Gene detail

Detailed information of ENSOJPP00000016317.1 in Anthopleura xanthogrammica

Genomic Location: :...
NR annotation: XP_031565967.1, uncharacterized protein LOC116301103 [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSOJPT00000018921

TTATGAATCAAGCAGCCTACGTGATCTACTCTATTAACACTCCAACTTTGCAAATCTATTACAACAATTTCTGTGCACGAGCCAATGGAATGCggatgctttttggtcagcaTTGTCAATACTTCATTGCCCATGTTCCGGGTTTAAACAAAGATCCCGATACAGTGTCGTTTGAGTCTGTTTGCACTCCTGGGTCCTACATCATACAGAAAGACTATGGCTTTGTTTTGATGGTTTATCAAAGGGACGACAACTACGtaaaaGAAGCAACCTTCTACATCCGTCGCCACGCAGACCTTAAAGAGACTTTCTCGTTTGCATCTTTTCACGACGGATGGTATTTAGCTGTTGGTAGCAAGGTCGGTGGGTCGGTCTACACAATGAAAGTGGCCTACAGCAACAACTCTAAGGAATTTGATCTTCAAAGTTCTTTTGTACTTAAGCCTCAAAAGGCAGGTATTGACCCGAAGGAATATTGTGCTGAGGAAACTATCACACCAACTATCAAGCCAAGTAACCCCTTGACCCCATCACCTGCAACCAAACACAAGTGCGTGGCTTTGAAATTCGAGAACCAAGTTGGGTCTCAATTCAAGATTTTATCAAGTCTTAAAAAAGATGGCTGGTTAGTTAATGGCGAAGAATTAAAGATGAATTTCACTTTTAAACGCCCAGAGCTGCATAACTTCATCTCTTTCAAAGCAATCGATCCTTCAGGaaaattcaagatttttcTGGATGGAGATACAACCATTTCAGTCATGCCTAGTATGGACTGTTCCTCCTACATTAACGTTGTAGCGACCGGTATTGAAGAGCCACATCCAAGTACCACATTGCCACCCACTACCGTAAAAACGATGCCCAGCACTCCCCCAACTACTAATACTCCACCTCCTGTCCAGACTGCACAACCAGCCTTTCCGCCCGCACCTCCCCCGGCTCCAGCCCCTGCTCCCCCTCCGATAACAACCACGACCATACCTACCACCAAGCCACCGTGTGTTGGACCATCACCTTGCCaaccaccaccgccaccaccaccaccgccgCCCCAGCCACAACCATCACCAGCACCGGGAccagGAATTCATTACCACATTCATTACCATAACAATCCCAATGTTCTTGGATGTTCACCCACTCATGGCGGGAATTCGGAAggtgcatgttgcatgttccCATATACGTACAATAATCAGACATACAACAGCTGTACCAATGTCAACAGTAACCAGAACTGGTGTGGAACCACAGGAAACTATGACCTGGACCAGAAGTGGGGATATTGTCAAGGATGCCATCAAACGCACGGAGGAAACGCAAATGGTGGATGCTGTCAGTTTCCATTCGTCTATCAAGGAATGATTTACAAACGATGTATAAAAGGAGATAAGCCCAAGCCTTGGTGTGGGACCACATACAACTACGACGATGATAATAAATGGGGATTCTGTAAAGATTGTAGGGGAGGTGTTCCTTCTCTTGGTGGCAATGCTGGTGGTGCTTGTTGTGTCTTTCcctttatttataaaggaaaGGTTTATAGCAGATGTACGTCAGATGATTCCGTTGACAATTGGTGCTCGACTACACCTCTTTATGATGTGGATAAAAAGTGGGGAATGTGTATATGATATGAAAATCAACAtcagagaaaaatatatggCAAGTTCTGTCTAAATATTACCTCAGAAATTCCCTTGGGCATTGATGGCACAAGTCACGGGAAATTCTACATATCATCAGTTGTTCTTCTACTCAACGATATTACCTTTTATATACGAATAGTTGAAAATGCGAAAGTACCTTGAAGGATTATATAAACTATAGCTAATTATTAGCTATCAGAGTTTAGTTTTTGTGCGCTATAATCTGTTTTATAAACTCATTTGCGGACAGAAATGTGTTAGGTATTATATAgtttattgatatttattggaaaataaaacaatagaagagaagaaaaaatatttgaatgttaTGGAGAAAACGACCAGTGACTCGGAACCCAAAGAAAGTAAATACACCCCACTCATTACCTCTTTTTTGCAAATTGATTGAATGCAAAACATGACGCCCAATTTCCCATCTTTTGAAtaagaatgatattttttgCACTTGCGTTGTCAATCA

Protein

Uniprot

Uniprot term	Description
P41245	Matrix metalloproteinase-9 OS=Mus musculus OX=10090 GN=Mmp9 PE=1 SV=2
P08253	72 kDa type IV collagenase OS=Homo sapiens OX=9606 GN=MMP2 PE=1 SV=2
P33434	72 kDa type IV collagenase OS=Mus musculus OX=10090 GN=Mmp2 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00040	fn2	Fibronectin type II domain	Domain	Interproscan
PF05270	AbfB	Alpha-L-arabinofuranosidase B (ABFB) domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000562	Domain	Fibronectin type II domain	Interproscan
IPR013806	Homologous_superfamily	Kringle-like fold	Interproscan
IPR036943	Homologous_superfamily	Fibronectin type II domain superfamily	Interproscan
IPR036195	Homologous_superfamily	Alpha-L-arabinofuranosidase B, arabinose-binding domain superfamily	Interproscan
IPR051666	Family	Seminal Plasma Capacitation Regulator	Interproscan
IPR007934	Domain	Alpha-L-arabinofuranosidase B, arabinose-binding domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22918	SEMINAL PLASMA PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0046373	Biological Process	L-arabinose metabolic process	Interproscan
GO:0046556	Molecular Function	alpha-L-arabinofuranosidase activity	Interproscan
GO:0008201	Molecular Function	heparin binding	Interproscan
GO:0009986	Cellular Component	cell surface	Interproscan