Gene detail

Detailed information of ENSOJPP00000027593.1 in Anthopleura xanthogrammica

Genomic Location: not available for this species
NR annotation: PFX16501.1, Transposon TX1 uncharacterized 149 kDa protein [Stylophora pistillata]
Species Anthopleura xanthogrammica · all data for this species · gene families

Sequence

CDS

ENSOJPT00000031921

ATGACGCGCACTGGATACGCTAGTCTGCAGACGAAACCGATCAGACGGCCAAACACTGTCACAATCTATATTCCTCGAGAATTCTCGAGGAGATTTGGTAAGGATGTCAAGCAGAAGGTGATTGACGCCATTACTGACGTCGTCTCTTCTGCCTACATCAAATGCATTCAGCCTGTTGGCTCGGAGGTGCGGGTCACCTTTTCGTGCCAACAGCACAAAGATACGCTCCTATACAAGGGAATTTCTGTAGGAGGTTTGACTCTCCCCATACGGGAGGCGGAGGTGAATCGCACCTTTGTGCATATTCACCGCCTGCCGTATGAGGTTCCTGATGACGACCTCGTTTCACTTCTGGGCTACTACGGCAAGGTAGTGGAAGTGAAACGGGTCGTTGATAACATGGTTAATGGGTGCGAGACTGGTTCTCGCACTGCAAAGATTGAACTGCGGGAGCACATGCCGCGTCTCTTGCGCTTGCGGGGATTCTGGTTCACCGCTTTTTACAAGGGCCAACCGGACTACTGCACCGGTTGCCGGAAGACGGGGCACGTCCTGCGGAATTGTCCGCTGGAGGGGAAGTGCTGGACCTGTGGGGCTGGGGGACACTTTGCCAGGGATTGCCCCTCAAAATCTCCCATCAACACACATACCTCCACGAGCCATGAAGAGTCCTCTGACAGTGAGGCCTCTCAATACAATGACTGTGGCAGTAGTACGCCACCACCAAAAAGGTCAAGAGGCCTTGAGACGCCGTCGAGGGGTGGACCCCCGTCAGGGCCCCTGCCCGGGAGGGGGGTAGAGAGTACAGAGgctacccctcccctcccaagGAGAACTGTCTCCAACACATTGCCGGAGAGTGGCTCGCCCAGTGCGCACCTTGTTGAGGAGCGCGCTGACGCTTCACTCTCTGAGGATGATGGGGATTGCAATCCTGACCTTGCCAGTTCGGCGAGGTCGGATTGCGAGTCCCGGGTTTCCTCGGCAACTGGGCAGGAGGTGCCTTGTTATACGGGGGGTACCATCACAAACCCCAGCGGGTCTCTGTCTTTCTCACCAGTGACTCCGAACATTGGCTCGTCCCCCTTCACCGATGGGGATTCCACCCTGGCAGAAGTCTGTTCTGACCAAACAATTGATTGTTCCATGGGAGACTCCACCTTGGGGGAAATACagacccctcccccctctatAGTCCCCAGTGTCAGTGATTCCCAGCTAGTCACCCGGCTTTGGAGAGATGATGTTGGTCGGTGGGTGCAAGCAGAGTTTTCCTATCAGGACACTGTGTTTAGGGTCGTCTCTTTGTACGCCCCTAATCGCAATCCTGATAGGGATTCCTTTTTCACCAAGGTCACTGATGCAGTCGACCCAGGCATCCCTGTGATGCTTGCGGGAGACTTCAACTCTGTCTTGGACCGTCGTGTAGATCGCAGAGGATCGAACCCTCTTAGCTCATACTCTGAGAGCTCTGATGCAATCAGAGACTTGATGAGTGGAGCTGACTGTCTTGACGGGTGGAGATATCTTCATCCTCAAGACCGTAACTACACGTGGACGAAACCAGATGGCTCTCTTTCTTCAAGAATCGACCTGGTACTTTTTCCTAGGCAGTGGGCTCATGAGATGAGTGGGGCTAACATCTTGCCCTGCCCGTACTCTGATCACTCCGCCGTTGTTGTGAGTTTCCATGTCCCAGATACCATCTCACCGGGACCTTCCTTCTGGAAACTCAACACTTCTATATTAGAAGAGAAGGAATACCATCTCCTTATAGAGGCCTTGTGGGGGCAATGGCAGAATCGTCGCGACGATTACGACTCTCTCTTGATGTGGTGGGACCTGGGCAAGTGTAAGATTCGGGATGCCACCATGAAATACTGCAAGGCACGTGCTTGTAAAAGGCGCTCTAAGCGTCAGTCCTTATTGGACGAGCTGGCCTCTCTCCGGTCCCAATTCGAACTGGGTCGGACATCAGTCCTCACTCGCATGAAACAGTTGGAGAGTGAACTTCGAGCATTTGACCTAGACGCAGCTCGCGCTGCTCAGGTCCGTGCGCGTGCGCGTTGGGTAGAAGAGGGCGAATCTTCGTCCTCTTACTTTATGCGTCTCGAGAAGAGCAGGGGGAGTAGACAGCGGATTTCTGCTGTCCGCAAACCCGATGGGCAAGTCACTCGTGACATGCTCGACATCTTGGCGACATGGAgagatttttatcaaaatctcTTCACTGCGTCTGATGTGGATTCTCAGGTCCAGAACGACATGTTCTCGAACCTGGAGTCCAAGCTCTCAGACGCCGAAGCTGCTTCCTGCGAGGGACCATTGACCTTGAGTGATGCCTACGAGGCCCTCAAGGGGATGGCTCGGGGCAAGACCCCAGGCCTTGATGGTCTCCCCATGGAGTTTTACATAGGTTTCTGGCCGCTGGTCGGCCGAGACCTTGTAAATGTCTTGAACTGCGGCTTTGCTAACCAGCAACTTTCCATCTCGCAGCGCAGAGGTATTATCACACTTATCCATAAGCGAGATGATACTCTGGAAATGAAGAATTGGCGCCCCATATCGCTCCTTAATGTCGACTATAAGATTGCAACCAGATGTATCGCTGGTCGTCTTCTTAAAGTCATAGGTAGCGTTGTGGCGGAAGATCAAACATGCGGTATTCCTGGCCGTTTCATTGGGAATAATGTCTCTTTGTTGAGAGACATTATTCATTATGCAACAGTTGGAGATATACCTTTGAGTATTCTCTCTCTGGACCAAGAAAAGGCTTTTGATCGAGTTGATTGGGGCTTTATGCACCGCACTCTTTCTTCCATGGGGTTTGGGCCTTCGTTTTGTGGTTGGGTACGCCTATTCTACACCGGGGTCTCGAGCGCAGTAGTTGTCAATGGTTACATCTCTGACTTTTTTGACCTCTCTCGAGGGGTCCGACAGGGATGTCCATTGAGTGCGCTCCTGTATGTACTGACAGCCGAGGTGCTGGCATGCAACATTCGTGCTTGCGACCGGATTAAGGGGGTACTCCTACCCTCTGATCCTAGTCGTCAAGCAGTGATCTCTCAGTATGCCGATGACACAACGATCGTCTGTACTTCGGATGACGCTGTGGTCGCCAGCTTTGAGATCTATGCCCAGTACGAGAAAGCATCGGGTGCACGAATCAACGCTGCAAAGTCCAAGGGCTTGTGGCTTGGTCCGTGGCGCCACCGTACTGATCCTCCTGTCCAACTCCGTTGGTCTTCCATTTCCCTTCCTGTTTTGGGTACTTTTCTTGGTCCAGACAACTTGGAAGAATCGAACTTCCGTCCCAGAATCGAATCCTTGACCAAGGTCTTGGACTCGTGGCGTCAGCGACAGCTCTCTTTCCGCGGAAAGAGCCTGGTTGTTAATGCTCTGGGCCTTTCAGGTCTCTGGTATACTGTGTCAGTGTTACCAGTGCCAGAATGGGTTGCAGTTGAGGTTGACCGGGCAATCCATTCCTTCTTGTGGTCCAACAAGAAGGAATTGATTGCACGCACTACAGTTTGTCAGCCTACTACGGAGGGAGGAATCGGTTTCCCTTGCTTCCGGCATAGGGTTTCTGCATTCCATGGACAATGGATTCGAAGATACTTCGACTCCTCGTCCCCAAAGTGGAAAGCCTTCTTCAAGTATTTCATTGCAGAGCTTCCGAGGGATTTCCTCCGAAATCCCTATCGGCCTCGCAATACTACGCTGCCGCCATTCTACCGGAGTGTCGTGGAAGCCTGGAACGCCCTCGATGGAGGTGTCGTTACTGGCAGAACCGACATTTTTTACAACCGGTCAGACAGCCCGTCAACTCTGACATCGCTGTCTGTGAAAGGCGCTTATCAGTTGCTGGTTATAAAGAACAGACGCCCTCCGCACTGCGTAGCGAAGTTCACTCCCGTTTACCCCGATGTAGTGTGGCCTGATGCCTGGCAACAGGTCCACTGCTGCGCGATTGACAGGCAAGTCACTGATCTTGCCTGGAAGATCGCCCACGGGGTCATCTACACCGCGGCACGTCTCTCCGACTTTGGTTGGGGGAGCGTGGATCCAACTTGTTTCTGCGGTCATCCTCGTGAGGACATCTCCCACCTTTTCTTTGGCTGTCCTCTTGCCCAGAGTGCACTGGCTTGGGTGTCTTCGGTGATTCACCGAGGTCTACCTGATGCTCCAGACCTCACTGAACGTCGCGTTCTGTATGGGTTTACCCAACAGGAACGTGTCCCACCCATTTACACCTACATGGTGCATGTAGCCAAACACACCATCTGGCTACAACGGAACGACTTCCGGTTCCGTGATATTCAACCCTGTGCGGCCACTGCCATTGCCTCGATACAAGGCCGACTCCGCTTCATCCTCCCCATTGCGTTTAAACGTTGCAAGTCTGATGCAAGTCGGCGCAAGTTTGAACGGAAATGGGGAGCAAATGGAGCTGTTGGTCGTCTGATCAGCCGTTGTTTCGTTGTCTCAGTGTGA

Transcript

ENSOJPT00000031921

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P14381	Transposon TX1 uncharacterized 149 kDa protein OS=Xenopus laevis OX=8355 PE=4 SV=1
O00370	LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1
P11369	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000039 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00098 all species →	zf-CCHC	Zinc knuckle	Domain	Interproscan
PF00078 all species →	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF13966 all species →	zf-RVT	zinc-binding in reverse transcriptase	Domain	Interproscan
PF03372 all species →	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001878 all species →	Domain	Zinc finger, CCHC-type	Interproscan
IPR035979 all species →	Homologous_superfamily	RNA-binding domain superfamily	Interproscan
IPR036691 all species →	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR052343 all species →	Family	Diverse Retrotransposon and Effector-Associated Protein	Interproscan
IPR000477 all species →	Domain	Reverse transcriptase domain	Interproscan
IPR036875 all species →	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR043502 all species →	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR026960 all species →	Domain	Reverse transcriptase zinc-binding domain	Interproscan
IPR005135 all species →	Domain	Endonuclease/exonuclease/phosphatase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46890 all species →	NON-LTR RETROLELEMENT REVERSE TRANSCRIPTASE-LIKE PROTEIN-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003676 all species →	Molecular Function	nucleic acid binding	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0003824 all species →	Molecular Function	catalytic activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K04527	INSR, CD220; insulin receptor	EC:2.7.10.1	CD molecules	ko04090	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.