Gene detail

Detailed information of ENSOJPP00000019630.1 in Anthopleura xanthogrammica

Genomic Location: not available for this species
NR annotation: XP_031570528.1, importin subunit alpha-2-like [Actinia tenebrosa]
Species Anthopleura xanthogrammica · all data for this species · gene families

Sequence

CDS

Transcript

ENSOJPT00000022897

ATTGGTTTAAAACACGTTCTTAACGTGAGATTTTCGTGTGCTGTTTCTTTTTACagtcatgaaaaaattagcGAGCTTAGAGTTTTCATacaaaaaaggtctatttacgaaagaaaacaaattgtagcttgggcttcctgggTTTTAAagcgcaatgcattatgggatatcCTGTATaaaacaagatggcgtccTGAGCGAACAAAAGCAACGgtttttgaagcaaatttttttaatatcaagATGAATCGGAAAGATCTTTATAAGCAAGGAGTCCACAGCATTAGTAATCAAAGGACACGGAGGCGAGAACAAGAAGCTGATCTTCGCAAAGAAAGACGTGAAAGATTGTTGACATCCAAACGGATTCGCTTCGCCGAGGAAGTTGAAGCAGAAGAGAACGCAGAAGAATTCACAGTTGATCAAGTTTGTGAGTTTGCAAAAGCGATACAGAAACATGACCAGAACACTTTACATTGTTTGCGCAGCTTACGAAAAGCATTCGCTCAAGGAAGTGCATTGATTAGCACATTTTTAGGCGTTCAAAATGGGCTTCGTGCCATGGTTACTCATTTGACTGGACACAACATAGACCTCCAGCTAGAATCTGCTTGGTGCATAACGAATATGTCTGCAGGAACTCATGAAGATACACTGACCGTTCTCAAAGCCACTGCTCCTTATCTTATTACATATCTTAGTGGACAAAATGTTCAGCTTCAAGATCAGTGTGCATGGGCTTTGGGTAATATGTCTGGAGATTCAGTGGAGTGCAGAGATCTGTTACGATCCCAAGGTATTATAGGACCCATGGTTAACCTCTTAAAGTCTGGCCTACCATCTGCTGTTCAGTCAGCGGCATTTGCACTATCAAACCTTGCAAGAGGTCAAAACAACGCATCAGAAGAGATCATGAATGTTGGGGTAGCTCCACTTCTTGTTGACCACTTGGTGCCTGGGAAAAGCTCTATGGATCTTGTAGCTGAAGTAACTTGGGTTCTGACGTACTTGACATCAAAACCAGATAACTTGCCTCAGTTTGTTTCTTTGGGTATTATTGATTATCTGGTTAAAACATTGTTCAATGTTGTTCAAGAAAACCCAGAAAACAACCAAGTTGTTACACCAATACTGAGATGCTTAGGAAATATAGCAAGTGGTCCAGATGAGTATGGCAGTgtaataattcaaaatggcaCCTTGCTTCCCATCCTGGCGACATGTTTCCAATCCAGTCATCGGCATATTAGGAAAGAAAGCTTATGGGTCATGTCTAACCTTACTGCTGGTCCAGCAGAACATGCTGGGGCTATAGTATCATCTCCTGGTGTTATCCAAGTCATTGTACACATGTTGACTACAGAGACATATGATATCAAGAGAGAGGCAGCCTTGACACTATGCAATGTTGCATATCACAGCGCAGAGTTTCTCAAGGCAATCCTCAGTTGTGGAGGAATGGCTGGTTTTGTAAACATACTCAAATCACATGATCAAGATGCAGTTCTCACAGGACTTCAGTTTGCTGAGATGGCATTAAGAATATTTCCTGAATCAAAGGACAGTTTTGAAGAGGCTGAAGGAGTTGCATGCCTCGAGGGACTTGAATATAACTCGAATCAGACACTCAGGCAATATGCAAATGACCTTTTAGACAGTTATTTTATGGACGAAATAGATGAAGGCGAAGAAATTGACAGTGAATTTAGTAGTAATCTAAATACCATGAAATCACAAGAAATTAACATGACTGGCTCCAATGACGACACCTCTTGAAATCATTGAATACAGtagtgctcttttcatttttgcaacAGATGTGGCCTCTAGAAAGTTGGGTATTTTgcatctgtcaatcaaagcatGCTTGCTCTTGAAATTTTCATGTTTAGCTTAGGAAGTGATATGAGTTAGGGGTTATGTAATTATTATCATCCATATTGCAAGCCCTAATAAACTCAAaaagatattaatttttaaccTTGGACacagcattttttatttcaaaccaTAAGTTTCCCATTGGGGATTGaggatcttttttttttttttttttttgctgcatcAAAATCAATCACTTACCATTCacaatgcaaaataaaaactagCCTGTGTAGCGACGCTTCCTGGGGTTTTTAAGGGTTTGGGGGGCAAATTGACCTCAGCCAATTACAGCAATAGCTAAACACTAACCACTTTTCTTTGGATATTGAAACAGTCACCCCTTTGAAAGCATCTGGATCTGGCCATGGCGCTGGATTAGCTAAATAGGACTacgttttttaactttaaaacaTTCTCCATAAACAAGGAGTAGATTAGTAATGATTATCTGCAATAAAAGTTCGTGCTAACACAGAGGAACTGAGAGCCAT

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007535 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00514 all species →	Arm	Armadillo/beta-catenin-like repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000225 all species →	Repeat	Armadillo	Interproscan
IPR016024 all species →	Homologous_superfamily	Armadillo-type fold	Interproscan
IPR011989 all species →	Homologous_superfamily	Armadillo-like helical	Interproscan
IPR024931 all species →	Family	Importin subunit alpha	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR16356 all species →	TRANSMEMBRANE AND COILED-COIL DOMAIN-CONTAINING PROTEIN 6 TMCO6	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0006606 all species →	Biological Process	protein import into nucleus	Interproscan
GO:0061608 all species →	Molecular Function	nuclear import signal receptor activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15042	KPNA5_6; importin subunit alpha-6/7	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.