Gene detail

Detailed information of ENSOJPP00000016747.1 in Anthopleura xanthogrammica

Genomic Location: chr11:6058530...6073126
NR annotation: XP_031568358.1, G-protein-signaling modulator 2-like [Actinia tenebrosa]
Species Anthopleura xanthogrammica · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

ENSOJPT00000019380

CTTGAGACAAGAGCTTGTCTAATGCCGTATGAAACTTGGTGGTAAAAGGGGGAATCTTACCATAGTCAAACTTTTGGGAGACAGGGCAGCCCAAGGTAGAGCTTGTGGAAACCTTGGCAACACACATTACCTGCTGGGGAATTTTGACTTGGCAATAATGTTTCATGAGGAGAGATTAGCTATTGCTCGAGAATTTGGTGACAAATCCGCTGAAAGACGAGCGTGTAGTAACCTTGGCAACGCTCACGTTTTCTTAGGAGAATTCGAGATAGCAGCAGAGTACTACAAGAGGACACTACAAATATCAAAAGAACTCGGCGATCGTGCAATTGAAGCACAGGCCTGCTACAGTCTAGGGAACACATATACTCTCTTGAAGGAGTACAACGATGCAGTGGCGTATCATATCAAGCACCTGGCGATAGCACAGGAGTTAGGGGATAGAGTTGGTGAGGGTCGGGCATGCTGGAGTCTAGGCAATGCCCATACAGCTTTGGGTAACCATGAGTTGGCCTTGGAATATGCTCAAAAACATTATAATATTTCGAAAGAGGTTGGAGATCGCACAGGTCAGATTACGGCACAGATGAACATTTCTGATCTAAAGGCACTGCTTGGCATTCAAGACAAACAAACACCTAACGATGCTGAAAGTGAAATCAGTGCAGCTGAACCAACTCAACGAAACTCGAGTCCTGGATCGATCAAACAACTGTTCCGTAAACACAGCAAATCTGATTCAGAAAAGCGTAAAGATGGGCAGGGAAAAGATCAAAGTCGTAAGTTTCCCGTAGCTGGAAGTTCACGGCCAGTTGATGCTGCTCAAGTTCAAGTTAGAGTCTCGTCAAATCAGGAAAGAGGGCCTATTGGTGATTCTCTTGATGACAGTTTCTTTGACATGCTAAGTCGATATCAAGGGCAGCGAATGAATGAGCAAAGGTGTGACGCTCCCAGTGAGATGGAAGAGAAGAGTAAAAGTGCAGATGACTTGTTAGAATTGGTTGCAAGAATACAAGGAGATCGAATGGATGAACAAAGATTTGAGCTTAGAGACCCCGAAGATACTGTGGATACAGCCTCTCAAAGTAAACCGTTAATTAACTTGAAAAAAGACGTGCAAGGAGCCATCTCGGATGATTTGTATGAAATCGTACTGCGAAGTCAGAAACATCGTATAGAAGATCAACGTAGCGAACCACCTCTTCACAGACAGGCCCCTACAGTTCCAGATGAGGATTTCTTTGGTCTTATACTGAGACTTCAGTCAAACAGAATGGATGATCAGCGATCTTCTCTACCTGGTAACACCAATCGTTATAACCATAAGTAATTTTGAGCAGTTGTTCACTCTGAAAATTATCTTTTGAATCAGTAATGTTGAGAAGTATAGCTTGATCCTCAAAGCTGTAATATAATGGGGATGTAAGCAACCAACTAACATCTAACTGTGAAAGGTCCTCAAGGATAATTATTGATCTTGGTCAATGGTTTTCAAATGCTGAAGAGCATGATATAGATTAAAATTTACAGAATGTAATATAGCTAGGATGTAATGTAAAAATGGATTCCCTCAGCCAGCAAGCAATAGGTAGACCAGCTTGATATGCTGTCTTTTGGCAATAGTGGTATAATAACTGTCTCTTATAATTTTCCTGTATTTCGTGGATTTTCTAAAACAACTGTTGCAGTAATTTGATGATTTAGATTTAAGTTTATTATGTGGAAGAAtacctttatttttttaggaaatgAACTGgcatataattatattcattccttcattttacCCCCATGACAAAAAAAACCACGGCATTTTGCACATAGAATTTAGTGTGTGTGTGGAATATATTTCATCCTAGTTTAGACTGTCATGTCCTGCAGAATGGGTTTTTAACCTTTGTTTTTTAAGTCAATTCtaatcataaattattttggTGTGTGAGTTTATCCTGATTAAATTGGGAACTTTGATTCAGAATTTCCAAGTTGGTTCAGATAGGAAAAACTGTGCCCTTGGCCTTGAAAAGACCTGCAATATATTCATGACCTTAGTCAAAAAGTCTCcacatttttttctatctgGATCTCCTGGCCAGTAAATAACTCCTATATCCATTGTATACAAGTCATTTAACTTTCAAGAAATCCTGGATTTGCTTTTGTCTCCTctttaaagaaatttaaaaccaTCAGGATGGAGTTCTTTTCTACTACGGCATTATATTTTGACTTTAAATTTATTGCAATGGGATATTTTAAGCTTATGGTGGAGTAATACAACATTATTACCTGTCAAAAGTCCATTACAGTAGAGTGTACacaataatca

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6IR34	G-protein-signaling modulator 1 OS=Mus musculus OX=10090 GN=Gpsm1 PE=1 SV=3
Q9R080	G-protein-signaling modulator 1 OS=Rattus norvegicus OX=10116 GN=Gpsm1 PE=1 SV=2
Q86YR5	G-protein-signaling modulator 1 OS=Homo sapiens OX=9606 GN=GPSM1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002584 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13424 all species →	TPR_12	Tetratricopeptide repeat	Repeat	Interproscan
PF02188 all species →	GoLoco	GoLoco motif	Motif	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR019734 all species →	Repeat	Tetratricopeptide repeat	Interproscan
IPR003109 all species →	Conserved_site	GoLoco motif	Interproscan
IPR011990 all species →	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR052386 all species →	Family	G-protein-signaling modulator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45954 all species →	LD33695P	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0030695 all species →	Molecular Function	GTPase regulator activity	Interproscan
GO:0000132 all species →	Biological Process	establishment of mitotic spindle orientation	Interproscan
GO:0001965 all species →	Molecular Function	G-protein alpha-subunit binding	Interproscan
GO:0005092 all species →	Molecular Function	GDP-dissociation inhibitor activity	Interproscan
GO:0005938 all species →	Cellular Component	cell cortex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOJPP00000016747.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.