Detailed information of ENSOJPP00000020724.1 in Anthopleura xanthogrammica

Genomic Location: not available for this species
NR annotation: XP_031572020.1, nuclear cap-binding protein subunit 1-like [Actinia tenebrosa]
Species Anthopleura xanthogrammica · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6GQD0Nuclear cap-binding protein subunit 1-B OS=Xenopus laevis OX=8355 GN=ncbp1-b PE=2 SV=1
Q6GQ80Nuclear cap-binding protein subunit 1-A OS=Xenopus laevis OX=8355 GN=ncbp1-a PE=2 SV=1
Q6DIE2Nuclear cap-binding protein subunit 1 OS=Xenopus tropicalis OX=8364 GN=ncbp1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0003799 (this species only)

 Pfam domain
No Pfam domain signature was detected for ENSOJPP00000020724.1. This gene does have a gene model — the search simply returned no hit.
 InterPro
InterPro termTypeDescriptionSource
IPR016024
all species →
Homologous_superfamilyArmadillo-type foldInterproscan
IPR027159
all species →
FamilyNuclear cap-binding protein subunit 1Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12412
all species →
CAP BINDING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000184
all species →
Biological Processnuclear-transcribed mRNA catabolic process, nonsense-mediated decayInterproscan
GO:0000339
all species →
Molecular FunctionRNA cap bindingInterproscan
GO:0003729
all species →
Molecular FunctionmRNA bindingInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan
GO:0005845
all species →
Cellular Componentobsolete mRNA cap binding complexInterproscan
GO:0005846
all species →
Cellular Componentnuclear cap binding complexInterproscan
GO:0006406
all species →
Biological ProcessmRNA export from nucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSOJPP00000020724.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP