Detailed information of ENSOJPP00000025623.1 in Anthopleura xanthogrammica

Genomic Location: chr7:15890206...15894764
NR annotation: XP_031551007.1, lysosomal-trafficking regulator-like [Actinia tenebrosa]
Species Anthopleura xanthogrammica · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q99698Lysosomal-trafficking regulator OS=Homo sapiens OX=9606 GN=LYST PE=1 SV=3
Q9TTK4Lysosomal-trafficking regulator OS=Bos taurus OX=9913 GN=LYST PE=1 SV=1
P97412Lysosomal-trafficking regulator OS=Mus musculus OX=10090 GN=Lyst PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002273 (this species only)
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|CDC20 · all ubiquitin genes in this species
Ubiquitin familyE3|E3 adaptor Cullin RING|DWD · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02138
all species →		BeachBeige/BEACH domainFamilyInterproscan
PF20426
all species →		NBCH_WD40Neurobeachin beta propeller domainRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001680
all species →		RepeatWD40 repeatInterproscan
IPR036322
all species →		Homologous_superfamilyWD40-repeat-containing domain superfamilyInterproscan
IPR000409
all species →		DomainBEACH domainInterproscan
IPR019775
all species →		Conserved_siteWD40 repeat, conserved siteInterproscan
IPR046851
all species →		DomainNeurobeachin, beta-propeller domainInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR036372
all species →		Homologous_superfamilyBEACH domain superfamilyInterproscan
IPR050865
all species →		FamilyBEACH Domain-ContainingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR13743
all species →		BEIGE/BEACH-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSOJPP00000025623.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
TOP