAGGATCCCTTCGCGAAAGTTGCATGCGAAACGGCTGCAAAAACTGGAATGGTGTTGTTGTTTGGAGAGATAACCTCGGGTGCTCATGTTGACTACCAGTCTATCGTGCGGGACACAGTAAAAGACATCGGCTATGTGGACTCATCAACTGGATTTGATTACAAAACTTGTAGTGTTTTGTTAGCACTCCATGAGCAGGAGAAAGAGATCGCTGATAGTGTTCATGTTGGGAAAAAAGACGAAGAAATGGGTGCCGGGGATCAGGGGCTAATGTTTGGCTATGCCACAGACGAAACAAAGGAGCTTATGCCCCTAACAACCGTGCTAGCACACAATTTATGTGCAAGGCTATCAGAATGCAGAAGAAAAGACATTTTACCGTGGTTGCTACCCGATGGCAAGACGCAAGTTACTGTTGAATACAACTTAGAGGGTGGAGCTTGTATACCACAGCGTGTTCACACTGTACTCATATCCACTCAACACACCGCAGACGTTGGTGTTGAAGAGATAAGGCATCATCTCCTTGAGACAGTTATAAAACCAGTCGTTCCAGAAAAGTATTTAGATGAAAACACAATCTTGCATTTGCTTCCATCCGGCAAGTTTTTGAATGGTGGCCCAATTGCCGATGCTGGTCTGACAGGCCGCAAGATCATTGTAGACACCTATGGTGGGTGGGGTGCGCATGGTGGTGGTGCATTCTCAGGAAAGGATGTCACCAAAGTTGACAGGTCTGGAGCCTATGCCGCAAGGTGGATTGCCAAATCATTAGTTGCAGCAGGGCTCTGTAGACGCGTGCTAGTGCAAGTAGCATATGCTATTGGACTTGCTGAACCATTGTCTGTTGCCATATTTAGCTATGGTTCGAGTGAATACACTGATGACCAGCTCCTCAAAGTTGTTCAGGACAATTTCGATCTTCGTCCAGGGATGATTATAAGAGAACTGGACCTCAGAAGACCCATCTATAAAGCTACTAGTGTTTTTGGACATTTTAAGCCAGGGTTTCCATGGGAAGATgtaaaaacactgaaaatagATGTACAGACACTTATGTCAGCAGTGGCCACAGCCACAGGAATCCCAGTTGACAAACAAGTCCTGCTAATCACAGGAGGAGAAGCCTTGGATCCTAGCGACAGAGTTTGTAACTATAGCAATGCTGGTACAGATACCAGTCCCATCTATCTATTTAGCAAGAGTACCATTGAATCATCTGTTCCACCTTCACCAAGCCTTACATTTGGATCAGAAGCTAATCTAAAAGAACAAGTTGAAGTTTCCTTCAAACTTCCACCAACCTATGAAACTCTGGTATCTAGGGCTGAGCTGGCCTCTGAATTCAACCACTATGCTGTTGAGATTGCTAGGAATTGTGAAACCTTAATCAGTGAACAGGCATGCCAACAGCAAGGGTGGGGAGCTGTGGTAGCTAATCTGGATAATATAGCCAAGGAGTTTAGTGAGAGAGCAACTGTGGTACAACAAAGTTATAAAGAGTTTTTAGAATCAAGATCAAGATATCTGGAGCTTTATGATGAAATCCTTCAAATTCTTGCTGAGATACCTGTGTTGCCATGTCTGTTGTCCAGCCAGCATGCCAACAGACCAGAGTTCAGGGATGGTGTCAGTCTTCTGGAATGGATTAGTGCTCAAGATCATAAGAATAGCCTACAAGATATAGTCACCCAGTGTAGTACAGCTATTGGACAGTTTGATGAGAGTGTGATGCAAGGTGTAATGAATGAAGTATTTCAGGTACGAGAAGCACTAGACAACAGCAGCATGAAAGAAATTAAGGGTTTAGATGAAAGGTTGATGCATCTACAGCAGTTTCTACAGAAGGTACAAGAACTGATGCAGTCACAGTCAGATATggcacagGGCTTTATTCAAAACCAGACCAGGGCACAGAACATTGGAGATGCATCTGTTTTACCAGACCTGTGTGCAAGTCATCAGAAACAGTTGATGATGTTACTGAAGAACCACTCTCAGCTAAAGGATTATCTTCGCCGCTCTGCCAAAGCCAAAGAAGAATTATCAGTCAATCTACACACAAGACTAAGaCTTGATATCCTGGATCAAGTAAGTGAAGCACCAAAGATGtatgttgttgctgctgcagAAGTTGTTCGTCGTAGGAAATTCTCTTCTCAGTTTTTGAGGGTAAGATCCAAAAGTCTATCATTGAGGGCGGATCTTCAGCAGAAAAAAGACAGCCGACATTTCTTACAGACATTATTTACAGGAATGGAGGATCGACCTACAAAATTTGCTGACAAACACCCAAAGCCTTTTGACAGACAGCTGCCAATCATCACAGATCATGACCTGGAACATTTACAATCATTGGTCCCAAGGTTCAAAGAATACTTAGAAGAAAGTCCAATTAACATGAGCGTGGGAGAAGACTTCTCAGAAGCAAACTCACTTTCCATGATGTTCAAGCTGCAAGAATCACAGATGGTGTCTTCACAAAGCTCTCAAAAAGAAATGTCAGCCAGTAAGACATCCATGAGTGTGGATGTATCAACTCAAGCAGCTttttggatggatggaggaggGGTAGTTATTGAAGAATCCAAAGACTCCGATGAAGGGAACAACAAAAGTACAAGATTAGGTCAGATGAGCAGCTCCCAGACATCAACAGATGAATCAGCGCCATTAAATTTACAATCCAGTGATGAAAGCCCACCAAAAAGCCACCAGAAGGACAGCGACACAGGCTCAGAGCCGAGCTCTGGCTTAACAGACAGCGACATCATGTTTAAGTCTGCGCAAGAGGACTATGTTACAGTTGAAGGTGCTGACTTTGGCTCTAAAGATGACAGCTTTTCCCAGAATGAATGTACTCCTCATCCATCAATCATAAGTGAACACAACTCAAGTCAGACTCTCACGCTTACTAGCTCTGGTTCACAGAGTATTACAAGAATCACAGAATTAGAAGATGAACTAAAATGTAACACAGAAGAATTGAATACAATTGTTCAAAGGAATGCTAAACTAGAGGATCTTAACAAAAATTTGACAGAGTTGCTACAAAATGCTGTTGTTTCATTACGTGAGGAACTTAGAGCAAGTAGAGAATTGATTTCAGATTGCAAGGgaacaatgaacagagaaaTTCAGGTTGCGTGGAGTACAATGCAAGAATTTGCTGAAGAAGTTATTAATTCAGTGTCAACATTTGAGTCTGAAAGAACTAAACAAGAAATGGATCAAATTATTCGACAACTTGGTGAAAAATACCAGGAGGAGAAAACTGAATTATTAAACACTAAAGTgcaattagaattaaaaattaataatataactaTGGAATTACACAAAGTTCAGGAAGAATGTAATATCACCAAGGCTAAAAATGCTGACGAAATTCAAAGGTTAATGACAGAATTGGATGAATACAGGGGACAGTGTGAGGAACAGCAGAATATGTTGATGAAGttaaaggaaaacaaagggcAAACTGAGGAAGAACAGCAAACGCGATTCAATGCTATTATCATGAGACTGAAACGGGAGAAGGATCAAATAGTCAGtcaattaaatgaaaaaatgaaagaaatggaaatggaaaatgaGAAACAGAAAGTAGAATTAACTGAACTACGGCAAGAAAGGCATTCATCTTTGAAGGAGAAAGAGTTGCTAGTTTCAAACTTCCAGGAGAGGGAGAAGGAATATGCAGCATCGATGAGTGCCTTAGAACAAAAGCTACAACAGAATCAAAGCATGATGGAAATGAATGAGAAGGAATTTGAAATGAGGTtagagaaagagaaagctGGTGCTTTAATGTTGCTGGACATGGAGCGACATGTGTGGGAGGTATTAAATTTGTTTCAGGCATCAATGGAGAAggatgaacaaataaaatCTTTGAAGAAACAATTGGTAATAGACTTTCAGTGTGGTGACCTGATCCTGTTGATATTTGACCCAAGATATGAGAATTACCTTGTGTTTAGTACTGGACCTACCCTGTACTTCTTGCATCCTGAATCAATGAGTGTCTTAGACATTGCCACAAgTGGGGTTAAAAGGCGAGACTGGGTGTTGGCTCTGCTGACTGACAAGGAATACTGTCAGGCTAAGAAGGTATGCActgatttattatattattcatGTTCAACCAagcgatcacatatacatttcatattccatcatcatacgcaaaccaacattatcatgtattttccttag

Transcript

ENSOJPT00000017121

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q00266	S-adenosylmethionine synthase isoform type-1 OS=Homo sapiens OX=9606 GN=MAT1A PE=1 SV=2
P13444	S-adenosylmethionine synthase isoform type-1 OS=Rattus norvegicus OX=10116 GN=Mat1a PE=1 SV=2
P50305	Probable S-adenosylmethionine synthase 3 OS=Caenorhabditis elegans OX=6239 GN=sams-3 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0001670 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04108 all species →	ATG17_like	Autophagy protein ATG17-like domain	Domain	Interproscan
PF10377 all species →	ATG11	Autophagy-related protein 11	Family	Interproscan
PF02772 all species →	S-AdoMet_synt_M	S-adenosylmethionine synthetase, central domain	Domain	Interproscan
PF00438 all species →	S-AdoMet_synt_N	S-adenosylmethionine synthetase, N-terminal domain	Domain	Interproscan
PF02773 all species →	S-AdoMet_synt_C	S-adenosylmethionine synthetase, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022636 all species →	Homologous_superfamily	S-adenosylmethionine synthetase superfamily	Interproscan
IPR045326 all species →	Domain	Autophagy protein ATG17-like domain	Interproscan
IPR002133 all species →	Family	S-adenosylmethionine synthetase	Interproscan
IPR022631 all species →	Conserved_site	S-adenosylmethionine synthetase, conserved site	Interproscan
IPR019460 all species →	Domain	Autophagy-related protein 11, C-terminal	Interproscan
IPR022629 all species →	Domain	S-adenosylmethionine synthetase, central domain	Interproscan
IPR022628 all species →	Domain	S-adenosylmethionine synthetase, N-terminal	Interproscan
IPR022630 all species →	Domain	S-adenosylmethionine synthetase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11964 all species →	S-ADENOSYLMETHIONINE SYNTHETASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004478 all species →	Molecular Function	methionine adenosyltransferase activity	Interproscan
GO:0006556 all species →	Biological Process	S-adenosylmethionine biosynthetic process	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0005829 all species →	Cellular Component	cytosol	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOJPP00000014759.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.