Gene detail

Detailed information of ENSOJPP00000020518.1 in Anthopleura xanthogrammica

Genomic Location: not available for this species
NR annotation: XP_031558025.1, uncharacterized protein LOC116294540 [Actinia tenebrosa]
Species abbreviation AXANT · all data for this species · gene families

Sequence

CDS

ENSOJPT00000023876

ATGATTATGTTTTCTCAGTTCACAATGAACCAGTACAAGGTTGTTCTGATTGGAGATGTTGGAGTAGGAAAAAGTTCTCTTCTACGAAAGCTTCGATCTCTTCAGCTTCACCAAGAGTACAAGCCAACAGTTGGGGTTACATGTACTTACATAACCTTCCCAAATGATACCCATCTTTACATCCTTGATGCCTCAGGATCTCCTACCTATGAACATCTTACACAGATATACCTCCGAAATCTTGATGCTGTAATATTAGTATTCGCTTTAAATGACCCAAAAAGCCTGCAAAACCTCAAAGAATGGAACGACAGCTTTACCAAATCCTTTGAAGGTGATTCTAAAGCCGTTTCTAAGTTTGTTCTCGGAACCAAATTGGACGTTCAAAGCATCGAGCTTCAAAAAGGACAGACTTTTGCAGATAGTATCGGAGCTAAATTTAACATTACATCTTCCATGACTGGGACAAATGttgaagatttctttactgatGTCTCAGAACAACTTGTTCAGCGCAAAAGCTTGGTGTTTGAGTTTCGGGACGATTGTGACTCTAGCAAGCTAGCACCACTGTACTTAAAAGATGCACTGATGGCCGGTAGTATCTTGGTTGAGACGTTCCTGGATCCCATACTGTTAGATACATCTGATGAGGAAGTTTCTTATATAAAGGTGGAATACGAAGGACTTTCTTTTGATAAAAGTGGTACATCGTCCCTGAAAACGACCGTTCGTCCAAATTCGCTCCTAAGAACCATTGAGATTCAAGAACCCGTAAGTGTGTGGCAACATGGATGGCTTGAAAATGTCTACGAAGCTGGTGCCGCTTTAAGAAGGCAACCAACGGTAACAGAGCTCAGAGGCATTCAGGACATGGTATTCTGCTCCAGAACTGAAAGCGgactagaaaaaaagaatggccTCTTCTACATGATCCAACTGACCGAAGACAACAATATTCTAGAAAGCGGTTTAAACTTTCCAAAACAACTGACTAGTAAAAAGACCAACATTGCTCAAAACCATTTTGTAGCAAACCCAAAGCTATTAAAGTTTGGAGGTGATATCCAAGCATCATCCATCAGCCTTACAAACGGTGTAGCAGTGATTTCCCTTGAAGATGGAACAGTACTTTCCTTAGGTTGCAATCTCTTAGGAGGGGACTTTAAGGTGGACAAAAATCTTTCTAAACATTTTGGGTTTGGTGAAATCCCGACGCCAGTTCGACTGAAAGTAGAAGTTACTCAGGTAGCATGTGGACTGGACTTTGTTCTGCTGTTGGCAAAAGATGGGAAAGTTTTTTCTCATGGTTCTCCTGAATGTGGTTGCCTTGGACACGGGGACTCAAAGAAACGATCTGAACCTGAAGTGATAAAGAGGCTAAAGTACATCAAGAGCATAGCTACAGGCTATCACCATGCCTTGGCTTTGGACAAGTACGGATCGCTGTACTCCTGGGGCAACAGCGCTGGTACAGGAAAAACTGTTTCCAAACCTGAATCAGTGTACGCAATGAGTTACACTACAGTCAATTCCATAGCATGTGGAGCATTTCACTCGTTGTGTATTGGCGAAGGATATGCCCCGAAAGGAAACTTCCGTAAGAGAGCGATCTTCTCGTGGGGTCTTGGAACAAATGGGGCCTTGGGGCATCTTGTTACTGAAGACCCAACTAAACTCATCAAGAGTGTTTCTGCGGGAAGAAACCACACTGCTTTTCTGACTGATGATGGCATGCTTTACACCTGCGGGATGAATAACAGTGGTCAACTGGGTTACTTCACAGAGCGCGAAATCCAAGGACAACCAAAGAGGGTAGAACTTGGCAAAAATGCCATGGGGATAGAGACCAGAGCTCAGAGTGTCATTTGCTCCGAAGATTGTACAATGGTCACAACTGAAGAAAAACGTGTGATGGTCTGGGGCAAGTTTAGCTACGGTCCAAATACTTACGACCCCACCCCTCTACAAAATACCAGCTTAGACATCATTGACATCACTACTTGCATAATCCCCGAAACCAAAGGAAAAGCTTCATGCGAGCTGATAATCGCCTTGGCAAGTGGTAGCAAGATGGTTTTGTGTACGGGTGTAACACATAGTGCATCCTATGATCATCAGGATTTACCGTGGCCTGATAAAGCCGTTATTTCTTGTAACATCAGTAATTTAGTCCGAATCGTATCAGTTGGCGCAATGATACTAGCATTAGATAATAAGAATGATTGCTATCATGCTGATGTGCACAGTTGGCTGCAAGACTGGTTCGGAGAAGAGTTTCTTTCATCTAGTGAACACAGAATCATGCATAATATCTGTTGTGCAGTGGAAAAACTTGGGCCCCAAAAGATTCCTGCTATGGCCTTTAATCGCCTTGAAGTTACATACCAAATCTTTCAGATAGAAGCTTCCTTGAATTCGTTTCTGTtgcggtctgaaatgggggaTGTTTTTAGCTGGAGTCCATACCAAGGAAGTCCAGTGCATCGGCATATTGAACTGGACGGTCGAATAGTGGTTCAAGTTGGATGTGGGATGCAGCATTTTGCCGCCCTGACAGACAGTGGTCTCTTGTTCACATGTGGCGTTGGGTGTCATGCTCAATTGGGATATGGAGACTTAAAGGACAGGAATATCTTTGTGATGATCCCTCTTTGCGAGTTCGAGAAAATCAAATCCGTTAGTTGTGGACAAGCCAGCACTGCAGCCATTTCTGTATCAGGAAAGGTGTATTTCTGGGGTCAGCTTCAGGTttccaaagaagaaaaacaacacgAAGAAAGAATGCTTTTGAACTCCATGAAAACGTGCACGGCGATAAGCCCATCTTTGTGCGCGGATGTCTCTACCAAGGGAAGTGACATCTCACGAAGTTACAGAGTTATTCCGAGGAAAGAGGAGTTAATTATAGTAGGGATACCATTTGAGTTTAACATCGAACATCAATCACCTGAGGGAGCCCCAGATTTCAGGGTGCAAGCTGTATCGTCAACCAACAACATCTTCAAAGGAAGAGTTGAATCCACTCAAACAAACACTTTTCAATCAACTCTGACTTTCCAAAAAGATGGAAAGTACAACGTTTCTGTCACCTGTAATGGCAACCACATCCTTGGAAGCCCATTTGCGGTGAATGTCGAGCAAGGAGTCCTTCTACCAACGCTTAAAATGACATTAGTTGGCTGTGATGTCGATAGTGTGAGGTCAGTCGCTTCGACCTTGACCACGTTATATGGTGATGGACAAGAAGGTTCTCCATCTTTGAAGTTTACGTTACCAGATGTTCGAGTTCAACTTTGGGGCCATCCTCCAGTCCATGGAGATCAAATTCTATCCGATATTGTGGCTCTTTCATCTCTCAGTGATGGCGGAATATACCTATACGTTTGGGACGGCAGTCTTAACGATTTTCCTGAAGAAAATGTAACGTTTTGGCTTCACCAGATTgcaatcaaagcacctcaagctCATGTCGTTATTCTCGGTGTCAACATGAGCTTGGAGCAGACGCATAGATTTGACTTGAAGGCGTATCAGAGAAGCAATCCCAATTTGAAAAAAGCGATCTTTGTTGCCTCGTTGGAAGCAGAGCCAGTGGCATTTTCCCAAGAAATCCAAGAAATCGTTGGAAAAAGAATCCTTAGTGAACCTGAACGAATTATATGGTCAAAGCTGGTAACACTGGAAACCAGAATACGggacaaaataaatcaaggaACCGAGGTCATGAGTCGAAaagagtttgtttgtttggcaAATGAATGTGGAATAAAAGACGAGAGGACAATCCATGCATCGATACTTCACCTTGAGAAAGTAGGGTTGGTACTTGATGTTGGAGCAGAAGATGTCTTCATTGTTCTGAATCAATACTGGCTGACGAGGCAACTGTCTGAAATGATTCGgcattttcgggcaagatcgcgcgctctattgactctgcccgaaaaatgtcttaagatcatgtctgcgcctgcgatatttttgaaagcgctcgcCACTCAAACAAGGCTCTTCTTCGTTCCTTGCTTGGCAAGTGATGAAGTAACTACAGGAGACGAACCATCGTTTGTCGTGATTCGACATCTCGTTCTTGATTGCCCTCCTTCCAGTCTTCAAGTAGCTTTTCCGTTGCTGTCGGCACGACTATGCAGAGAGCACTTGGAGACCAGTTTCGGACCTTTTTTCTGTGTTATTCACGATGAAACCTTCAAGTGTCGTGTAGACTTTGGGCCATGTTTGATTAACAAGAACAAATCCGAAATTCGCTTCACGGCTCATTCTGAGGAACAAAAATCTCTGGGCAAGTGTGCTGAATCTCTAATCCAGGCAATGGGCGAATACCTTCGACAAGAGTGTCCACATTTGTGTATTGATGCCCATGTACACATTTCATGCAACCATTGCTTGAGGTATTACTTTACATTGGAAACAGTTGAAGATGTAAATGCTGGGGTCGAGTCCATTTTAAAGTGTAGTGAATGCAAATCAACAATCGTTGGGCTTGAATTGTTGGAGGGTTTTGAGATACAGCGCCCGTTGCCAAAATTGATGGAAAGAGTTGGAATTATCCCAGGTAAAACTATTCAGTTACCACCTCTAAAGAGTTTTTCTTCCCGCCAAATTGTCCCACACTTGGTGCACTACATGAACCAACAAGAAGAGAGGATTTTAAATGAAATGAGTCTACAGTTCGAGACGATGGCCAAGTTTTTCTCTGATAATAAGTATGACGTACCACGTACATTTTGCTTGTTGCCTGTCTTTGAAGAAGAATCAGGAATCAGCTGTGGTGACATCTTGGTTTCTCTCAAGCACTATTTACTCCTCTATAAGCAACAGAAGTTCCGACTTCATTTGCTGTGCGAGGGGAATGGTGACGGCACAGGCATTCACTTTCTGGAACCTTCCAAGCACAAAGGCTATGAAATAACCGGTGTcaatgattttgttttgaagtcTGTTGGCCAACTGAGAAATAACTTACAgACGTCGTTTTCGGTCTCGCGtgtgaaatggaccattttcgagatgcgcgagcgctttcaaaaatatcgtaggcgcagacatgaaaaagagATGGACAAGTTTCTCAAAGGGTTTCAAGAAACAGCAAAGACCATGCCACAACCAGAGCATCTCGGCGCATGCTCCAAAGATCAGATCGCTTACAAAACGTCTGGCTGTGACTACAAACAACTAAGGGCGATCGTCAAGTCGTTTGAAGGAATAGACCAATTTGGAGGGCTGACTCAAGAGATGCGTAAAGGAATTGGCGGCGTGTGGGTTTGCGAAGAGCATGCGAAGTACACGAGTAGCACAAAGACATTTGAAATGCCACAAAATAGCCCCAATAACTTAAAGAAGAGTGCTGGATTGTGA

Transcript

ENSOJPT00000023876

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P28188	Ras-related protein RABD2a OS=Arabidopsis thaliana OX=3702 GN=RABD2A PE=1 SV=3
Q39571	GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii OX=3055 GN=YPTC1 PE=3 SV=1
P11620	GTP-binding protein ypt1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ypt1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0008705 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00415 all species →	RCC1	Regulator of chromosome condensation (RCC1) repeat	Repeat	Interproscan
PF13540 all species →	RCC1_2	Regulator of chromosome condensation (RCC1) repeat	Repeat	Interproscan
PF00071 all species →	Ras	Ras family	Domain	Interproscan
PF00630 all species →	Filamin	Filamin/ABP280 repeat	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR009091 all species →	Homologous_superfamily	Regulator of chromosome condensation 1/beta-lactamase-inhibitor protein II	Interproscan
IPR001806 all species →	Family	Small GTPase	Interproscan
IPR000408 all species →	Repeat	Regulator of chromosome condensation, RCC1	Interproscan
IPR051210 all species →	Family	Ubiquitin ligases and GEF domain-containing protein	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR017868 all species →	Repeat	Filamin/ABP280 repeat-like	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR005225 all species →	Domain	Small GTP-binding protein domain	Interproscan
IPR001298 all species →	Repeat	Filamin/ABP280 repeat	Interproscan
IPR014756 all species →	Homologous_superfamily	Immunoglobulin E-set	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR22870 all species →	REGULATOR OF CHROMOSOME CONDENSATION	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOJPP00000020518.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.