Detailed information of ENSOJPP00000022460.1 in Anthopleura xanthogrammica

Genomic Location: chr6:9240452...9260940
NR annotation: XP_031566568.1, uncharacterized protein LOC116301621 [Actinia tenebrosa]
Species Anthopleura xanthogrammica · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q6V1P9Protocadherin-23 OS=Homo sapiens OX=9606 GN=DCHS2 PE=1 SV=2
Q96JQ0Protocadherin-16 OS=Homo sapiens OX=9606 GN=DCHS1 PE=1 SV=1
Q9NYQ7Cadherin EGF LAG seven-pass G-type receptor 3 OS=Homo sapiens OX=9606 GN=CELSR3 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000519 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00028
all species →
CadherinCadherin domainDomainInterproscan
PF07974
all species →
EGF_2EGF-like domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742
all species →
DomainEGF-like domainInterproscan
IPR002126
all species →
DomainCadherin-likeInterproscan
IPR051830
all species →
FamilyNeurogenic locus notch homologInterproscan
IPR015919
all species →
Homologous_superfamilyCadherin-like superfamilyInterproscan
IPR001846
all species →
Domainvon Willebrand factor, type D domainInterproscan
IPR001304
all species →
DomainC-type lectin-likeInterproscan
IPR013111
all species →
DomainEGF-like domain, extracellularInterproscan
IPR020894
all species →
Conserved_siteCadherin conserved siteInterproscan
IPR016187
all species →
Homologous_superfamilyC-type lectin foldInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24033
all species →
EGF-LIKE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005509
all species →
Molecular Functioncalcium ion bindingInterproscan
GO:0007156
all species →
Biological Processhomophilic cell adhesion via plasma membrane adhesion moleculesInterproscan
GO:0016020
all species →
Cellular ComponentmembraneInterproscan
GO:0005886
all species →
Cellular Componentplasma membraneInterproscan
GO:0007155
all species →
Biological Processcell adhesionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSOJPP00000022460.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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