Gene detail

Detailed information of ENSOJPP00000022510.1 in Anthopleura xanthogrammica

Genomic Location: :...
NR annotation: XP_031573370.1, ATP-dependent RNA helicase ddx24-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSOJPT00000026024

ATGGCAGCAAATCCAAAGAAAAgcaggaaaagaaaatggacAGAGGTTGCTATAGATAATCCAGCATTTTTTAGTGGTGATATGGAAGGTTTTGTTCAGCTTGAAGAGCTTGAAGACTACACGTTGGAGAGTGTTGTTGGAGAAGACTCACGTGTTGGAAACAGTTCTGGTTCTACTGCTGGTCAGGAGGAATCCAAAGGgaaaaatataccaaaaataGAGAAGGAaaccaagaagaaaaaaaggaaaaggaaaaagaatcgaGGAGACCCAACCAAAGCTGACAAACCCCAAAGTGGTGATAGTAAACCTGAAATGACTGAAACAAAACACGAGGACAAGAGTCAAAATGAACCAcaaggacaaaataaaaacaagaaaggAAGGATACTGAATGATATGAGTGACTGGAATGGTCTAGGAGTCCCAGATGATGTGTTGAAGGCATTAAGTGAACAAGGATTTTCAAAACCTACTTCAATTCAAGCCCTTGCTATTCCTCCGGCCATATTTCACCATAGAGACATTATTGGTGCTGCTGAAACAGGTTCAGGCAAAACACTAGCATTTGGTATCCCTATCATTCATCATATCATGGCAACCAAAGAACGTACATTAGCTTCAGCGAGCAAGAccaacaataatgatgatcatgaagCAGAAGATGGAGAAGACAGTGTTAATGAAAGCCCGTTATTGGCACTGATAATGACTCCTACCAGAGAGTTAGCCTTACAGATCAAAGAACATCTCATTGCTGCTGCAAAGTACACATCTGTTAAGGTTGCTGCAATTGTTGGGGGTATGGCAGCTCAAAAACAGCAAAGATTGTTGAAGAAGAAACCGGAAATTGTGGTTGCAACTCCAGGCAGATTATGGGAACTGATGTCATCGCAAGAGGATCATGTGAGTGACTTGGAGCACTTGAGGTACCTGGTGATTGATGAAGCAGACAGGATGATTGAACAAGGACACTTTGAAGAATTATCATCTATACTGGATACTATACACTACAGCAAAAGTGCAAAATCGTTTGATAGTTGTTATCCAGAAGAAGATGTGAAGGTCAAAAAGAACATACCAACTTCAAGGTttcaaaagtttattttttctgcAACATTAACATTTCCCAAGTCCATCAAGAAACACGGAAAAGATTATCTAATGTCAACTGACGAATTACTAGGTAAGGAATATTCCGATTATTTAGACGAATTTTTTATCTCATCAAAACTGTACATAGTACAGTTTTGGAGTATGATTAGACTTGCTTCAAGTCTttctcgcaattttttttccGACGCATACTTGTACTATTTTCTACTAAAATACCCAGGAAGGACTTTAGTCTTTGCAAATACTATTGACTGTATCAGAAGACTTGCGTCCATACTCAGATTACTACAGCTCAATCCATTACCTTTGCATGCCAGTATGCAGCAAAGACAACGACTCAAAAACCTCGACAGGTTTAAATCTTCAGCAAATAGTTTACTTGTATCAACGGACGTGTCCGCGCGAGGACTGGACATTCCCAAAGTACAACACGTCATCCATTACCAAGTTCCAAAGGACCCCGAGGTTTACATCCATCGAAGTGGTCGCACAGCACGTGCATCAAACGAGGGTCTCAGTGTGGTACTCGTTGGGCCTGAGGATCTGGCGTCATACAGGAAGATCATGAAAACCCTTAACACTGGTAACGACCTGGAGTCATTCCCAGTCGAGGTACCATATCTGGCGGACGTTAAATCTAGGATGTCACTGGCTAGGAACATCGACAAGGAACAAAACAAAATTCAAAAGAAGAAGTCGTCCAATGACTGGTTCCTGGCATCAGCCAAAGCGATGGATATTGAAGTGGATGATGACTTGCTCGAGGATCTAGGAgattcgagagagaaaaagctacaacaaaaaaagattgaCCAAATGAAAGCATCCTTGTCATCCATGGTCAAGAATCCTCTTGTACCCAAAGGCTTTAGTGGTAAATTTCCAACACAAAGTGGAAAGCTGGTTGTACCAGGATTTCAAGGAGAGTGTTCAAATACAAACGATATTGCCAAGACAGCAGTAGATGAggtcaagaaaaagaaaagacgcCGCCGATAG

Transcript

ENSOJPT00000026024

Protein

Uniprot

Uniprot term	Description
P0CQ91	ATP-dependent RNA helicase MAK5 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=MAK5 PE=3 SV=1
Q54TD7	ATP-dependent RNA helicase ddx24 OS=Dictyostelium discoideum OX=44689 GN=ddx24 PE=3 SV=1
P0CQ90	ATP-dependent RNA helicase MAK5 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=MAK5 PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00271	Helicase_C	Helicase conserved C-terminal domain	Domain	Interproscan
PF00270	DEAD	DEAD/DEAH box helicase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001650	Domain	Helicase, C-terminal domain-like	Interproscan
IPR000629	Conserved_site	ATP-dependent RNA helicase DEAD-box, conserved site	Interproscan
IPR014001	Domain	Helicase superfamily 1/2, ATP-binding domain	Interproscan
IPR011545	Domain	DEAD/DEAH box helicase domain	Interproscan
IPR014014	Domain	RNA helicase, DEAD-box type, Q motif	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24031	RNA HELICASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005730	Cellular Component	nucleolus	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0003724	Molecular Function	RNA helicase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14805	DDX24, MAK5; ATP-dependent RNA helicase DDX24/MAK5	EC:5.6.2.7	Ribosome biogenesis	ko03009	deepkoala