Detailed information of ENSOJPP00000019314.1 in Anthopleura xanthogrammica

Genomic Location: chr12:1117882...1129678
NR annotation: XP_031560470.1, homeobox protein orthopedia-like isoform X2 [Actinia tenebrosa]
Species Anthopleura xanthogrammica · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7YTC2Homeobox protein orthopedia OS=Saccoglossus kowalevskii OX=10224 GN=otp PE=2 SV=1
Q6DGH9Homeobox protein orthopedia B OS=Danio rerio OX=7955 GN=otpb PE=1 SV=1
Q5XKR4Homeobox protein orthopedia OS=Homo sapiens OX=9606 GN=OTP PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007423 (this species only) · gene tree & orthology
Transcription factor familyHomeobox · all TF in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00046
all species →		HomeodomainHomeodomainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001356
all species →		DomainHomeobox domainInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan
IPR017970
all species →		Conserved_siteHomeobox, conserved siteInterproscan
IPR051895
all species →		FamilyOrthopedia HomeoboxInterproscan
IPR000047
all species →		Conserved_siteHelix-turn-helix motifInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46770
all species →		HOMEOBOX PROTEIN ORTHOPEDIAInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003677
all species →		Molecular FunctionDNA bindingInterproscan
GO:0000981
all species →		Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0030182
all species →		Biological Processneuron differentiationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSOJPP00000019314.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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