Gene detail

Detailed information of ENSOJPP00000025152.1 in Anthopleura xanthogrammica

Genomic Location: not available for this species
NR annotation: XP_031549570.1, VPS10 domain-containing receptor SorCS1-like [Actinia tenebrosa]
Species Anthopleura xanthogrammica · all data for this species · gene families

Sequence

CDS

ENSOJPT00000029125

ATGGCGCATTATTACCACTATTTAACGCTACTATCTAGCCTGCTTCTTATCAGTAAGGCCACATCGCAGCTCCATGACGATATTAGCGGCTTCAAATACATCATTTTGGACAAGAAATCCAACAACGCAGCCTTTTACTCAAGTTTGTTCAAGAATGGCAAGATTGACCAAAACAAGTTGAATTCTCCTTCGTCTCGTAGCAAAAGAAGCGTTAAAGATTCTTCTTTATTATATTCTAGTAATAGTTCAAGGAAGGGACTAGCTTCGGAATATGAGTTTCGCGGTGATAATCACAGTGTAGCTTTTCTACATTGGTCTGGTTCAAGAAGTCAGGTGATTTTTATCTTCACGTCCAATTATCAAAGCATTCACCGTAATCCAGGGGGAAGCGTCCATGTGGAAAGTGCTTATTTATGGAGATCTACTGATTATGGTACATCTTTTCAACGAGAAGACAAAACTAAATTCAACAAAGGAAGCAAAAACATCAATGGAATACACTTTTGTAAAGGAAACAATAAAAGGGTGGTTGTTTATGACCAGAAAGGCAAATGGGTGTATATATCAGACAATGAAGGAGATAGCTACGCATCATATCAAGTGAACTTCTCTCCTCAAGAAATTCTTTGTACTAGAAATAGTGGCAAGAACTTTTTGGTTGCTTTTGATGAATCAAAATCTAAGctcTATCATTCAAAAGACAATGGCAAAACTTGGCCATTCATATGTACTGATgttgtccaatatttctgGGGTGCCAACTCTACAACATTGTTCATAGAAACCAAGGAAACAGGTCGTAAATACACGTCAGTTTTGAAATACATCAAACTTCCTGGTGATGCATCAGATGTGAATTTGTTTGATCTTGCGCTTGGTGGTTTTGAGAGGAGATCCTTTGAAGTGGATGGAAAATACATGTTTGTCAAGAAAATGTATCCACAAATGGCATTGTATGTATCTTACAATGGAAGTTCCTTCAAAAAAGCACAGTTTCCTTTTAAGTTGGATGTTAAgGAATTTGATGTGGTAGATGCCAGTGAAGATGAAGTCTTAATGTGCATCCGTCATAATGATAATTACTACAACCTTTATGTTTCTGATAAAACTGGAACAAAATACTCACTGTCCCTGCATAGGATACTTGCTACTTCTTCATATCACTGGGGAAGGAAACTGAAACTTGCTGATATTCACAGGgtcAAAAGTTTGCGTGGTGTTTACATTGCGAATATCCAGACAAAGGATAGCTCTGTTGTAACATTCATCACCTTTGACAAGGGTGGTAAATGGGATAGACTGGCAGTTCCTGATAAGGTTCCATGTAAACAGaTTGGTTGTGGTTTAAATTTACATATGGTGCATAGTGAGAGGTTTTATCAGATCTCAAATGTGCTGTCCTCTGAATCTGCTGTGGGACTCATCATGGCCCAAGGTAATGTGGGAAGATTCTTAACAGAACAAATAGATGTATTTTTGTCCTCTGATGGAGGGCTACACTGGAGAAAgATACTAAGTGGAGCACATGACTATGTGTTTGGTGATCATGGTGGACTGATTGTTGCTGTAGCACTAAGAAACTACACCAAGAAAGTTTGGTACAGTTGTACAGAAGGGAATCATTGGAACACCATCGACATGGAGAAGGATGTAAAGGCTTATGGGCTGGTGACAGAACCTGGAGAAACTACTTGGGTTTCAAATATCTTTGGACAACACTTAACCAAGAGTTTTGAGTGGCTTTCAGTCAAGCTCAACTTCTCTTCAGTATTTGAACGAAAATGCACTGATCAGGATTATACTCTGTGGGCACCTAATGACGAGAGGAATATTGGCAACTGCCTGTTAGGTGAACAGGTGGTGTATGAGCGTCGTAAAGCTGATACCTGCTGCTATAACGGTAAAGAATACGAGCGAGAAATCAACCAGACATCTTGTAACTGTACCTTGGAAGATTTTACGTGTGATTTTGGGTTCCAAAAAAGTGACATGATATCTGACTCATGTGTACCAGTCAGTGAAGACCTCATCGTACCCAAAGTGTGTCCCGAGTTTCAAAAATACATGCGATCATCTGGATATCGTAAAGTCCCTGGGGACAGGTGCGTTGGAGGAATGGAAAAACAGTTTCTCCCAGCAATGACTTGGTGCCCTGTCAAAGTTCCTTCTGGACTCTCTATCTTACTCAAGCGGACAACTCTTGCAGCTCACACCCCTATTATCTTCAATCTGAAACAAGAAAAGgGTTCAACAGGCAGCACGTGGTACTTGTGGGATTTTGGTGACGGCTGTGAACCCATCAACGTGACGGGAATCGCGAAGGCAAAAAAACAGAATCACACATTCACTGATCATGGCAGCTTTAACGTGACAGTCACGGCATCTAACAGTATGGGGACAACCAGTACTAAGATTGTTGTCCAAGTCATAGATGCGATTCTTCGTGTTGTCATCACTCCCCCACATGCCGTCCTGATCGAAAAGCCTGCTCCCTTCAACATAACATTATTCTCTCAACACACTGAACTGAGCTGGGTAGCAGAACATGGCTATGTGCACTTTGTCTGGACATTCGAACTTAATCAGAGACCTAACTTAACATGGGATAACGAAGTTGAACATACTTTTACCAAGTCAGGCGAGTACACTGTTAAAGTGGAGGCCATCAATGCGATAAGCAGACAGTATGGACAAGTTACGATCCAAGTTCACGACACACTTCGAACTTTACGTATATCATTTGACGAGGAACTtgacaaagaaaacaaggGCTCACTGGAGTGGAGAGACGAATTTGGGAAATTGTTTTTGGCTCAGCTGAAACACgTTCTTAATATCCCCATATATCGTCTGGAGGTCTATGTGCTTCCTGGTATACCTACTCAAGTTGACGTGTCCATCATACCAAGAGATGCTAACGACAGCCTTACAATGGACCAAATAGTGGAAAAAATTAAGCAAAAGATCAAACAAAAGCTTCTTGTTGTACCATTTCATCATGGGAGGAAAACTGTGGCTGTTTATGCTGAACTCCTCGATAATTCAGGTAAGAGGCATATTGACGTGGAAACCAAGCAGGGTAGCCAGGATACACGCCTAGCAATTGCTATAGGACTGGCAGCCGGCTTCGTTGTTATGTTTCTAGTTGGGATTATTTTCTATGTGTACAGGCGTTACATTTGGATATACAGACGATACAGTCGCTTGTCCATGAACGGTAATAGGCCAGATGGGTTCGTTCCCCTACACCCAGGGGGGCAGGAAACTGTCGGGTACAATGCCGATGATGATGCTGTTCGGTATGCTGTCCCAGAGGATGAGAACCTTAACGATAGCGAAGATGAACTTCTACTTGACGATATTGCGGAGCCAGGTCGTTTGTCTCTAGTCATCAATGAGGACACTCAACAAGACAACTCACAAAGTTCAGAAACAGCAAGAGCTTAG

Transcript

ENSOJPT00000029125

GCGACAGCGGAGCAAGTTCGAAATGAAGAAAACTTGAGTTCTGCGTGTtgtctttatttaaagagCTATGGCGCATTATTACCACTATTTAACGCTACTATCTAGCCTGCTTCTTATCAGTAAGGCCACATCGCAGCTCCATGACGATATTAGCGGCTTCAAATACATCATTTTGGACAAGAAATCCAACAACGCAGCCTTTTACTCAAGTTTGTTCAAGAATGGCAAGATTGACCAAAACAAGTTGAATTCTCCTTCGTCTCGTAGCAAAAGAAGCGTTAAAGATTCTTCTTTATTATATTCTAGTAATAGTTCAAGGAAGGGACTAGCTTCGGAATATGAGTTTCGCGGTGATAATCACAGTGTAGCTTTTCTACATTGGTCTGGTTCAAGAAGTCAGGTGATTTTTATCTTCACGTCCAATTATCAAAGCATTCACCGTAATCCAGGGGGAAGCGTCCATGTGGAAAGTGCTTATTTATGGAGATCTACTGATTATGGTACATCTTTTCAACGAGAAGACAAAACTAAATTCAACAAAGGAAGCAAAAACATCAATGGAATACACTTTTGTAAAGGAAACAATAAAAGGGTGGTTGTTTATGACCAGAAAGGCAAATGGGTGTATATATCAGACAATGAAGGAGATAGCTACGCATCATATCAAGTGAACTTCTCTCCTCAAGAAATTCTTTGTACTAGAAATAGTGGCAAGAACTTTTTGGTTGCTTTTGATGAATCAAAATCTAAGctcTATCATTCAAAAGACAATGGCAAAACTTGGCCATTCATATGTACTGATgttgtccaatatttctgGGGTGCCAACTCTACAACATTGTTCATAGAAACCAAGGAAACAGGTCGTAAATACACGTCAGTTTTGAAATACATCAAACTTCCTGGTGATGCATCAGATGTGAATTTGTTTGATCTTGCGCTTGGTGGTTTTGAGAGGAGATCCTTTGAAGTGGATGGAAAATACATGTTTGTCAAGAAAATGTATCCACAAATGGCATTGTATGTATCTTACAATGGAAGTTCCTTCAAAAAAGCACAGTTTCCTTTTAAGTTGGATGTTAAgGAATTTGATGTGGTAGATGCCAGTGAAGATGAAGTCTTAATGTGCATCCGTCATAATGATAATTACTACAACCTTTATGTTTCTGATAAAACTGGAACAAAATACTCACTGTCCCTGCATAGGATACTTGCTACTTCTTCATATCACTGGGGAAGGAAACTGAAACTTGCTGATATTCACAGGgtcAAAAGTTTGCGTGGTGTTTACATTGCGAATATCCAGACAAAGGATAGCTCTGTTGTAACATTCATCACCTTTGACAAGGGTGGTAAATGGGATAGACTGGCAGTTCCTGATAAGGTTCCATGTAAACAGaTTGGTTGTGGTTTAAATTTACATATGGTGCATAGTGAGAGGTTTTATCAGATCTCAAATGTGCTGTCCTCTGAATCTGCTGTGGGACTCATCATGGCCCAAGGTAATGTGGGAAGATTCTTAACAGAACAAATAGATGTATTTTTGTCCTCTGATGGAGGGCTACACTGGAGAAAgATACTAAGTGGAGCACATGACTATGTGTTTGGTGATCATGGTGGACTGATTGTTGCTGTAGCACTAAGAAACTACACCAAGAAAGTTTGGTACAGTTGTACAGAAGGGAATCATTGGAACACCATCGACATGGAGAAGGATGTAAAGGCTTATGGGCTGGTGACAGAACCTGGAGAAACTACTTGGGTTTCAAATATCTTTGGACAACACTTAACCAAGAGTTTTGAGTGGCTTTCAGTCAAGCTCAACTTCTCTTCAGTATTTGAACGAAAATGCACTGATCAGGATTATACTCTGTGGGCACCTAATGACGAGAGGAATATTGGCAACTGCCTGTTAGGTGAACAGGTGGTGTATGAGCGTCGTAAAGCTGATACCTGCTGCTATAACGGTAAAGAATACGAGCGAGAAATCAACCAGACATCTTGTAACTGTACCTTGGAAGATTTTACGTGTGATTTTGGGTTCCAAAAAAGTGACATGATATCTGACTCATGTGTACCAGTCAGTGAAGACCTCATCGTACCCAAAGTGTGTCCCGAGTTTCAAAAATACATGCGATCATCTGGATATCGTAAAGTCCCTGGGGACAGGTGCGTTGGAGGAATGGAAAAACAGTTTCTCCCAGCAATGACTTGGTGCCCTGTCAAAGTTCCTTCTGGACTCTCTATCTTACTCAAGCGGACAACTCTTGCAGCTCACACCCCTATTATCTTCAATCTGAAACAAGAAAAGgGTTCAACAGGCAGCACGTGGTACTTGTGGGATTTTGGTGACGGCTGTGAACCCATCAACGTGACGGGAATCGCGAAGGCAAAAAAACAGAATCACACATTCACTGATCATGGCAGCTTTAACGTGACAGTCACGGCATCTAACAGTATGGGGACAACCAGTACTAAGATTGTTGTCCAAGTCATAGATGCGATTCTTCGTGTTGTCATCACTCCCCCACATGCCGTCCTGATCGAAAAGCCTGCTCCCTTCAACATAACATTATTCTCTCAACACACTGAACTGAGCTGGGTAGCAGAACATGGCTATGTGCACTTTGTCTGGACATTCGAACTTAATCAGAGACCTAACTTAACATGGGATAACGAAGTTGAACATACTTTTACCAAGTCAGGCGAGTACACTGTTAAAGTGGAGGCCATCAATGCGATAAGCAGACAGTATGGACAAGTTACGATCCAAGTTCACGACACACTTCGAACTTTACGTATATCATTTGACGAGGAACTtgacaaagaaaacaaggGCTCACTGGAGTGGAGAGACGAATTTGGGAAATTGTTTTTGGCTCAGCTGAAACACgTTCTTAATATCCCCATATATCGTCTGGAGGTCTATGTGCTTCCTGGTATACCTACTCAAGTTGACGTGTCCATCATACCAAGAGATGCTAACGACAGCCTTACAATGGACCAAATAGTGGAAAAAATTAAGCAAAAGATCAAACAAAAGCTTCTTGTTGTACCATTTCATCATGGGAGGAAAACTGTGGCTGTTTATGCTGAACTCCTCGATAATTCAGGTAAGAGGCATATTGACGTGGAAACCAAGCAGGGTAGCCAGGATACACGCCTAGCAATTGCTATAGGACTGGCAGCCGGCTTCGTTGTTATGTTTCTAGTTGGGATTATTTTCTATGTGTACAGGCGTTACATTTGGATATACAGACGATACAGTCGCTTGTCCATGAACGGTAATAGGCCAGATGGGTTCGTTCCCCTACACCCAGGGGGGCAGGAAACTGTCGGGTACAATGCCGATGATGATGCTGTTCGGTATGCTGTCCCAGAGGATGAGAACCTTAACGATAGCGAAGATGAACTTCTACTTGACGATATTGCGGAGCCAGGTCGTTTGTCTCTAGTCATCAATGAGGACACTCAACAAGACAACTCACAAAGTTCAGAAACAGCAAGAGCTTAGCGAAAATaccaaacaaaatacaaaatgcgATGAAACAATTATATCACGCTGCTTACGCACGCAATTACACGATAATCGCACGTAAATAGCACGTAGGAATACTTCAGGAAAGTGCGACGTATGGACACCAAAAGTGAAAAGATGTCTTGAAAAAAGAATTCGTGTATTTCATGCCGCCAGACTAAAGCTATATTTAAGAAATCTATTCTGCCTTTGAAACgctcccagaatgcattgttttccgcgcatgacgtcatagcttTTTATCGACAATTAATATAAAAGTAAccaaataaaaagagaacgaaagaaaagggaaagaaatggaagaaaagaaaaagaaaattaagtaAGGAAAATTGGCCGTATTTTTTAAGAATCTAAGTTATGACGATAtgatcgcaaaaatgatgcaTTTTGGGATGTGATAAGTGGTGCAAACATAAGACTATATCCACAGGCTTCATAACATCAAATTGATCAATCTAATGAGAAAGTAAGATTAATGCTGCATTAAGTTATCAAGGTGCACATCATCTTATTTCATTTAACTGATATTCAGTGTTATTCCTCAAACATCAGATGATGATAGTCCAAAATATGACTCACGCTTCAAAACATATGCCATATGCAAGTGATAGAGAGCAGACTTCGTGTGACTGAGGACACGTTTACATGACGGTAGGGTAACGCTACTGTTAGGGACATGGTTCTCAACCAGGGAATACCGTCCCTTGGCGCTAAGCAATAGAACTGAGTAGTAGTTTTTATCGCCGCTGGCCTCGAAAGCAATTAGACTTGACTTTGCAAAAGTTCAACGTCTGAACTGGACCTTAGCCCTACAGCAGTATTAAAGTCCGTTTACATGAAGGTAGAGTGACCGATCCTTCTGCTAGGGGCATGTTTCCGACTATACCAGGCTACACCAATCGAAAAGGAGAGGTATCCTAATAGCAGTAGTGTCACCTGACCTCATGTAAACGGGGCCTGGAAAAAGTT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8WY21	VPS10 domain-containing receptor SorCS1 OS=Homo sapiens OX=9606 GN=SORCS1 PE=1 SV=3
Q9JLC4	VPS10 domain-containing receptor SorCS1 OS=Mus musculus OX=10090 GN=Sorcs1 PE=1 SV=1
Q98930	Sortilin-related receptor (Fragment) OS=Gallus gallus OX=9031 GN=SORL1 PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000636 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF18911 all species →	PKD_4	PKD domain	Domain	Interproscan
PF15901 all species →	Sortilin_C	Sortilin, neurotensin receptor 3, C-terminal	Domain	Interproscan
PF15902 all species →	Sortilin-Vps10	Sortilin, neurotensin receptor 3,	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022409 all species →	Domain	PKD/Chitinase domain	Interproscan
IPR006581 all species →	Domain	VPS10	Interproscan
IPR000601 all species →	Domain	PKD domain	Interproscan
IPR031777 all species →	Domain	Sortilin, C-terminal	Interproscan
IPR035986 all species →	Homologous_superfamily	PKD domain superfamily	Interproscan
IPR031778 all species →	Domain	Sortilin, N-terminal	Interproscan
IPR018506 all species →	Binding_site	Cytochrome b5, heme-binding site	Interproscan
IPR013783 all species →	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR050310 all species →	Family	VPS10-related sortilin family receptors	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12106 all species →	SORTILIN RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0020037 all species →	Molecular Function	heme binding	Interproscan
GO:0005794 all species →	Cellular Component	Golgi apparatus	Interproscan
GO:0006892 all species →	Biological Process	post-Golgi vesicle-mediated transport	Interproscan
GO:0016021 all species →	Cellular Component	membrane	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K27081	SORC1; VPS10 domain-containing receptor SorCS1	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.