Gene detail

Detailed information of ENSOJPP00000016668.1 in Anthopleura xanthogrammica

Genomic Location: not available for this species
NR annotation: XP_031562024.1, polycystic kidney disease protein 1-like 2 [Actinia tenebrosa]
Species Anthopleura xanthogrammica · all data for this species · gene families

Sequence

CDS

ENSOJPT00000019297

ATGTTAGTTAACAACAACACTGTTGCTACGGACGACCCGACAACAGTACCTCGGTACACAGTTTCAGCGGTAGTTTACAAAAACATTGAGCATGCGTCGATGAATTACCCTGTTCTGTCTGCCGTCTGTGGTGTCTTTCTACTTTACGTGCTGGGCTTGCTGTGGATTAAGAGAATCAGATCGAAAGAACAAGTGCATATCGGAGCCACTATAATCCCACACAGGTCATTCTATCGCCATCCACATCATTACTTCCTGTTGTTCTACACCGGAAGTGGACGCCATGCTGGCACTACCGCCAACGTGTATTGCGTCATTCATGGGAAACAGAAGAAAACGAAACCTATAGTGCTTCGCGATCCCGAACGACTGCTTTTCCAGTCAGGAACCACGACCTCATTTTTATTGACCCTGAATAAACCTTTGGATCAAATAACCAAGCTTCACTTATGGCACGACATCAGTGGACCAAAACCTTCGTGGTTTCTCGAAAAAGTCGTAGTCTGTCACTTAAATACTGGTCTGTTGTGGCATTTCGAGGCTCACCGCTGGCTTGACGTGTCCGAGAATGACGGCTCAGTCGAGTGTATTTTACACGCGCTACCGAGGTCGAATTTTTTGCGAAGAAAAACTCTCTTCGAccaaatgttttcaaaaagctTTAAGAATAACAACATTTGGCTGTcccctttctttcttaaaaataGGACAATGTTCTCTCGAGTCGAGAGATTTACTTCTTGTTTAgctgttaccatggtaacagtTCTCGTTGTTACAGTCGCGGTTGATTCCAGAAAAGATGGCGATATTTTCCCCACCAAGAAGATTAATCTCGGTCCAATGGCTTTCCAACTGAGCGACATCATTTGGGGAATTATCTGCAGTGTCATACCTTTCTTCTTGCGTCTTCTTCTCGAATTTCTCTTCACCTACTCAGAGAGCAAATTCAAGCAGCTCCCACCAGACGAGAGAGATGTAAAAACACACATTGATTGGTGTCTGAATAAAGCTAACGAGATAACGTTCCTTGATGGCCAATCCAACACGCTTGACgATAGTTTACGAAGTGAAAGTGATTCGGAGTACTTGGCGGAGTCATGGTCTGAAGTATCGTTACGGAATATTGGTCTAGATTTGTCCAATCAAGACTGCGTCTCCGACAATCAGAATGAAAATGAGAGAGTGGGATCAGAATTGCACGGTGTTACAAAGCCTGATTCTAATCTCGATGCCAATTCTGACACAACGACAAACAAAGGCACTGAGCTCGAAAATCAAGGTGAagtcaaagaaaatataatttctccCTTGATACCTAATGAAAGTGGTAGCTCGGCCGTCGAACAAGCTGAGGATGAATTATCAACAACGCTAGatacagaaaatgaaaatcgaGATGACATACAGTTGATGAAAGAGGAAGGTCCTCAAGTGATACCCAATGGTACATGTAAAACTACTGCTGAATCAAATCTTCAGTCACCAGAAAATGTACAACAAAAGTACAGTCAAGAACCTATAACAACTAATGGACAGTGTTTCAGGGGCGTTTTAAGGGACAGCGAAAGTTTGTTTGAAGAGGGAAGGATGTCAACTTCgagtaaaaaaatagaaactcATAGAAAGGAAAGTCCAACTGAGCAGCTAAATTTCGCTTCTACCAACTCCTTGACTAATACCGATAAAATTCCTAAACTCTGGAAAATGATTCCGTTGCCTGGCTTTCTCATCGACCCAAATagcataaaaataagaaacgaGAAAATCACGCTTAAACTTTCTGTCAAGTATTTTAATTTCgcagtgtttgtttgtttaacgTTCTCGATTGTGTCTTCAATCGTTACCATTAAATCCGGTCTTTCCTGGTCCAGTCAGATCACAATCTCCTGGTTAATGACGATAGCATTTGCCCTCctctttcaaatatttatagcAGAGAGTTtctatatgttttttcaagcgATATACTTTGGTGTTTACCTTCAAAGGCCGGTCGAGgagaatgacgtcatcaacgAACAGAAAAACAAGGTTTGGGCTAAGGAGGAGGATGACGTCAGATATTACGTTGATGATTTGGATGACGTAAGCTCTTTGGTTCCCAGGCCACCTAGTGCGGAAGAGATCAAAATTGCGCGGGAAAAAGCTGGGCAAGATCGCCAGCTTGAAGAAGTCCTGACGATGGTGGCGTTTGATATCATATTTTTGTTGCAACTCGTTATTATATCATTTGGGAATAGAGACGCCTGGTCTTATCCAATGAGGACTGTAGTGGAAACTAACTACAATATCGCCAACTTTTCCAACATACAGAGTGCCAAGACCTTTTGGGGCTGGACCAAGACCCACCTGGCAACAGGCTTATATTACGAAGGAAAATTCAAGCAAGCTGGGTCCCGTCAAACAAGGGATGGATATGGAACTTTATTGGGTGTCCCAATTCTAAGACAACAGCGCATTAAACCAAATGACTACTCAATGTACGCAAGGATTGCGTCTTATGAATCGGGTGGTTACATAGCGTCGCTAGGTTACAACAAATCCACGGCTTTGAAAATGTTGGAGGATttggaaaaattgaaatggATAGATCGATTTACTCGAGTGGTTTTTATAGAGTTCGCTTCTTATAATggaaatatcaatattttatccGACGTAGCACTAGCTGTTGAATTCACGGCCTTTGGAGGCGCGTTCCCGAGATTTGACCACTTTTCGTTCCGTCTCTACCGTTATTTCACCTCCTTGCAACTAATATACCTCGTCTGTGAGGTCATTTTTATCGTATTTATCGTCCAACTGATGTACAAAGTCTCTTGTGAAATCTACGAACATAGATTCGCGTATTTTTCCTCGTTTTGGAACATGACAGATGTAGTTCTCGTCGTCTCTTCCCTCGTGACTATAGGCCTCTACGGCGCACGCGCAATACAACTTCAAAACGGAGTCAAAGCCATCCAACAAAATCCTAAACTTTTCTATGGCTTCTACCCCATCGCTGTCTACGACGACCTCGTTGCTTTCATGTCTTGTATAGTGGTCATAGTACCTGTCCTTCAGTTCctcaagtttttgaaattcaacaaAAATTTTATGATCTTCGACTTGACACTGAAACTTCTCATTCCTGACCTGAAGGGGTTTATCCTGATTTTCATGATCAGCCtcttcgccttcgccttctGGGCCTTCCACATGTTGGGGACGGCTCTGGAATCGTACAGTACCTTTATAGGAGCCTTCAACAGTGTTCTCTCTATGTTGTTAGGGAAGTTCAGCTTCAGGTTGTTCGCGCCTGGCGAGTCCCAAGAATTCGGGCCACTTTTCACTTACGTTTTTACCGTGGTCAATGTATTCTTCATCATGACTATAATCTTGTGTATAATAACTATGGCGTTCACAAAAGCCAGGCAGGACAAATCGATCACGAATAAGTACGAGATCATAAAGTTTATAGTGGGTCGAGTCAAGGATGTTCTTGGGTTAAATCCTCCATATATCCCGCCAAAACCGGTCATTAAACCTTTAATTCCTGTTGATTACAATCAATTGCAGCTAGAACTCAATACGCAGTACATCTTGGGCAGTCAAATGTCTAGAATTCTGAGGTTCGCTAACGTGGTGTATAGCGAGGAAGCAATCGACGACGTTGAGATTCTTGAAAGAATTTTAGGGTTGGAAAACGGTTTATCGAGAAAACGAGACAGAATTATACAAATTGCTTGCTTAAAAATCGGTAAAGATGACACCCAAAAAACCTGGATGAGGTACATCAACCCAGAGATGGACACCGAATATTTGAAACGAGCGTTTCCAATACATCATATTTCTCCAGAATTTTTGCAGGAAAAGCCGCTTTTCAAAGATGTGGCAGAGAGCTTTTGCGATTTCTTAAAAGATGTCGATTATCTTGTTGCTCATAATTGTGTGTTCGACTGGGACATGTTGTCTAGGGAGTTCGAAATTCTTGACCAAAACCAAAAGAAGGACGAAAACTCAAGAGAACATATCTCTAAACTATGGTGGGAAAAATTTCATTATGACAGTAACTGGGTGGATACTCTTCGCTTAGCTATGATCTGCTTTCCGAAACGAGACACTTACAGATTGCAAGCTATTAAGAACTTCTTGAACATTGAACCCCAGCAGGGGATAGATGGGGAGGGTTTGTCGCAGTGTGATTATGGTGGAGATGAATggaagcaacaacaacatgatGCAATGTATGATGTATTTACAACCTATGGCGTCCTTCAACACTGCATCAAGTCTACCTTTTATGACCTATTGCAGAACTATCCTATGGCATTGCTTGATACCAATCTACTGCTTGACATGCAAAGACTAATAGATGAAAACAGAACCAGTAGTGAAGATCTCCTACCATTTGCCCAAAGATCAAAGGAATACTTCACCACTTCAAGACCGAAGGGTAAAAAGCTTGGTGAACTTTCAAAGTACTTTTTACAGATGCTGACAGTTTCTCTAAAGGTTGACTCAAGATCTGATGATAGAGTTATCTTGATCTATGATGCTGCCATTCTTGAGCCATTGAAGAATGAAATGGTATCTCATTCATTAGCTTCGATGAAGGAAAATgtagaaaaagaggaaaaagttgaagataaaaaggaggaaaatgaagaaaaagagggaaaagtggaaaaaatggaaaataagaaagatgaatatgtagaaaaagaagaaaaaatggaagatAAAAAGGAGGAGTCTTATTCCTTTACGTTTGGATTTATTAAGCTCAAGATGGCATTAACACGCTCTTTAATTCGTTTATCAAGTATTAGTAGCCGCGTTTTGGTTCAGGAAAGCTCAGTTTTTCGTGTATCAAGAGTTATTGGTGGTTGCTCAGTTTCAAGACTGGAGTCAAATCTATCACCTAGAAGAACGAAGAAACAGGAACAGGAGGGCGAGAAAAAGGAGGAAACGAATCTAACTCAGGTCCAAAGGCTGAAGAAAGTGTTTGCTGAGTATGGGTCTACAGCAGTGGTATTCCATGTTTGTATATCTCTAACCTCTCTGGGAATATGCTATACTGCTGTTAAAAgTGGTCTAGATGTTCCTGCAATGCTGCAGAAAATTGGTCTCAGCCAAGGACTTGTAGATTCTGCTGTAACTAAAGGAGCCAGTACCTTTGTTATTGCTTATGCATGCCATAAAGTGTTCGCACCTGCCAGGATGTTTATGACAATAACATGCACACCTCTTATTGTCAGAAGGCTACGTATCATGGGTATTCTAAAAGCTCCAATCAAACCAACCTCATAG

Transcript

ENSOJPT00000019297

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A2A259	Polycystin-2-like protein 1 OS=Mus musculus OX=10090 GN=Pkd2l1 PE=1 SV=1
Q9P0L9	Polycystin-2-like protein 1 OS=Homo sapiens OX=9606 GN=PKD2L1 PE=1 SV=1
Q9D8B6	Protein FAM210B, mitochondrial OS=Mus musculus OX=10090 GN=Fam210b PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0009867 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF20519 all species →	Polycystin_dom	Polycystin domain	Domain	Interproscan
PF00929 all species →	RNase_T	Exonuclease	Family	Interproscan
PF01477 all species →	PLAT	PLAT/LH2 domain	Domain	Interproscan
PF06916 all species →	FAM210A-B_dom	FAM210A/B-like domain	Domain	Interproscan
PF08016 all species →	PKD_channel	Polycystin cation channel	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR046791 all species →	Domain	Polycystin domain	Interproscan
IPR013520 all species →	Domain	Exonuclease, RNase T/DNA polymerase III	Interproscan
IPR001024 all species →	Domain	PLAT/LH2 domain	Interproscan
IPR036397 all species →	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR051223 all species →	Family	Polycystin	Interproscan
IPR012337 all species →	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036392 all species →	Homologous_superfamily	PLAT/LH2 domain superfamily	Interproscan
IPR009688 all species →	Domain	Protein FAM210A/B-like domain	Interproscan
IPR013122 all species →	Domain	Polycystin cation channel, PKD1/PKD2	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10877 all species →	POLYCYSTIN FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0005262 all species →	Molecular Function	calcium channel activity	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0050982 all species →	Biological Process	detection of mechanical stimulus	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOJPP00000016668.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.