Detailed information of ENSOJPP00000022416.1 in Anthopleura xanthogrammica

Genomic Location: chr12:9795365...9847146
NR annotation: XP_031557238.1, ras-specific guanine nucleotide-releasing factor 1-like [Actinia tenebrosa]
Species Anthopleura xanthogrammica · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q13972Ras-specific guanine nucleotide-releasing factor 1 OS=Homo sapiens OX=9606 GN=RASGRF1 PE=1 SV=2
P27671Ras-specific guanine nucleotide-releasing factor 1 OS=Mus musculus OX=10090 GN=Rasgrf1 PE=1 SV=2
P28818Ras-specific guanine nucleotide-releasing factor 1 OS=Rattus norvegicus OX=10116 GN=Rasgrf1 PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001886 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00617
all species →
RasGEFRasGEF domainFamilyInterproscan
PF00169
all species →
PHPH domainDomainInterproscan
PF00618
all species →
RasGEF_NRasGEF N-terminal motifDomainInterproscan
PF00621
all species →
RhoGEFRhoGEF domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000048
all species →
Binding_siteIQ motif, EF-hand binding siteInterproscan
IPR019804
all species →
Conserved_siteRas guanine-nucleotide exchange factor, conserved siteInterproscan
IPR001895
all species →
DomainRas guanine-nucleotide exchange factors catalytic domainInterproscan
IPR008937
all species →
FamilyRas-like guanine nucleotide exchange factorInterproscan
IPR000651
all species →
DomainRas-like guanine nucleotide exchange factor, N-terminalInterproscan
IPR035899
all species →
Homologous_superfamilyDbl homology (DH) domain superfamilyInterproscan
IPR036964
all species →
Homologous_superfamilyRas guanine-nucleotide exchange factor, catalytic domain superfamilyInterproscan
IPR001849
all species →
DomainPleckstrin homology domainInterproscan
IPR000219
all species →
DomainDbl homology (DH) domainInterproscan
IPR011993
all species →
Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR023578
all species →
Homologous_superfamilyRas guanine nucleotide exchange factor domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23113
all species →
GUANINE NUCLEOTIDE EXCHANGE FACTORInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0005085
all species →
Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0007264
all species →
Biological Processsmall GTPase-mediated signal transductionInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0007265
all species →
Biological ProcessRas protein signal transductionInterproscan
GO:0043547
all species →
Biological Processpositive regulation of GTPase activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSOJPP00000022416.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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