Gene detail

Detailed information of ENSOJPP00000029577.1 in Anthopleura xanthogrammica

Genomic Location: not available for this species
NR annotation: XP_031568393.1, WD repeat-containing protein 6-like [Actinia tenebrosa]
Species Anthopleura xanthogrammica · all data for this species · gene families

Sequence

CDS

ENSOJPT00000034193

ATGGTCACAGCACAATCGTTTTTACCAGGAACTACAGAACAGTTGAAACTAAACAAGAAGGGTGGAGTAACTATTGACTCTCCAAGATCTGTTTCTTTGGTGTCACATAAAACGTCTTTGATTATGACATCTAAAGGTTACTTGTATGAATATAATTGGAGAGAGAAATCAGGAAACACCACAGCATTTGATGACCAGCCAGAAGGTTCAAAAACAGTTGAAGAGCAGACATCCAGTGGATGGAGGCTGTTGTTGCATGACCCAAGCTATGCATCATACAGTTTAATGGCAGTGTCTTCTGATCACCAGTACGTAGCATTTGGCAACTTGCAGGGAAGCATCAAGGTCCAAGAAACAAgtttttctTCAGAAGCTACAGAAGTGAAACCTTTCACAAGTAAAGTATTGAGTCTGCTTTGGTCTGTTCAAACTGCTTCACACAGTCTTTTCTCTTGTGGACCAGAAGGAATAATTATTTGGTGGCATGTGTTCAAAGATAGTCAAGGAGTATTACAAATGGAACAAGTTCATACATTTTCTATTCCATATTCAAAACAACGATGGGCATCAGCTGTAGAGGTGTTGGATCAAGGTGTTGTGATGGCAAAAGagcaagaaagaagaaaaggaaattgtCACATAGTATTTGGGGATAGGAAGGGTTCTATTCACTTGTTTGATGCTAGAGGAAGTAGCCAACACGAGGTCCTAGGTCCAGTCCATTCATTACCAGTTATACATGGTCATATTGGAGTGACACAGCTGTGTGCTCATGAAAACAGTCTATACTCTGCTGGTAGAGATGGAACATATCGCCAATACCAACTCTTGGATTCTAGCCTTGAAGTGATTGACACCAAAAAGGTATTCAAAGGATTGGAATGGGTTGAAAAGCTAATGTTTATTCCAACCGGTGACCTGGTGATAGCAGGATTTCACACGGCATATTTCATAGTATGGAGTGTTGAAAAAAACCAAGTTGTATTCAAAGTCAAGTGTGGTGGAGGACATCGGGCTTGGGACTTTGCCCTGAACCAAATTCCAGAATCAAGAAATGTTGAAGCTGTGTTTACATATTTGAAGGGAAACTCCATCAATGCACACTTGGAACAGCTGAGAAATTCCATAGCAAAACCTGTATTTCAGACTGGTTTTCATGGTCGAGAAGCAACATGCCTGTGCTACGTTGATAGCGTGCCTTTTGGTAATCAAGGATTCCCCCGGCATCATGTGTTCCTGACAGGAAGTGAAGACACCACCATAAACATGATGTCATATAACAGCACAGTTGGTTGTTTAACAAAGGTATTCACTGCACAGGGACATATTTCTAGCATACGAGCATTAAGTGTTACCCCTACATGTACACGCATAGGAGAGTGTAATAACACAAAATACTTACTATTCTCTGGAGGAGGAAGAGCATCTCTCAGATGCTGGCGAGTAGATCTTTCAGCTGTTAAGATCAGCAACAATGAGTGTGTGGCTTCGAGTCCGCCCGTTTCTCACATATGCGAGTATTCTTCTCGATCCAGTAATCAAAGAAGAAAGCGCAGAAGACAGGTCGGTCAAAACATCCACTCAGAGATTCGCTTTATGTCCTTAACGTCTTTGTCTATCTCTGTTATTATGGACGACGAGAGCTTTCAAGATAGGGCGCGATATTTGTATGGTATAGCTGCTGCTTGTTCCGATGGATTCGTCAGGATCTTTATCTTCGATGAAAAGGACTCGAAGTTCTTTCTTGTCGCACAATCTGATTACTTACAACGGTGTGTCTTGACTGTAGACCATCTCATTCATCATACCCATCCAGGACATCATAGTGTATTGGTATTTGCTGGCGATACTGCAGGCAAGATCTCTGTGTGGGACGTTACTGATCGCCTTATTGAATACATTAGTGAAGAAGCTGTTGTTACGACAAAAGGAAGCTCATGTAGCTCTTCTTCAGTAAAGGAACATGAAAACCCCAATTTTGCATGTATAACTCCAGTTGAAAACTCTCTTGGTCGGCCTCTACATGTGTTCAAAGCACATCAATCTGGAGTTAACgatatttctatttataaa

Transcript

ENSOJPT00000034193

gattaaaaataaaacaagtctGCTATCATTTCCTGATCTGATATTGGATGTTCATTGGTTACATAGTAATAATGGAAAATCCAATTATGaagttgccatagcaacagcCCATAATGCTGTTTGGTATTTTAACATGGAGACAGGCATAAAGTCGCAGGTTGCACAGTGTGAAGAAAACAGTATATTGTAAAAGTATCTGGAGTCTAGCCATATGTAAAGATGAACATGTAATTGCTACTGGTGGTGGAGATGGAAGTATTAGACTTTTCTCCTTGGATGACATCAACACCAAAGAACCTATGGTCACAGCACAATCGTTTTTACCAGGAACTACAGAACAGTTGAAACTAAACAAGAAGGGTGGAGTAACTATTGACTCTCCAAGATCTGTTTCTTTGGTGTCACATAAAACGTCTTTGATTATGACATCTAAAGGTTACTTGTATGAATATAATTGGAGAGAGAAATCAGGAAACACCACAGCATTTGATGACCAGCCAGAAGGTTCAAAAACAGTTGAAGAGCAGACATCCAGTGGATGGAGGCTGTTGTTGCATGACCCAAGCTATGCATCATACAGTTTAATGGCAGTGTCTTCTGATCACCAGTACGTAGCATTTGGCAACTTGCAGGGAAGCATCAAGGTCCAAGAAACAAgtttttctTCAGAAGCTACAGAAGTGAAACCTTTCACAAGTAAAGTATTGAGTCTGCTTTGGTCTGTTCAAACTGCTTCACACAGTCTTTTCTCTTGTGGACCAGAAGGAATAATTATTTGGTGGCATGTGTTCAAAGATAGTCAAGGAGTATTACAAATGGAACAAGTTCATACATTTTCTATTCCATATTCAAAACAACGATGGGCATCAGCTGTAGAGGTGTTGGATCAAGGTGTTGTGATGGCAAAAGagcaagaaagaagaaaaggaaattgtCACATAGTATTTGGGGATAGGAAGGGTTCTATTCACTTGTTTGATGCTAGAGGAAGTAGCCAACACGAGGTCCTAGGTCCAGTCCATTCATTACCAGTTATACATGGTCATATTGGAGTGACACAGCTGTGTGCTCATGAAAACAGTCTATACTCTGCTGGTAGAGATGGAACATATCGCCAATACCAACTCTTGGATTCTAGCCTTGAAGTGATTGACACCAAAAAGGTATTCAAAGGATTGGAATGGGTTGAAAAGCTAATGTTTATTCCAACCGGTGACCTGGTGATAGCAGGATTTCACACGGCATATTTCATAGTATGGAGTGTTGAAAAAAACCAAGTTGTATTCAAAGTCAAGTGTGGTGGAGGACATCGGGCTTGGGACTTTGCCCTGAACCAAATTCCAGAATCAAGAAATGTTGAAGCTGTGTTTACATATTTGAAGGGAAACTCCATCAATGCACACTTGGAACAGCTGAGAAATTCCATAGCAAAACCTGTATTTCAGACTGGTTTTCATGGTCGAGAAGCAACATGCCTGTGCTACGTTGATAGCGTGCCTTTTGGTAATCAAGGATTCCCCCGGCATCATGTGTTCCTGACAGGAAGTGAAGACACCACCATAAACATGATGTCATATAACAGCACAGTTGGTTGTTTAACAAAGGTATTCACTGCACAGGGACATATTTCTAGCATACGAGCATTAAGTGTTACCCCTACATGTACACGCATAGGAGAGTGTAATAACACAAAATACTTACTATTCTCTGGAGGAGGAAGAGCATCTCTCAGATGCTGGCGAGTAGATCTTTCAGCTGTTAAGATCAGCAACAATGAGTGTGTGGCTTCGAGTCCGCCCGTTTCTCACATATGCGAGTATTCTTCTCGATCCAGTAATCAAAGAAGAAAGCGCAGAAGACAGGTCGGTCAAAACATCCACTCAGAGATTCGCTTTATGTCCTTAACGTCTTTGTCTATCTCTGTTATTATGGACGACGAGAGCTTTCAAGATAGGGCGCGATATTTGTATGGTATAGCTGCTGCTTGTTCCGATGGATTCGTCAGGATCTTTATCTTCGATGAAAAGGACTCGAAGTTCTTTCTTGTCGCACAATCTGATTACTTACAACGGTGTGTCTTGACTGTAGACCATCTCATTCATCATACCCATCCAGGACATCATAGTGTATTGGTATTTGCTGGCGATACTGCAGGCAAGATCTCTGTGTGGGACGTTACTGATCGCCTTATTGAATACATTAGTGAAGAAGCTGTTGTTACGACAAAAGGAAGCTCATGTAGCTCTTCTTCAGTAAAGGAACATGAAAACCCCAATTTTGCATGTATAACTCCAGTTGAAAACTCTCTTGGTCGGCCTCTACATGTGTTCAAAGCACATCAATCTGGAGTTAACgatatttctatttataaaG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q99ME2	tRNA (34-2'-O)-methyltransferase regulator WDR6 OS=Mus musculus OX=10090 GN=Wdr6 PE=1 SV=1
Q5XFW6	tRNA (34-2'-O)-methyltransferase regulator WDR6 OS=Rattus norvegicus OX=10116 GN=Wdr6 PE=1 SV=2
Q9NNW5	tRNA (34-2'-O)-methyltransferase regulator WDR6 OS=Homo sapiens OX=9606 GN=WDR6 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004784 (this species only)

Pfam domain

No Pfam domain signature was detected for ENSOJPP00000029577.1. This gene does have a gene model — the search simply returned no hit.

InterPro

InterPro term	Type	Description	Source
IPR036322 all species →	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR015943 all species →	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR001680 all species →	Repeat	WD40 repeat	Interproscan
IPR051973 all species →	Family	tRNA Anticodon Loop Methyltransferase Regulator	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR14344 all species →	WD REPEAT PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0030488 all species →	Biological Process	tRNA methylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24737	WDR6; WD repeat-containing protein 6	-	Domain-containing proteins not elsewhere classified	ko04990	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.