Gene detail

Detailed information of ENSOJPP00000028746.1 in Anthopleura xanthogrammica

Genomic Location: not available for this species
NR annotation: XP_031563527.1, endoplasmic reticulum-Golgi intermediate compartment protein 1-like [Actinia tenebrosa]
Species abbreviation AXANT · all data for this species · gene families

Sequence

CDS

Transcript

ENSOJPT00000033221

TTGGCATTTCCACAGAGTTGCTTTTCTTGCACtgaaagaagcaaagaaagaaagaaatattttgaaaccataatatttttctttgttcgagATCATTTCCACGTGTAACCCTTGTTTCCAAGCAATTTCTTCTCAGCCGATAACATTTCCCAGAATTCCCGCCATAATACaaaaaccaaccaatcacaacgcaCCGCGTGGACGGCTTCAATGGCAGCCATAACAACAAActtctgaaatattttcctcTTCCTTAATACAACTCTTTCAATTCTGATCGCTCGGTCTTGGACTTAAAAATGCAGTTCGACGTCCGAAGgtTTGATATTTACAGAAAGGTTCCTAAGGACCTAACAGAACCAACATATACAGGCGCTGTTAtatcAATCCTTAGCTGTCTGTTCATGATATTCCTTTTCTTATCAGAATTTTACAGCTTCATAACAACAGAAATTGCTAGCGAGCTATTTGTTGATAATCCATCACCAAAGAATGAACATCTTCCAGTAGTGCTGAATCTTACACTTCCAAGAATGAGATGTGAATTTATGGGACTTGATATTCAAGATGAGATGGGAAGACATGAAGTGTCATTTCAAGAGAACATAGATCGTACACCCACTGAAGATGGAGGAGGGTGCAACTTCTTTGGAAAATTCAATATAAATAAGGTTCCAGGGAATTTCCATATATCAACTCATGGTGCTGGAAGACAGCCAGATGATCCTGACATGAGCCACCTCATCAACTCACTTAACtttggtgaaaaaattaaaGACAAACTCCCAGGTGTTTTTACAGCTTTAAGACATTTGGATAAAACAGATGGCAATTcgcTGTCTTCCCATGACTATATCCTGAAGATTGTTCCAACTATTTATGAAAAGCTGGATGGAACTACACAGTATTCGTATCAGTACACATGGGCATACAAGAACTACATCTCATATTCACATGGCGGTTCTGTATTACCAGCGATCTGGTTCCGATATGACCTAAGCCCAATCACTGTCAAATATGTCGAGCGACGAAAGCCTATCTACCATTTTATTACTACCgTATGCGCCATCGTCGGAGGTACTTTCACCGTAGCGGGTATCATAGACTCCAGCATTTTTACAGCTTCTCAAGTTTTCAAGAAACACCAAATGGGAAAACTCAGTTGATCGGTCATTCTAGTTAGGAAGACTAGCTTATTCCAATTAAATTTGCTCAAATTGATTTATCCATACTTGGTCGTTACGTTTTTCGCATTTAAAacaacgtgtcattctcttgagtattagtTCTTTGTCTTTCGTTAACGTTTGAGTTCATATGTCTAAGCTGGTTTGGTCTGTTCACCAGCGAAACGttcaagaaaacagaaaacgaGTTGCCCGAATTTTTAGCGTTGAATTTGTATTCTTTTACCTATTGGAGTTCTTAGACggtaaatttatatattttaaaattgtatCATGAAGTTTCTGGTAGTGGATAACTCATCGGAAAGTCGATAATTCATCGAAAGATTTTCGTAAATTTACATATGGAGAAATTCTCATGTGTCCATTTTTCGATGTTCGTGTTAATCGATAACTCATCGGAAAGTCAAAAAGTCGTCGAAAGATCTCCGTGGATATTTATatgaagaaaatatagatGGGTTCCTGTTAATCGATAATTCATCAGAAAGCTAATAATTAATCGAAATTTTCCCGGACATTCGAGTATCTCCTGTTTTCATTGGCTAAATCATATCGGACAATGAAGAAAACCAACTTCGgctttgaatttatttattttaggtttttggaatgtaattttgtaaagaaaaatggtaaaatatgggaaattagtttaaaaaaactattatattGTTGTATATGTTATGTTGTTATTGAATAACTTTAGATATTTGTAGAATTACGGCAATGAATATTGACTGTTACGATATCCTTTTTATAAATCCTgcaatgctttatttttcgcgtttgaagttaaaattattcttttgattttttattatgaaattaaatgaaatttgacgtcaaaggCGATAAATAAGGATGTATTAATAGGGACTTAGataatatttaattatatattaattataaatttatccaaaacttttaataaaataCCCACACACTTCCTCTGAA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q4V8Y6	Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Danio rerio OX=7955 GN=ergic1 PE=2 SV=1
Q969X5	Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Homo sapiens OX=9606 GN=ERGIC1 PE=1 SV=1
Q9DC16	Endoplasmic reticulum-Golgi intermediate compartment protein 1 OS=Mus musculus OX=10090 GN=Ergic1 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007353 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13850 all species →	ERGIC_N	Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC)	Domain	Interproscan
PF07970 all species →	COPIIcoated_ERV	Endoplasmic reticulum vesicle transporter	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR039542 all species →	Domain	Endoplasmic reticulum vesicle transporter, N-terminal	Interproscan
IPR012936 all species →	Domain	Endoplasmic reticulum vesicle transporter, C-terminal	Interproscan
IPR045888 all species →	Family	Endoplasmic reticulum vesicle transporter	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10984 all species →	ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN	Interproscan

Gene Ontology

No Gene Ontology signature was detected for ENSOJPP00000028746.1. This gene does have a gene model — the search simply returned no hit.

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20365	ERGIC1; endoplasmic reticulum-Golgi intermediate compartment protein 1	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.