Gene detail

Detailed information of ENSOJPP00000017096.1 in Anthopleura xanthogrammica

Genomic Location: not available for this species
NR annotation: XP_031565183.1, uncharacterized protein LOC116300447 isoform X1 [Actinia tenebrosa]
Species Anthopleura xanthogrammica · all data for this species · gene families

Sequence

CDS

ENSOJPT00000019754

CCGTACCCACTTATCGCAAAGACTGTTCGTCTTGTGCCAGAGAAAAAGGATAACATTGGACTGAGATTGGAATTCTATGGCTGTCCTTCAGATGAAGCCTATGGAAATTGTAGTCAGCCCCTTGGTCTAGAAACGTCTGCTGTCCACGATGATTTTATGACAAGCTCAAGCCATCATCTCAATAGCCCACCCCACAACGCACGGCTTAACATTGACCTGGTATCTCAGCATAGCTGCTGGTCACCGGATTTTCACGATACATACCCATGGCTGGAGATTGATTTTAGAAGTAATATGACTCGAGTCACAGCGATAGCGATACAAGGAAGAGGAGACGATGAAGTTGATGAGTGGGTGACTAAATACGCACTGAGCTATGCAGAATATCAGGACAATAACTTCACTTActacaaagaaaacaatataagAAAGGGAAATGAAGACAAAGCTTCGGTGGTGAAAACTACACTCGATCCGGTGATTGTTGTCTTTGCCTTGCGAATCCATCCACTTGCATGGTACAACCACATCTGTATGAGGCTGGAGATCTATGGATGTCAAGCAAACTCTAGTTACACAGCGTGGAGTAGCTGGTCTAATTGCACTTCTTGGTGTAACGGACTTCAAAACCGAACTCGAAACTGTATGAGTTCTGTTCCACGAAATTGTCCAGGACCTTTAGTTGAATCCAGACGATGTAATATTGAAGCTTGTTTCTCTTCTTGGACAGAGTGGAGTGAATGCAATCAGACCTGTGGCTCAGGTGTTAGGAATAGAACAAAATACTATTTGGGAGACAGATCCTCAAACAAGACGTGTAATGGAAGCTTGACTGTAATAGAGGAGTGTAATATATGTGATAAATGGACTACCTGTAATATGACTTGTGGAATTGGCTTTAAGACACGTAGAGTCAATTGCACCGATCTCAGTCAGTCATGTAAAACACAAATGAACCAATGCAACCAAACTAACAAACCAGGTATTGCTAACTTCGAGATCTGGTCGGAGTGGAGTGAATGCACATCGACTTGTGGTGGCATTTTCTACCAAAATCGCACAAGATACCCGAGGCCTAGGAGTAACGTGAACAGTCTCGTATATAATCCTGAAGTAGAGAGCAAAGAATGTGACTGTCTTCGTAATGAAAGCTGTAACTGCAAATGGAGTAACTGGACCATTTGTGATGCTACGTGTGGTGGCGGCGTTCAGACACGTGTTTTTAACTGTTCCTACACAACCTTGGGTTCTGTTAACTTGGTTAACTGTTCGGGGTCGATTCATGACACCAGGATATGCAATAACTTCTCTTGCCCAGTCGATGGCAAGTTTACTGAATGGAGCAGCTGGAACAATTGTACTGCGACATGTGGTAATGGAACACGACAGCGCATGCGTAACTGTACCAACCCACCACCAGCCCATGGAGGAAATAACTGTACTGGTAACACAACAGAGATTGAAAAGTGTGGAACCAAGCCCTGTCCAGTCGATGGCAACTTTACTGAATGGAGCAACTGGACCAATTGTACTGCGACATGTGGTAATGGAACACGACAGCGCATGCGTAACTGTACCAACCCATCACCATCCCATGGAGGAAATAACTGTACTGGTAACACGACAGAGATTGATAGATATCATTCACagttacttttttttttaaatcttcttttatccatttttaattttaagaaGTTTATAGTATTCGATGGAAATTTTACTGAATGGAGTAACTGGACCGCGTGTAGCGTATCATGTGGTAATGGTACACGACAGCGCATGCGTTACTGTACCAATCCACCACCAGCCCATGGAGGAAATAACTGTACTGGTAACACGACAGAGATTCAAGGATATATTCCTATCAATGGTAATTTTACTGAATGGAGTCAATggacaaattgcactcaaacGTGTGGTACTGGTACCCAAGAGCGCATGCGTACTTGTACCAGTCCACCACCAGCCAATGGAGGAGCCAATTGCAGTGATCACACTAACGAGACACAGAATTGTAACACTCATCACTGTCCTATTCAGAGACGACGATGTATTTCCCGAGGCCTAGCTCTTGTTTCCCGCTGTGAAATGAatgcctttttttttaattcaccGGGCAATAAATGTAATGAAATTCATGGAAATTGGACATCGTGGTCTGATTGGTCTTATTGTAACAGACCGTGTGGTATGGGGTATGAGAACAGTACAAGATCGTGTACAAATCCAGTTCCAATGTATGAAGGGAGAAAGTGCGAAGGACCAAGCAACAAATCGAGAGCATGTAACAATTTTACTTGCCCAGCTGCTGAGGTGCTTGTTGCAGTACATTTCACCAAGGAAAACTGGACTAATGACCTGAAAGATTTAGACAGCGATGCAAtatctttttcttttagcaAAGGAAGTGTCATGTCAAATTTCACCATATTCTTTAGCAAGATGGATAATCTGCAGTTGGTTATATTACAAGAAAGTATGCAGGTTACTGGATTACTGACTACCATGCCTGTGCGGAACACTAATTTTAACACGACTAACgTTCCAAGCTTAAGCCCAACAATACTGGCCATCAAAAACCAAACTTCAACTTCAATCTTCATGTCATGGACACACGTTCCCTCAATCTATCTCAAGGGCAAAAACTTAAGCGGATACagtatattttataaagaaaaacaagccgAATATTTACCAAACCAATTGAAACCAGTGACACCAGATAAAAATAACACAGTCGTCGATGGAATGAAGAAGTACACTGACTACTCTTTAAGGATTCTGGCATTCACTGAAAGTGGCAATGGTATTGCCAGTGAACCCATCGATTTTAGGACCGAGGAAGATGTGCCTTCTGAGCCTCCTTCTGAGTTTAGTGTCACAGCTCGCAGTTCAACAGCCATATCTGCTGAGTGGAAACACATTGATCCAGCGTTCATTCATGGAATCCTACTAGGGTACAATGTCACAGTCACTAACCTGAATTCTGGAGAAATGAAGTTTCAACTGTACGGCCCATCCCATAGTTATTCATTGGTAGAGAATTTAAAACGATATACAGATTATTTGGTAAAAGTATGTGGCTACACATCTAAGGGTTGTGGAGTGACGGCAGAAGACCGTATAAAGACCCTGGAGGAtgCCCCAACCAAGCCACCAAGAAATGTCAGAGCATTGAATCTCTCCAGTACCTCTGAGTTAAAAGTTTATTGGACATCCCCTGAACTAGACGGGATAAACGGATTGCTAAGAGGATATACCTTACAATACAAAATCAAATCAACGTCGGGAAGAGAAGTGCAAGAAGCTCGTGTCATTGAAAAGGAGTTTTCTTCATCTGATCTTGAATGTACCTTAACAAACTTGATGTCATACACAGTATACGAGATCAAAATCGCTGCAAGGACTAATGGTGGACTAGGTCCATTCGCGCTCATATATGGAGAAACTTGTCGATGTCCAAAAACTTTCAAAACCAATTACTGGTTCCTTACACCATACTTGAACAAAACAAGTAGTGGAAAAGTCCAGGGCATCTTCTCTCATATCATACGTAACATGATCATTTGGGCATGCGCAGACTGTAAGAATGGTCACGGGAAGACAGTAGTTGATTTTAAACATGATGGAAGTGGCTCACAGGCAGAAAAGAATAGTATGTTGGATGTAATAGCAAATGTTCATCATGGAGCTCAAGTCAGTTTCCCAATCAATGGAAACAAGTACATTGAAAGAGTATATGGCGGTCAACCTTTTGTACCTATAATAGAGTCTCCAGGAGTGGCTTTCCTCGCACATCAATATACCCCTATTTCCCCGGCATGGAACatactcaactcagttctcgGCACATTGCCTTTTATACTCTTCTCTCTCCTTTTAGCATACGTGGCTGGAGTTATCGTATGGTTCTTGGATTCTGATGCTCCAGAAGGCAGCTCATTTCCTCGCTCTTTTATTAAGGGAGCAAACGAAGGAATGTGGTGGTCTTTCATCTCCATGACAACCGTCGGCTATGGAGACCGATCTCCGACAAGAATTACGTCTCGGCTGTTTGCCATCATCTGGACGCTCTATGGTATGGTACTGGTATCAATCATCACTAGTGCAGTTACGACTTCCTTGACTACCGTTACCGTGGAAACAACGAAAAAGATTTATGGACTTCCGATTGCAGCCATTGAAAATTCCTCAGAGCATCGACTGGGTTTACTAATGAATGGCAAGGTTAACCTAGGTGTGTTCTCATAG

Transcript

ENSOJPT00000019754

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
D3YXG0	Hemicentin-1 OS=Mus musculus OX=10090 GN=Hmcn1 PE=1 SV=1
Q96RW7	Hemicentin-1 OS=Homo sapiens OX=9606 GN=HMCN1 PE=1 SV=2
B3EWZ3	Coadhesin (Fragment) OS=Acropora millepora OX=45264 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000055 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF19028 all species →	TSP1_spondin	Spondin-like TSP1 domain	Domain	Interproscan
PF00754 all species →	F5_F8_type_C	F5/8 type C domain	Domain	Interproscan
PF00090 all species →	TSP_1	Thrombospondin type 1 domain	Domain	Interproscan
PF00041 all species →	fn3	Fibronectin type III domain	Domain	Interproscan
PF19030 all species →	TSP1_ADAMTS	Thrombospondin type 1 domain	Domain	Interproscan
PF07885 all species →	Ion_trans_2	Ion channel	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR044004 all species →	Domain	Spondin-like TSP1 domain	Interproscan
IPR000884 all species →	Repeat	Thrombospondin type-1 (TSP1) repeat	Interproscan
IPR036383 all species →	Homologous_superfamily	Thrombospondin type-1 (TSP1) repeat superfamily	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR000421 all species →	Domain	Coagulation factor 5/8 C-terminal domain	Interproscan
IPR003961 all species →	Domain	Fibronectin type III	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR052065 all species →	Family	Complement and asymmetry regulator	Interproscan
IPR036116 all species →	Homologous_superfamily	Fibronectin type III superfamily	Interproscan
IPR013099 all species →	Domain	Potassium channel domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22906 all species →	PROPERDIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOJPP00000017096.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.