Gene detail

Detailed information of ENSOJPP00000016463.1 in Anthopleura xanthogrammica

Genomic Location: not available for this species
NR annotation: XP_031565400.1, kelch-like protein 20 [Actinia tenebrosa]
Species Anthopleura xanthogrammica · all data for this species · gene families

Sequence

CDS

Transcript

ENSOJPT00000019083

CGTAGGTAGTGTTTGTAGTCGAAACAAAAGTCCTTGAGAGGCAGCTGCAAGACTCTTGATGCGacctggaaaaaatatattcctttattttatttgactaAAAACTAATAATGAATTCAAGGTTGTTCTTAAAACACAAAGCACAGTCGGTTCTAAGCAGATATTGTTTATAAATCTAGCTCACGCTCAGGGAGAATCgtcttgaatttcaattttgtaaAAAGCTAAAACAAGCTAAGTCGATAGTCAAGAAATAACTGAGACGTATCATTACAACTCCGAACTTGTGCAAATCTAAGATGTCTGCGAGTTCAAAATCGTCAATTCAGTCGTTCTTCGAGGCTAGGAATCACTGTCGTGAGGCGTTCAGCATACTTCATGAAATGAGAGGCAACATGGAACTTTGTGACGTGGTTCTTAAAGTGGGAAACCTGACTTTAACTGCACACAGGGCTGTGCTAGCCGCTACATCACCTTTTTTCAGACGAGAATTTTCCGCTTCTGAGCTTGACCGATCTAATAACGAATTCGTGATGCCTGACAATATCCAACCTGAGTCAATGGCGGCTATGATAGAATTCCTCTATACAGGGTCCTTACACATCAACGTGAAACACACAGAGGAACTTCTAGAAATTGCAAGTTTATTAAAGAACGAAGAAGCTTTACAAGCAGTGATCGAATCTGTAATCACGAGCATAAGCATTTCAAACTGCCTTCGACTGCAACACGCGGCCAAAAGACACAAGCTTGCTGAAATGAAAGACAAAATCGACAGATTTGTGGAGTGGAACTTCGAAGAGGTCGCCAAACATAAAGCATTTCTGTCACTGGAAGCTGAACAGTTAAGAGAAAtactaaaaagtgaaaatctGAGAGTTAAAGGCGAAGAGATTGCCTACGAAGCTGTTTATAAATGGTACATGCACGATCGTGATAATAGAAGAGAGTCTGCAGAAAGAGTATTTGGAGAAGTCCGATTTTGTCAGATACCCGAGAATATATTAATTCGTCAAGTCATCCCAGACCttgtggaaaaagaaaacctcTGTGCGCAACTCGTAGAGAAGGCAATGGactaccacagggatcccactaACCCCTCCCGCCCAAGAAAACCAGTAGATTCAATTTATATATTAAGTAGAAGAGACAGCATAGCAGAGCGCTTTGATCAAGTCCACGGCACATGTACTCCCTGTTACTCTATGGTTCccgttgatgatggtgatggggAACACCGCTGTACAGTAAAGGTTGGCGAGGATCTACTTGCTGTATATGAAACACGAGTTGAGAAGTATGATCCTATTGGACTATGCTGGCTAGGTGTTGGCCCAGGTATAGATACATACGACTCAGCAGTCTGTGCTGGTAAGAACTGCATCTATGTTGTGGGAGGAAAATCCCATGGAGAAAAaggatacaaattcagtattAAGAATTCAACGTGGACAGAGCTGCCTAGTATGTCTGAGAGTCGTAGGCTACCAGGTGCAGCTTGCATCGGGAACAAGCTATACGTAGTCGGTGGCTTTGGCGAAAAGGGAGCTCTATCCTCTGTCGAATGCTACAACACTAAACTCGAGAAATGGGCATCCCTCAAGCCGATAAACTTCGCGCGTTTCCAGGTCGGGGTTGTATCTTTAAACAACTCTATCTATGTCATAGGAGGCAGAGATAACTCCGACACCTTGACAAGCATCGAAGTGTTTGGGCCCAAAGCAAAAGCATGGAAAGTTTTAGACGGCCAGTTGAATGAAGCACGCAATGATTTCGGGGTAGCTGCTCAGGGTaatgaaataatttgttttggtGGAAGAGGTGTGAAATCCATCGAGAGCTTTAACGTAACAAGCGAAGAATCGAAGGTCGTTGGGCATACGGGGATCAGCACCTTTTCCATTGACTGCTTGATGTTTCCTGCGATGTAGGGTGGATGGTAGTAGAGTGAGTTTTTAATCAAAGTATGGTATGTGGTAGACTGAATGAGTCTTAGATCTATTAACGCACTGAATGCAAGAAATGCACATGACTTTAAAATGTATAAGTCTAGTTCAAAATGGATTTAAAAGGATTGAGTCGCACTAAATTTTGCAATCTTCATGTTTATGAGTAAAACATGTTGTAGTTTCAAATAGTACCCACAAGGAAGAAAaggggaaaaacaaaaacaaatggaagcagatgtaaagaaaaaaggataaaaagaaaggaaggaaaaataggaagcaattaagaaaaaaaagacgTTGAAAGAATTATAAGGAAataagggaaggaaggaagaaggaaagaaagaaagaaagcaaagtaGTCGATCTGTGCAgtccaatatatattttcttcatcttcattatATGGCAACCACACACGGTCTAACAGGCAGGTACATCACACACTCACACAAATAGAAGGTTAGTCGATAGCAATGAAAACCACCAAAGTTGATCAAATAAAGACTGGAAAGCAACCTGGCGTACAATGTTgtaggcaatcgatgttgcaagcCATGTCACAAGACGCAATTttttgcacgcaatgttgccgaagtagaaaacgattctacttcagcaacattgcctgcaacattgcgcgcaattttGCACCGTATGTCTGCGCCTGAATCAACCTTGCAAGCACATCATTATAACTCTATTTCTCCTAAAttaaaaatacagccaatgCATATTGCAATCCTTGTAATTGGCGGTACTGATTCCATCGTTTCTTGTCATCGTGCAGTGTTTGTGGCTCAATggtgaaatatataaatagttATGCCGTCTCACGGCACACCATGGAATGTCCTATTTAACACTTGGATTTTCTTAGTAATTACACACTTCGAAAGACTCATGTGCATAGTAGAAGATATAAGAACATCGTGGGATTTTCCACAGTATTCCGCCATTGTTTAACTGGtagaatta

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9NXS3	Kelch-like protein 28 OS=Homo sapiens OX=9606 GN=KLHL28 PE=1 SV=2
Q5R7B8	Kelch-like protein 20 OS=Pongo abelii OX=9601 GN=KLHL20 PE=2 SV=3
Q9CR40	Kelch-like protein 28 OS=Mus musculus OX=10090 GN=Klhl28 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002358 (this species only)
Transcription factor family	ZBTB · all TF in this species
Ubiquitin family	E3\|E3 adaptor Cullin RING\|BTB · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF07707 all species →	BACK	BTB And C-terminal Kelch	Domain	Interproscan
PF13964 all species →	Kelch_6	Kelch motif	Repeat	Interproscan
PF00651 all species →	BTB	BTB/POZ domain	Domain	Interproscan
PF01344 all species →	Kelch_1	Kelch motif	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000210 all species →	Domain	BTB/POZ domain	Interproscan
IPR006652 all species →	Repeat	Kelch repeat type 1	Interproscan
IPR015915 all species →	Homologous_superfamily	Kelch-type beta propeller	Interproscan
IPR011333 all species →	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR011705 all species →	Domain	BTB/Kelch-associated	Interproscan
IPR017096 all species →	Family	BTB-kelch protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45632 all species →	LD33804P	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10461	KLHL24_35; kelch-like protein 24/35	-	Ubiquitin system	ko04121	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.