Gene detail

Detailed information of ENSOJPP00000017827.1 in Anthopleura xanthogrammica

Genomic Location: not available for this species
NR annotation: XP_031573072.1, probable 37S ribosomal protein S12, mitochondrial [Actinia tenebrosa]
Species Anthopleura xanthogrammica · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
O35680	Small ribosomal subunit protein uS12m OS=Mus musculus OX=10090 GN=Mrps12 PE=1 SV=1
A5CUB9	Small ribosomal subunit protein uS12 OS=Clavibacter michiganensis subsp. michiganensis (strain NCPPB 382) OX=443906 GN=rpsL PE=3 SV=1
B0RB33	Small ribosomal subunit protein uS12 OS=Clavibacter sepedonicus OX=31964 GN=rpsL PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007343 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00164 all species →	Ribosom_S12_S23	Ribosomal protein S12/S23	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006032 all species →	Family	Small ribosomal subunit protein uS12	Interproscan
IPR005679 all species →	Family	Ribosomal protein uS12, bacterial-type	Interproscan
IPR012340 all species →	Homologous_superfamily	Nucleic acid-binding, OB-fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11652 all species →	30S RIBOSOMAL PROTEIN S12 FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003735 all species →	Molecular Function	structural constituent of ribosome	Interproscan
GO:0005840 all species →	Cellular Component	ribosome	Interproscan
GO:0006412 all species →	Biological Process	translation	Interproscan
GO:0015935 all species →	Cellular Component	small ribosomal subunit	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02950	RP-S12, MRPS12, rpsL; small subunit ribosomal protein S12	-	Ribosome	ko03011	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.