Gene detail

Detailed information of ENSOJPP00000020633.1 in Anthopleura xanthogrammica

Genomic Location: chr11:282357...287421
NR annotation: XP_031553077.1, uncharacterized protein LOC116290210 isoform X1 [Actinia tenebrosa]
Species Anthopleura xanthogrammica · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSOJPT00000024005

ATGTCTTCTGGTTCACTGTTGTTCAAACCGTTTCTTGACTGCAACACCAAAGAAATAACGTTTTATCAAGTGAATGAAAGAACTACAGAAATACtgGATACGATCCATTCAGCAATCGAGTCGTTAGCAGAGATTTCATGGAAGTTTCTCGATGGACCGCAAGTCACAGTAGAAGAGATGGCtttgaagattttttctaACCCAAGGATCAGTAGCTTTCTCATTAACACCTCACGCCTTGCTGTCTTCTCAAAAGAACTGGCCAAATCCTTCCGAGCCGATCTTGACTCGCTTGCTCTCATCAAGCAATTGAAGTATTTTTATAACCAGCCAACTGCAGGAGTTCTACAGCAGCTCACGGATCTTGTGTCAAGGGTCACTTGTGACACGGACAAACTCGCTGAATGGAACAACATTGCCAAATTGATTTCCGAAAGCTCCCTTGCGACCAAACCAGTCCGCCACGTTCTCCAAGACAACGGGTTACCTGAATGCTATCAGCAGAACGCCGAGTACCTCGAGAAGGCAGACCCACATGCTATCTACCCAACATCGATTTATCGTTGCTGTGAGGGATATGTCCTGGCCAAAGCAGACGCTTCTGTTATAGAGAGTACAATGAGTACCACACTGACTACCACCATCAAGATCGTTAATGATGTGCTGAATCCTGCTAACAAGGAACTCAAGAATGTCTATCATGCATTTGGCAGATGCGTCGCAATCATCGATGACAAAGTCGAGAAGCTCTACGGTGAACCCATCCAGGTTTACTTTGACACACACAACATCAAACTATTGAAACTGGTTTTTCCAGGTAACGAGGTGGACAAGGACATATCCACAGTGGAAAGCATGTTGGTCTCTCTCAAAAAGATCAAAGTATCCAGGAACCAGCCCATACTAGTGGTTGGTGGAGGAGTGATATCGGACATTGCTGGTTTTGCTACGGCTTTGTATCATCGTAACACCCCATACGTCATGCTGTGTACCAGTATAGTGGCTGGTATCGATGCTGGACCTTCACCTCGTACTTGTTGTGATGGCTTTGGGTTCAAGAACCTGTACGGTTCCTATCATCCGCCTGTACTCACCTTGACAGACAGGAGCTTCTTCCGTACTCTGCACCATGGCTGGATTCGACATGGAATAGCCGAGATCGTCAAGATGGCTGTAGTCAAGGATGAAGAGTTGTTTAACCTGTTAGAACAGGTTTCATCTGCTCTTGTGTGGACCAAGTTTGGTACTGAAATGGATGACTTTGATGGAGATAACGAAATGTTTGGGAAAGTTTGTGATCTCATCATTGGAAAAGCTCTTGAAGGATATGTGAGGTCAGAGTATGGAAATCTGTGGGAGACACATCAATGTCGTCCTCATGCCTACGGACACACATGGAGTCCTGGCTACGAGCTGCCAGCAGGGATGCTTCATGGACACGCTGTTGCAACAGGGATGGGGTTTGGAGCCTATCTTTCATTCTGTGAAGACTGGATAAGCGAAGAAGAGTTGGACCGCATTCTTAAGCTCCTTAGTGGTCTTGAACTGTCCTTGTGGCATCCAATCATGGACGACAGTCTCAAGATtttcaaagcacaggagaagaTGATTGAAAAGAGAGGTGGCAACTTAGCTGCACCGATACCAAAAGGTATTGGAAACTGTGGTTATCTCAACCACATGCCCTTAGAACTCCTTCAACAAAGGCTGCAACAATACCGCGAGATTTGCCAGCAGTTCCCAAGACAAGGGCTTGGAATCGAAGCTCACTGTAAGGAAGTCGGCCTTGAAGACCCAGCAACAGTTGGAGGTGTAAATAAAGAACTCccagaagaaaaagaattggaAATCCAAAATGGTTTTGAAAATggttgtgaaaatggttgtgAAAATGGCCTAGAAAATGACaatagaaaaaggaaagcCCTTACATATCAAGAGTGGATAGAAGCAGTTCAGAAGAAACGTAACAAGGGATTCGTTTCTAACTTGGTTTTGAAGCAAGCCAAGGACACGCCACATCCGCCGGAGTTTGAACCCAACGAAATATGCCACTCAGGCGTGGAAGATTATGCTGGTAAGGTGTCACAAGTACCTAGTACAGATATACAGAAGATTGCCATCGAAACCGAACAGCAACAAATGTTTACACCATGCATGGTAGGACATCTTGAGTCACAGTTCCTGAAGATGATGGTACAGATTGGCAATGCCAAACGTGTGTTGGATATAGGAACCTTCACAGGAATGTCTGCCATGGCGTTTGCTGAGGGTCTCCCTGATAATGGCGAGGTGGTAACTATCGAGTTTGACCCGACAATTGCGTCCACTGCAGCAAAACTATTCCTTGGTTCATCACAAGCACACAAGCTGACACTTAAGGCAAGTAACGCCTATCTACACTGA

Transcript

ENSOJPT00000024005

GGCTACCACCCGACCGCCTAATAAAGGAGTGAATGGACCTTTCGGTGATTGGTTAATTCAATGAACTAATGTGTTATGTTATGCAATAATAAGCCTTGATGCAGGTGTTCAGACTACACTAGCTTAGTCATTCACTATCGACACTTCTGTTCAGTCAACAACCCAGCGATAATCACTGCTTAAAATGTCTTCTGGTTCACTGTTGTTCAAACCGTTTCTTGACTGCAACACCAAAGAAATAACGTTTTATCAAGTGAATGAAAGAACTACAGAAATACtgGATACGATCCATTCAGCAATCGAGTCGTTAGCAGAGATTTCATGGAAGTTTCTCGATGGACCGCAAGTCACAGTAGAAGAGATGGCtttgaagattttttctaACCCAAGGATCAGTAGCTTTCTCATTAACACCTCACGCCTTGCTGTCTTCTCAAAAGAACTGGCCAAATCCTTCCGAGCCGATCTTGACTCGCTTGCTCTCATCAAGCAATTGAAGTATTTTTATAACCAGCCAACTGCAGGAGTTCTACAGCAGCTCACGGATCTTGTGTCAAGGGTCACTTGTGACACGGACAAACTCGCTGAATGGAACAACATTGCCAAATTGATTTCCGAAAGCTCCCTTGCGACCAAACCAGTCCGCCACGTTCTCCAAGACAACGGGTTACCTGAATGCTATCAGCAGAACGCCGAGTACCTCGAGAAGGCAGACCCACATGCTATCTACCCAACATCGATTTATCGTTGCTGTGAGGGATATGTCCTGGCCAAAGCAGACGCTTCTGTTATAGAGAGTACAATGAGTACCACACTGACTACCACCATCAAGATCGTTAATGATGTGCTGAATCCTGCTAACAAGGAACTCAAGAATGTCTATCATGCATTTGGCAGATGCGTCGCAATCATCGATGACAAAGTCGAGAAGCTCTACGGTGAACCCATCCAGGTTTACTTTGACACACACAACATCAAACTATTGAAACTGGTTTTTCCAGGTAACGAGGTGGACAAGGACATATCCACAGTGGAAAGCATGTTGGTCTCTCTCAAAAAGATCAAAGTATCCAGGAACCAGCCCATACTAGTGGTTGGTGGAGGAGTGATATCGGACATTGCTGGTTTTGCTACGGCTTTGTATCATCGTAACACCCCATACGTCATGCTGTGTACCAGTATAGTGGCTGGTATCGATGCTGGACCTTCACCTCGTACTTGTTGTGATGGCTTTGGGTTCAAGAACCTGTACGGTTCCTATCATCCGCCTGTACTCACCTTGACAGACAGGAGCTTCTTCCGTACTCTGCACCATGGCTGGATTCGACATGGAATAGCCGAGATCGTCAAGATGGCTGTAGTCAAGGATGAAGAGTTGTTTAACCTGTTAGAACAGGTTTCATCTGCTCTTGTGTGGACCAAGTTTGGTACTGAAATGGATGACTTTGATGGAGATAACGAAATGTTTGGGAAAGTTTGTGATCTCATCATTGGAAAAGCTCTTGAAGGATATGTGAGGTCAGAGTATGGAAATCTGTGGGAGACACATCAATGTCGTCCTCATGCCTACGGACACACATGGAGTCCTGGCTACGAGCTGCCAGCAGGGATGCTTCATGGACACGCTGTTGCAACAGGGATGGGGTTTGGAGCCTATCTTTCATTCTGTGAAGACTGGATAAGCGAAGAAGAGTTGGACCGCATTCTTAAGCTCCTTAGTGGTCTTGAACTGTCCTTGTGGCATCCAATCATGGACGACAGTCTCAAGATtttcaaagcacaggagaagaTGATTGAAAAGAGAGGTGGCAACTTAGCTGCACCGATACCAAAAGGTATTGGAAACTGTGGTTATCTCAACCACATGCCCTTAGAACTCCTTCAACAAAGGCTGCAACAATACCGCGAGATTTGCCAGCAGTTCCCAAGACAAGGGCTTGGAATCGAAGCTCACTGTAAGGAAGTCGGCCTTGAAGACCCAGCAACAGTTGGAGGTGTAAATAAAGAACTCccagaagaaaaagaattggaAATCCAAAATGGTTTTGAAAATggttgtgaaaatggttgtgAAAATGGCCTAGAAAATGACaatagaaaaaggaaagcCCTTACATATCAAGAGTGGATAGAAGCAGTTCAGAAGAAACGTAACAAGGGATTCGTTTCTAACTTGGTTTTGAAGCAAGCCAAGGACACGCCACATCCGCCGGAGTTTGAACCCAACGAAATATGCCACTCAGGCGTGGAAGATTATGCTGGTAAGGTGTCACAAGTACCTAGTACAGATATACAGAAGATTGCCATCGAAACCGAACAGCAACAAATGTTTACACCATGCATGGTAGGACATCTTGAGTCACAGTTCCTGAAGATGATGGTACAGATTGGCAATGCCAAACGTGTGTTGGATATAGGAACCTTCACAGGAATGTCTGCCATGGCGTTTGCTGAGGGTCTCCCTGATAATGGCGAGGTGGTAACTATCGAGTTTGACCCGACAATTGCGTCCACTGCAGCAAAACTATTCCTTGGTTCATCACAAGCACACAAGCTGACACTTAAGGCAAGTAACGCCTATCTACACTGACCCCTCCCACCACCTGCCCTCTTATGAGAACCGGCTTCTTCATCAACCTCAAGGGTGGATTCAGGGACCTCCGCTAACCAATAAGAAATGTGCTCGTTCCGGCGAAAATTTAGAAACGAAATACCGT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q3M6C3	Demethyl-4-deoxygadusol synthase OS=Trichormus variabilis (strain ATCC 29413 / PCC 7937) OX=240292 GN=Ava_3858 PE=1 SV=1
B2J6X9	Demethyl-4-deoxygadusol synthase OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) OX=63737 GN=Npun_R5600 PE=1 SV=1
A8D7K2	2-epi-5-epi-valiolone synthase OS=Streptomyces albus (strain ATCC 21838 / DSM 41398 / FERM P-419 / JCM 4703 / NBRC 107858) OX=1081613 GN=salQ PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004678 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01761 all species →	DHQ_synthase	3-dehydroquinate synthase	Domain	Interproscan
PF01596 all species →	Methyltransf_3	O-methyltransferase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029063 all species →	Homologous_superfamily	S-adenosyl-L-methionine-dependent methyltransferase superfamily	Interproscan
IPR002935 all species →	Family	Class I-like SAM-dependent O-methyltransferase	Interproscan
IPR050071 all species →	Family	Dehydroquinate Synthase	Interproscan
IPR030960 all species →	Domain	3-dehydroquinate synthase domain	Interproscan
IPR035872 all species →	Family	2-epi-5-epi-valiolone synthase-like	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43622 all species →	3-DEHYDROQUINATE SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0008171 all species →	Molecular Function	O-methyltransferase activity	Interproscan
GO:0003856 all species →	Molecular Function	3-dehydroquinate synthase activity	Interproscan
GO:0017000 all species →	Biological Process	antibiotic biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOJPP00000020633.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.