Gene detail

Detailed information of ENSOJPP00000025596.1 in Anthopleura xanthogrammica

Genomic Location: not available for this species
NR annotation: XP_031556060.1, cell growth-regulating nucleolar protein-like [Actinia tenebrosa]
Species abbreviation AXANT · all data for this species · gene families

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q08288	Cell growth-regulating nucleolar protein OS=Mus musculus OX=10090 GN=Lyar PE=1 SV=2
Q9NX58	Cell growth-regulating nucleolar protein OS=Homo sapiens OX=9606 GN=LYAR PE=1 SV=3
Q6AYK5	Cell growth-regulating nucleolar protein OS=Rattus norvegicus OX=10116 GN=Lyar PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005992 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF08790 all species →	zf-LYAR	LYAR-type C2HC zinc finger	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036236 all species →	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan
IPR039999 all species →	Family	Cell growth-regulating nucleolar protein	Interproscan
IPR014898 all species →	Domain	Zinc finger, C2H2, LYAR-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13100 all species →	CELL GROWTH-REGULATING NUCLEOLAR PROTEIN LYAR	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000122 all species →	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0005730 all species →	Cellular Component	nucleolus	Interproscan
GO:0006364 all species →	Biological Process	rRNA processing	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15263	LYER; cell growth-regulating nucleolar protein	-	Ribosome biogenesis	ko03009	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.