Gene detail

Detailed information of ENSOJPP00000031187.1 in Anthopleura xanthogrammica

Genomic Location: not available for this species
NR annotation: XP_031549699.1, BRISC complex subunit Abraxas 2-like [Actinia tenebrosa]
Species Anthopleura xanthogrammica · all data for this species · gene families

Sequence

CDS

Transcript

ENSOJPT00000036045

CGCGGACATAGGCTGGCCAGCAGTGTATTTCCGTGTTGATCCAAGATGGAGGTGCGAGTGTCAGGACCTGTTTTGGCTTCTTTATTTCTAGAACTGGCAAATGGCAAAGGAGACTTGGAAGGGTTTATGTTGGGAGATACTAGTGGGAGAACTGTTAACACAATCAGCGATTCTTCCTCTCAGCATTTGAGTTTCGAACGAATTGCAACTATTCAAGGATTTATCCCGCGAGAAAGAGGTTTTAGttTTTATGACAATGTGGGATGCattgacaagaaaaagattGAACTACTTCTTGGAAAAAATAAGGAGaatgtgattggttggtaTAGATATAGAAGGAACACACAACCTCTTGTTTCTATGAGAGAAAGACATGTTCATCATAATCTCATCAGGgaaataaattttacaccatCCAAAGAATtcctttttattgtttttactgCATCCACTTCAGCTGTAATGTCTGTACACTCCTTTGACTATAGTATTGTTTCCTCTAGTCATGTAGCTGGCCCCTTTAAAAACCATGAAATGAAAGTAGTTAACTTGGGTGACACAAGCCACTCTGGGTATAGACTACAACCAGAAACAATAAGAACCCCATCGAAAATATTTACAGatgttataaatatatacagAGAAGACTTTATTGACAAGGATGGATGCTTACAGCAGCCGTTAGCTACACATTCAATGTGTATTTCTATAATGACCAAAATGAAGGAGCTTCTAACAGAAGTTAACGATAGTGAATCCACAGTTGGTGTAATGACAGAACAGGTTGAAATGTTGAGGGAGaagctggaaaaaaagaagagagaaaTAAGCAGAAAACTGGAACAAAAAAGGCTACTGGAACAACGTGAAGTACAAACAGCAGAGTTGATTCAAATTACACAAGATActgaaaaacgagaaaaacaaaTGTCAAAATCAAAGCATAGACGTTCCAGCAGGTCTGGTGCTAGCAAAACACATAAAAGAGAAGTAGAACACATGGATACTTCAACAAGTAATAACTTAATTGATTTTGCTGATGAAAGCACTGTCAGTCGACCATCAAACAAGGCTGAAGTAAAACAACACTCACTTGGAAATGACTACAAGAATACCAGGAAAGATGTGCCTGCTTCACAAACGCTTGatgtagatgatgatgaaactcAGGACTATAGCTTGCCTGATGACAAATGTAATCAAGGAGTATCTGGATTAACAGAGCAATCATTACTGGAGTCTCCAACATATTAAAACCACAATCATACATTATTTATACTAGGTCAATAACATGTCCACACCTTCTCAAGAATGgggagattttatttttaaagtgtTTTACGACAGGGGTCAGAATGGATGGAAAATCAAGAATAATTTCTCTGTAGCAAAGACTGGGTATATTTTCTTGATACACAAACATAATCAATGGTAATAACAGTAACTCTACTCTTAGTGCTTTATAGATGTAACATAATAAAAGGTTTGCACAagagcagatatcagagtaaGTTACACTCTCTTGctttcatataattttttcaagttgaggaatttgggtcagtttctatacagtCAGTTACTCTATTTTTCAACCAAATGCCTCAACTTGAAACAATCGTTTGAAGGCAATAGAGTGTAAAACTACAGTGGCTTCACTTTCATGTTTATCATTATCAGCCTCACAGGGGTTTGATAGAGATATACAGTTGGACCTCTACACAATGGCTGTCTTcgggacaaaattttgtggCCATTGTAAAAAGGTTCAAATTACAGCTGTATATGTATAAACTCATTGGTAACTAGGACAACATTTCCagctctttcttggtgttgcagaaCACCAGTCCTGAGGAATGAACACAATTAAACAATagcaaagaacaaagaacccATTTTAAAGTCTTCCATTCAAATATGGCTGCCATATTCACAACTGAAAAACCAAAAGTTTTGGGGCTTTTTCAGGCATTTTCCTTGTAAGAGTAGAATATATCTGGCCTGTTAGGTCCAGTTTAGACATCAAATTTTACGTGCCGAATGTAATGtgtaatgcaaatgagcaaaacctattgtttgagttcatttgcattagattcagcacatgtgaaatttaaCGTCTAAAccgattcttttttttcttcaaaaaaataacCTCTGCTCCTTTTTAGATGTATTTGTTTCCCAATATAATAAGCTATAATAAGCCCTTACTGAAAATAAGCCTGCAAAAAGATTCTTAGAGCAAAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A0A8M3AJY3	BRISC complex subunit abraxas 2 OS=Danio rerio OX=7955 GN=abraxas2 PE=1 SV=1
Q3TCJ1	BRISC complex subunit Abraxas 2 OS=Mus musculus OX=10090 GN=Abraxas2 PE=1 SV=1
Q5ZHS0	BRCA1-A complex subunit Abraxas 1 OS=Gallus gallus OX=9031 GN=ABRAXAS1 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007692 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF21125 all species →	MPN_2A_DUB_like	BRCA1-A complex subunit Abraxas 1 MPN domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023238 all species →	Family	FAM175 family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31728 all species →	ABRAXAS FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0031593 all species →	Molecular Function	polyubiquitin modification-dependent protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20799	FAM175B, ABRO1; BRISC complex subunit Abro1	-	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.