Detailed information of ENSOJPP00000027760.1 in Anthopleura xanthogrammica

Genomic Location: chr7:11043008...11072992
NR annotation: XP_031571419.1, nucleoporin GLE1-like [Actinia tenebrosa]
Species Anthopleura xanthogrammica · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q4KLN4mRNA export factor GLE1 OS=Rattus norvegicus OX=10116 GN=Gle1 PE=2 SV=1
Q8R322mRNA export factor GLE1 OS=Mus musculus OX=10090 GN=Gle1 PE=1 SV=2
Q3ZBK7mRNA export factor GLE1 OS=Bos taurus OX=9913 GN=GLE1 PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0007579 (this species only) · gene tree & orthology
Ubiquitin familyE3|E3 activity RING|RING · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF07817
all species →		GLE1GLE1-like proteinRepeatInterproscan
PF00097
all species →		zf-C3HC4Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012476
all species →		FamilymRNA export factor GLE1-likeInterproscan
IPR038506
all species →		Homologous_superfamilyGLE1-like superfamilyInterproscan
IPR018957
all species →		DomainZinc finger, C3HC4 RING-typeInterproscan
IPR013083
all species →		Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12960
all species →		GLE-1-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0000822
all species →		Molecular Functioninositol hexakisphosphate bindingInterproscan
GO:0005543
all species →		Molecular Functionphospholipid bindingInterproscan
GO:0005643
all species →		Cellular Componentnuclear poreInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0016973
all species →		Biological Processpoly(A)+ mRNA export from nucleusInterproscan
GO:0031369
all species →		Molecular Functiontranslation initiation factor bindingInterproscan
GO:0044614
all species →		Cellular Componentnuclear pore cytoplasmic filamentsInterproscan
GO:0046872
all species →		Molecular Functionmetal ion bindingInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSOJPP00000027760.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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