Gene detail

Detailed information of ENSOJPP00000030369.1 in Anthopleura xanthogrammica

Genomic Location: chr5:7763126...7772672
NR annotation: XP_031556595.1, uncharacterized protein LOC116293318 [Actinia tenebrosa]
Species Anthopleura xanthogrammica · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSOJPT00000035051

ATGGAATGTGAAAGTATCGGTCTTCCATGGTCTTCAAAAGAAGATGGCTTAACGTACAAGACTAAACATCTTGGATGTTTCAAAGATTCAGCCAATTCGACAACAGGCAACATTCCATCGCTAGAAAGCATTGATTCTCTACTAACTGGAAGCTACAAAAAACGAACAGATGCTGTTTCAAAATGTGCAAAAGCTGCATACAGACGAGGTTTTGATGTGTTTACTCTTCAAAAAGGCGGGAAATGTTTAGCAAGCCTGTCAGAAAACGTGTATTCTAAATATGGCATTAGTAATGAATGTGGTCCGTCTGGAAAAGGAGGGATGTCAGCAAACGatgtttatataataaaacGGACCTGCCCAATGAACGTTGCTATGTGTGATTGGAGGAAAAATGGCACTCAgtttattgaaaaagaaagaatgaagaaattcttttgtgaAAAAAACTTTGTGAAAACAAAGTCAACATACTTTCCTGTAACAGTGCAGCTGCTGAATGGAGTCGTCATTTCATCAGAAGGAATATTTGACCTGCAAAAACAGTTCACTATCTGTTTCTGGGTGAAGTGTCTTTATCCTGGTTTCTCAATAAAACTCATGGACACAGCCAAAAGTACCCCAATACGTATCAAACAAGAAAGCTGCCAGCTTATTTTTATGCTTCTTGGCATTACTTCGAGCGCTGAACACTGTACCTGTAATGGCAGCTGGAACCATTTGTGCTTTACGTGGAGATCTGTTTCTGGCACAtgggaaatatatataaatgggCAGCTGAACAGTTTTGGTAGAGCTTGGAATCGAGGAAAGGTTTTACCTGttttaaaacGTATTACTTTGAAATACATTAAATCGGATGTTAAAGTATCAAATGGCCCGCCCGCTTCATTCACTGGACTTAATATttggaaagaaatatttcctcCAGAGGAAATACTGCGCATGTCATATGGATGCAGTGGGGAAGGGGCCAGTGGTGACGTCATATCTTGGGAGAGCCTGAAAAGTAAACTAAGAGGAAATTACCAGATCAGAAACCATGTCGACTGTCTCTTTGAAAAAGactTATTACTTATGAATTCCTTATCATCCATAAATGGAACGGCTGAATTGACTCGGTGGTTCAATCGATCTGATACAGGAAAAGCAAAGTGCATGAGGTTTCTTTATATGATGTTTGGAACAGGTGGCTCACTGTCACTAAAGATTTTACAGAAAGTTACAGTAACTGGGGATAAAGTGGTATGGATAGATGACAATGCTACTAAGCCAGTGTGGAAAATAGGAGAAGTTTCCTTAGGGACGGTAACAAAGTATAAGGTGACCGTAAGAGGACAATTCCAGGGAAATTCTTTTGGATTCATAGCCTTAGGGAGTTCATCTTTTACAAATGGATACTGTAAAATTGGACAACATTATACTGAAAAAGCTTGTAGCATGGTTTTAACTAACCTGTCAGGAGTGATTACATCACCTCTGTATCCAGCGGCCTATCCTCCAGGATCTTCATGCACATGGTATATCAGAGTACCCGAAGGAATGGTAGTTAGACTGTCTTCGCATTTCTTTGCACTGCATTTCAACCCACGGTGTAATGAGGACTACATAGCTGTCTATGACGGGCCATCACGTGATCACTCACCGATGATTGGCAGATATTGTGGTTCATCGTTTCCTATGTTCGAGTCAAGTTCGAACACAGTCACAATATTGTTCAATTCTACTACTCCTTTTAAATATAAAGCTGGCTTCGAGATAAACTATTTTACAAGAgTTGAACCTCCTGGTGCAAAGAACTCAGCTCATTGCCCTGCAAGCTGCAGATGTTTTTATGTTTCTGGTGACAAACAACGTTTTGTTGTTGAAGGCAAATCGTTGACTATTGTACCAGGCAACATTCCAGATGATACAGCAGTCTTgTTACTTGccaataataaaattaatcgCCTGAAAATGAAAGCATTTAGATTCAAAAGACTGTTAGAGTACATaGATTTGAGTAACAACAAACTGTTATACATCGATGACAGAGCATTCAGTGATTTGGAGTCTATACACACAATaAAACTTAATATGAACTTCCTAAGAAGTCTTGGCCAACAGCCTTTTCATGATCTGAGCTCGCTACAAGTATTGGACCTGGCGGAAAACTTAATCGATAAAATCCATCCTGATACTTTCTACACCATGGTCAATCTTAAAGTTCTGAGCTTACGATCCAACTATATATTTGATATCGACCCGAAACACTTCAGAGGCAACTCCGAGCTGCAGTATCTCTATTTACAACATAACCAGATCGAGCGAATT

Transcript

ENSOJPT00000035051

ACCTGAGAGGTGGCGTATTTGCAGGTGTAAGAGGCCTGTCCCTTATTGCCATGGAATGTGAAAGTATCGGTCTTCCATGGTCTTCAAAAGAAGATGGCTTAACGTACAAGACTAAACATCTTGGATGTTTCAAAGATTCAGCCAATTCGACAACAGGCAACATTCCATCGCTAGAAAGCATTGATTCTCTACTAACTGGAAGCTACAAAAAACGAACAGATGCTGTTTCAAAATGTGCAAAAGCTGCATACAGACGAGGTTTTGATGTGTTTACTCTTCAAAAAGGCGGGAAATGTTTAGCAAGCCTGTCAGAAAACGTGTATTCTAAATATGGCATTAGTAATGAATGTGGTCCGTCTGGAAAAGGAGGGATGTCAGCAAACGatgtttatataataaaacGGACCTGCCCAATGAACGTTGCTATGTGTGATTGGAGGAAAAATGGCACTCAgtttattgaaaaagaaagaatgaagaaattcttttgtgaAAAAAACTTTGTGAAAACAAAGTCAACATACTTTCCTGTAACAGTGCAGCTGCTGAATGGAGTCGTCATTTCATCAGAAGGAATATTTGACCTGCAAAAACAGTTCACTATCTGTTTCTGGGTGAAGTGTCTTTATCCTGGTTTCTCAATAAAACTCATGGACACAGCCAAAAGTACCCCAATACGTATCAAACAAGAAAGCTGCCAGCTTATTTTTATGCTTCTTGGCATTACTTCGAGCGCTGAACACTGTACCTGTAATGGCAGCTGGAACCATTTGTGCTTTACGTGGAGATCTGTTTCTGGCACAtgggaaatatatataaatgggCAGCTGAACAGTTTTGGTAGAGCTTGGAATCGAGGAAAGGTTTTACCTGttttaaaacGTATTACTTTGAAATACATTAAATCGGATGTTAAAGTATCAAATGGCCCGCCCGCTTCATTCACTGGACTTAATATttggaaagaaatatttcctcCAGAGGAAATACTGCGCATGTCATATGGATGCAGTGGGGAAGGGGCCAGTGGTGACGTCATATCTTGGGAGAGCCTGAAAAGTAAACTAAGAGGAAATTACCAGATCAGAAACCATGTCGACTGTCTCTTTGAAAAAGactTATTACTTATGAATTCCTTATCATCCATAAATGGAACGGCTGAATTGACTCGGTGGTTCAATCGATCTGATACAGGAAAAGCAAAGTGCATGAGGTTTCTTTATATGATGTTTGGAACAGGTGGCTCACTGTCACTAAAGATTTTACAGAAAGTTACAGTAACTGGGGATAAAGTGGTATGGATAGATGACAATGCTACTAAGCCAGTGTGGAAAATAGGAGAAGTTTCCTTAGGGACGGTAACAAAGTATAAGGTGACCGTAAGAGGACAATTCCAGGGAAATTCTTTTGGATTCATAGCCTTAGGGAGTTCATCTTTTACAAATGGATACTGTAAAATTGGACAACATTATACTGAAAAAGCTTGTAGCATGGTTTTAACTAACCTGTCAGGAGTGATTACATCACCTCTGTATCCAGCGGCCTATCCTCCAGGATCTTCATGCACATGGTATATCAGAGTACCCGAAGGAATGGTAGTTAGACTGTCTTCGCATTTCTTTGCACTGCATTTCAACCCACGGTGTAATGAGGACTACATAGCTGTCTATGACGGGCCATCACGTGATCACTCACCGATGATTGGCAGATATTGTGGTTCATCGTTTCCTATGTTCGAGTCAAGTTCGAACACAGTCACAATATTGTTCAATTCTACTACTCCTTTTAAATATAAAGCTGGCTTCGAGATAAACTATTTTACAAGAgTTGAACCTCCTGGTGCAAAGAACTCAGCTCATTGCCCTGCAAGCTGCAGATGTTTTTATGTTTCTGGTGACAAACAACGTTTTGTTGTTGAAGGCAAATCGTTGACTATTGTACCAGGCAACATTCCAGATGATACAGCAGTCTTgTTACTTGccaataataaaattaatcgCCTGAAAATGAAAGCATTTAGATTCAAAAGACTGTTAGAGTACATaGATTTGAGTAACAACAAACTGTTATACATCGATGACAGAGCATTCAGTGATTTGGAGTCTATACACACAATaAAACTTAATATGAACTTCCTAAGAAGTCTTGGCCAACAGCCTTTTCATGATCTGAGCTCGCTACAAGTATTGGACCTGGCGGAAAACTTAATCGATAAAATCCATCCTGATACTTTCTACACCATGGTCAATCTTAAAGTTCTGAGCTTACGATCCAACTATATATTTGATATCGACCCGAAACACTTCAGAGGCAACTCCGAGCTGCAGTATCTCTATTTACAACATAACCAGATCGAGCGAATTC

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000149 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00354 all species →	Pentaxin	Pentaxin family	Domain	Interproscan
PF00431 all species →	CUB	CUB domain	Domain	Interproscan
PF13855 all species →	LRR_8	Leucine rich repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013320 all species →	Homologous_superfamily	Concanavalin A-like lectin/glucanase domain superfamily	Interproscan
IPR001611 all species →	Repeat	Leucine-rich repeat	Interproscan
IPR001759 all species →	Family	Pentraxin-related	Interproscan
IPR000859 all species →	Domain	CUB domain	Interproscan
IPR030476 all species →	Conserved_site	Pentaxin, conserved site	Interproscan
IPR000998 all species →	Domain	MAM domain	Interproscan
IPR035914 all species →	Homologous_superfamily	Spermadhesin, CUB domain superfamily	Interproscan
IPR032675 all species →	Homologous_superfamily	Leucine-rich repeat domain superfamily	Interproscan
IPR050328 all species →	Family	Multifunctional Developmental and Immune Receptor	Interproscan
IPR003591 all species →	Repeat	Leucine-rich repeat, typical subtype	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24373 all species →	SLIT RELATED LEUCINE-RICH REPEAT NEURONAL PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0005615 all species →	Cellular Component	extracellular space	Interproscan
GO:0031012 all species →	Cellular Component	extracellular matrix	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOJPP00000030369.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.