Gene detail

Detailed information of ENSOJPP00000016532.1 in Anthopleura xanthogrammica

Genomic Location: not available for this species
NR annotation: XP_031561824.1, uncharacterized protein LOC116297689 [Actinia tenebrosa]
Species abbreviation AXANT · all data for this species · gene families

Sequence

CDS

ENSOJPT00000019155

atgatttgTTTCAGATCATTTGGTATTTCATCAGGAAAATTGGATGTCTTTGTGATACTCACTAGTAATGAAGGAAAGGAATATTTACTTTCGCCTGCAAATGATGACTCATATGGGGATTGGCTGACTAACTTGAAgAACAAAATGAATAGATCCCCATCTCCTTTTGAGCGATCCAGTCCTGGCCAAGGTGGATTCATGAGCCGGgTTCGTAATAGCctgagaagaaagaagaagctTGATCGCTCAATGTCTGAAGATGTCACAGGTAGTTTCAGAAAAGGCTCCAATCATTGCTTCTTCAGTCACAAAAGAGACGAAGCCAGTGCTTATTTATCAACCCCAGAGACAAAACGCAAAACccttgaaaatatcatcaatgaatttagaaaagaaagatcCCACAGTTATCCCTGTGAATCTGAGGACGACAAGAAGAATGACATAACTGAAACAACTTCAAAGGTCAAAACGTATGCTGACAAGGCTTGTGATACGTCAAGTCTAGTGTGTTTAGACTGGGTGATTACTGATGGGAGTGAGGATACTGCTGACGGCACGCTTACCAACAAGCCAGGTTATGTAAAAGAACCACGgcaaaactcaaaaaaattaCTCAAAGCAGTCGGGATAGATTATAATTTGGAGCAAAAGATGGACAGTACTCAGAAGGCAAATTCTGCAACAGTCAATCAAAGCCTATATAGTCAAGGTCTCTATGGGCAGATGGACAATTTGgagggacagacagacactaCACATAAGGAAGGTACTgtacctgtcaatcaaaACAGTACGGAAGAAGAGACCAACAATGTTTCACCTGTTCATCGTGAAGTTCTTCAAGGACAGGCAGACAGTACTGAAAGGGAAGGTGCTTTACCtatcaatcaaagtgttacaggacagacagacattaCTCAAAGGCAAAGTACTgtacctgtcaatcaaagtgttacaggacagacagacagtatTCAAAGGCAAAGTACTgtacctgtcaatcaaagtgttacAGGACAGACGGACAGTATTCAAAGGCAAAGTACTgtacctgtcaatcaaagtgttacaggacagacagacagtatTCAAAGGCAAAGTACAgtacctgtcaatcaaagtgttacaggacagacagacagtatTCAAAGGCAAAGTACTGTActtgtcaatcaaagtgttacaggacagacagacactaCCCAAGGGAAGACATCTTCTTCTAGAGACAGTGAATCAACATTAGAGACTGGACAAGTGGATGATAATTACCCAGCAGTTCTTGCCGAGAGGACAAACACTTCTCAGACACATAAACTTGAGTATAATTCAGACATGGACTTCAGGGCCGACATGTCTTTACAGCAACAAAAATATATTCGTGATCTGGATATAGAAGTCTGCAAACTCAAATGTGAAGTCATAAGTCTTATTCAAGGGACCATCAAAGTGCCTCTCAAAGATGATGACCTCGCTGACTGGCACTACGTGGAAGAAATTCGGTACAAGGATCGCATCTTTGAGCTCCTAAGAGAAGCAAGACTGTACAATCCCAGCCTACCAGACCTTGACAGTTCCAAGTCTAGTAATTTCAAGGATGTTTATGGCTTCATTCACGGCACTCGTGAAAGTGAAAGTGTGGTCTTCCATTTCGTCTGTCGAGAACTAACCCAACACTATTCCAGTGTCTTCCAGGTCAGCTTCATTATTGATTCTATAAAGGCCTCAAAGAATAAACTCAAGTCCGAAATGAGCGAAGTTGAAAGACAAATAAGTTGTGATCTCCTGCGAACGATGCCAAGTAATGAGCACTTTAAAACTCTCGAATCCGAACCGGTTGCCCAGTTATCGCGTATCTTACACGTTTTCGCGGAACTCCGACCAGACATTGGATACCTTCAATCAaacgttttcttctttttttctaggtCGCTTTACGCTGTAGTTGATGTTTACCTTAAGAATTATTTTGATAAGATGTTGAGTGGGGTTCAAGCTGATcagGAAGTCTTAAAAGAGCTCGTAGCAGAGAAGCTTCCAGCGCTCAACGCTCACCTCAAATACTACGGTGTCGATATCTCTACCGTGACATTTAATTGGTTTATCACTGTTTATCTCGACGCAGTACCTTTTGAGACAGCGGTTCGTATATGGGATAGCTTTCTGTTCGAAGGAAGAGAGGTGCTTTTCCGTATCGCTATTGGTCTACTGAAGCTACAAGAACGATCTTTGCTTCAGTTGTCTGGACATTTGGAGATAATGCAGTACATGAAGCGAGCTGCAAGGGTTATGTATGACGTCGATAGATTATTCAAGGCGTCATTTGAGGAGATGACAAAGTTCCCTACAAATGAAATGCTGGACGAAAAGCAGAGGAAGTATCGAACAGATATCAAATCCAAGCATGACAACGTGTCTCCTATCAAGCATGAATCTAGTAGATTGCGAGTGAGTTCCTTTATTGTCGAGCTGCCAAGTCAAGACAAGTTGGATCGGCTTGATCAGCATCAGATGGTTGAGTGTGCTGTTGCAACCACTAAAGATCTTTCAGGCCCCGTGTGTATTCCATGTAGTGTTCGCGGCGATGCTAAAGTTTATCTTTTGGATATCAACAAAAAGGAAATGCGTACGTTAGACGCCCATATTAATTCTCGTATACTGTGTGCTGATGTACTGGAAGACGGTACTGTTCTGATTGGTACGGTATTCTGGTGTGTGTATGCATTCGATATTGAATCTAGAATGGAGATCTGGAGTGTACCGCTGAGAGATTCCGTTATCGATTTGTGTCACTATGATCACGTGACCGATGACAAGGTGTACGCCGCATTGGCTGATGGGTGCATAGCCGTTTTACCGAATGCGAATAGTTCGGGTCCACCGTCTCAAGGATCACATGTTCGTATTGGTTTAGCACCTGTGATGTGTGTTACCATGGTGGATGATAAAGTCTGGTGTGGATGTGGTAGCAATGTGGTAGTGCTCGATGCAAGCTCCCTGGAAGAACTTCATGCCACGGTCGTATCGTCTTCACCTCGTCACCAGGTCGCTCGCCTTCTCGAGGGGAATCATGGAGTATGGTGCACTATACGAGGGTCATCGTGGGTAATGCTGATAGATCAGAATTCCTACGATTTCTTGCTGAAAATCGATGTTGCTCTTGACACGACAATTATAGATGCTGTTAGCGAGTCGCAAGTCACCGTATCCCCATTTCAAGAATCTCGAATCACAACCGTCATGCCATTCGCTGATGAATTATGGGTAGGATTGGGTAACGGTCAAGTGCTgatatttgatttgattgagAATGAAACTTCAAGCGAAGAAGAAGACTGGGTCGAGAGCAGTGATTCACGTGATCAAACCGAAGATGAACGGGAAAGTCAGAGTCGGTATCGCGAACGACCAGAAATGTCTGACAAAGCAAGCAACGAGTTTaagttttctttgaaaatgaGAGTACAATATAGAGTGAGCGAGGAAGCCATCCGATCACTCGAGATCTTACTCAACAGAGAAACTGAAGATCCAATGGTCCTGAGCTGCGCCAGCACGCTGAGCCCAGAAGGAGGTCTTTCTATTTGGCAAAAACAAGCAACTCAAGATggTTTAAATGAATGGCTGAATTATCCTATAAGGCATTCTCAGGCATCAGATGATAAAGTCTTCAAGGGATAA

Transcript

ENSOJPT00000019155

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
B1AVH7	TBC1 domain family member 2A OS=Mus musculus OX=10090 GN=Tbc1d2 PE=2 SV=1
B5DFA1	TBC1 domain family member 2A OS=Rattus norvegicus OX=10116 GN=Tbc1d2 PE=2 SV=1
A6QP29	TBC1 domain family member 2A OS=Bos taurus OX=9913 GN=TBC1D2 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003157 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19056 all species →	WD40_2	WD40 repeated domain	Repeat	Interproscan
PF00566 all species →	RabGAP-TBC	Rab-GTPase-TBC domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000195 all species →	Domain	Rab-GAP-TBC domain	Interproscan
IPR050302 all species →	Family	Rab GTPase-activating TBC domain-containing protein	Interproscan
IPR011047 all species →	Homologous_superfamily	Quinoprotein alcohol dehydrogenase-like superfamily	Interproscan
IPR035969 all species →	Homologous_superfamily	Rab-GAP-TBC domain superfamily	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR001849 all species →	Domain	Pleckstrin homology domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47219 all species →	RAB GTPASE-ACTIVATING PROTEIN 1-LIKE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K16727	ARHGEF10; Rho guanine nucleotide exchange factor 10	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.