Gene detail

Detailed information of ENSOJPP00000032644.1 in Anthopleura xanthogrammica

Genomic Location: chr1:22138776...22142927
NR annotation: XP_031564698.1, stonin-2-like [Actinia tenebrosa]
Species Anthopleura xanthogrammica · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSOJPT00000037900

ATGGCGTCTTTCAAAAGCAAGGTGCTCAAAGAACCGATAATGGATGACGAAAAAACCGAAGAAATTGATGCTGAAGAGATACAAGACGAACTGGATATCAAAGGAAAACCTATAACCGACTTAAAGACGAGTCAATTTGGAGAAAAGGGAAGCTCTAAATCATCCGAAGCCGAAATAACGAAGACACCGGTTTCTAACGCTACGTTGAATGCAGCTGGAAAGTACGCTAATGGCGAGAGTAAAATCTTCCAAGCGACAAACGACGCTTCCTCGGCTGTAATTAAACAAGGAAAAGCCCAGACAGCGACGTTAGGAGAAGTTAGAGGAAAAAATTCATCGGCTAAGGTTGGTTTGGGATGGGTAAGTTTTGAGGAAGATGGCAATAAAAGGGCTGGAGCTGACCTAGTAACACAACAAACCACGCAGGGAACTCCCCTTTCTACTGTTGTCAACGGAGATTTGACTCATCAGGCCGCTAAAATAACCGAGTCTAAAACCCAAAGAGCCGTAGAAAAATCTAGTCAAAAGTCTTCTTTGAAAGAGGACACAAAAGCTCAAGAGGCAAAATCGAATTATTTTAATCCTTCGGCACAAGGTGGCTTAATTAATGGACATGTTACCATAAATGTCGCTGGAGTTGGCGGTTCTTCGCCTCATGATGTCGATAGTGGACCAGTTAGCCCTAGCTGGGTGGTTTTTGAAGATTCTTCAGAAGCTGGTAAAGCCAAGAGATTATCATCAACTACTGGTAGCTCAGGGGTCATGAAGGAGGCTGTCTCCTCTTCAACTCCACCCAAACCGAACTGGGTGACTTTTGAGGAAgcaaataaacagaaaaaatccATCCGAGAAGACATGAGTGTCAATGTTTCAATTCCAGATCAAGTATGTGCGACCCCATCAACACCTAGTCCCAATCCTTTCGCAAATGCACCCATCATTACACCAAAGCCGACTTCCAGTCTGTTTCAGAGTCCCCCACCATTGACTGTCGTCACTAGTACTAATCCATTTCATTCTGAGAATGCCACTCAAGGGCTAACGACTGTTGACGTTTCACCATATCCTAGTGGGGTACCAGCACAAACTGCGTCATCTGAGCCATCATCTACTGATCCTTCCAAGTGGGTATTTCATGATGTTAGTGTTTTTGAGAAAGATTTGAAACTTGACCAAACCAATAACACAGGGCCAGTTAAGGCTGACAATAAACCACTAGAGGTTAGTCCTGTATTACCAGCAACCGCAGCAGAACATATTGAAGATGGTAttgcagcagcagcagcagccgCTGAAGTGAATGAAGAAAAACCAGCCATTTTACCAGAATCAGATGATGAGTCTATCGGCGAAGATTTTACGCTAGCAACCACAAATACTTCCTGGAATATGCTTCTTCGTTACCCagataagaaaaagaagctcACTACAAGAGAATGGAAATCCGTGGTAATTAAACTTGATGGCAACACTTTAAAGATTTTTGAGGAATATGAGCTCTCAGCACCATTCAGGGAAATTCCACTCCAAGCTAGTTTCAGTTTTGATCAACTAAGATTGCAACCAAGTGGTCGCCATGGAAAAGTTCACACGACAAAACTGGTGTATTTGAATTACAAGGAGACGAGGAGTGTGCGGCAGAAGGGAACATACGAACATGTGAGTGAAGGAATGCCGATCATAAAAGTTGGCTCATTGAGTCACTTAATTATTAGAGAGTTCATGGAAGCTATAGGAAACTCGATTCGCACTCTTCCTGCTTACAGAGATAGGGGAATCACGTACCGCAAGGATGAAGTGTTTGTTGATGTGGATGACACTTGCTTTGCATTAGTAAGTGGTGATGGGAGCATTAAAAAACAAGGTGGAAATGTAAGAATAAAGGTAAGAGCATTTTTAACTGGAGATCCAGAATGTCAATTGGTTCTCAATGATATTGTCGTCAAGGAGAGAGAAGAAGCACGGCTGAGAGGGGAGCTGAAACCTCAACGTGTTCATCACTGGATTAAACTAAAGAACTGCAATTTCCACAAGTGTGCAAGTAATAACTCATTCCAAGAGTCTCACTCGATCATTTTCCATCCTTTGGATGCATGCACATTTGAATTGATGCAATTCAGAGTCAAACAGTACAAGCCTTTACCTCTCTTAGTTAAAGCCGCGCTCACTATTCACAGTGAAAGAAGGATTGAACTGAAAGCTGAAATAAAACTCTGTCAAGACACTAAAATGTCTAAATATGCGAGGAACAATGTCACTTTTAGACTTCCGATTCCTGAGACTTGGGTGCCCCTCTTCAGGACCGGTGGAGTTTTAGGAAGAGAGAAATCTATTAAGTCAAGCAAAGGGAAGCGAGCAGCAGGAATCAAGAGCAGATTGAAGCATTCTAGGTGTTCTATTGCAGCGAGTATTGGTACGGCACAGTACGAGCCAGAGTACTCGGCAGTAGTATGGAGGATTGACAAGCTACCTCTCATACAAAGTAAAGTTCCCGTTGATGCTCCTCAGACACTAAACTGTCTTCTAGAGCTGCCGTCTGGAATGGAATGCCCAGAGAACTTTCAGCCTTATGCCGAGCTAGAGTACGACATATCTTATGTCCTTCTTTCTGATACAACAGTAATTGCTGTCAAAGTATCTAACAGAAGTATCCCAGAAAAATGGGTTTGTTACAAGGCTTTTTACCAGTACCATATCGACATGGTTGTAGAGAGACCAAATAGTGGACCAATAAAAGACGTAGGTTGCACACAACAGTAA

Transcript

ENSOJPT00000037900

TGatagactgactgactaacCTGCTCTAATCTGTATGGCACGGGCTGTTCCCCCAAGAATACCGAAGAAATTATATCAGCTGTATCCAGTATTCGGTAAACAAAGTCCACAAGTCCAGGTTCAAAGAACAATCGATTCGGCAAACAGTGGAGCAATAACAGCTGTACTTGAACCATACTCTGGCAGACTTTGAAGGCCTTTGAATATTATGAAAAGGACATAATTAACTGAGAATATACTCAAATAAAGACAAGAGCTCAAAAGGACGGCTGGAAGACATTTCGTAATCTCGACCAAAAATGGCGTCTTTCAAAAGCAAGGTGCTCAAAGAACCGATAATGGATGACGAAAAAACCGAAGAAATTGATGCTGAAGAGATACAAGACGAACTGGATATCAAAGGAAAACCTATAACCGACTTAAAGACGAGTCAATTTGGAGAAAAGGGAAGCTCTAAATCATCCGAAGCCGAAATAACGAAGACACCGGTTTCTAACGCTACGTTGAATGCAGCTGGAAAGTACGCTAATGGCGAGAGTAAAATCTTCCAAGCGACAAACGACGCTTCCTCGGCTGTAATTAAACAAGGAAAAGCCCAGACAGCGACGTTAGGAGAAGTTAGAGGAAAAAATTCATCGGCTAAGGTTGGTTTGGGATGGGTAAGTTTTGAGGAAGATGGCAATAAAAGGGCTGGAGCTGACCTAGTAACACAACAAACCACGCAGGGAACTCCCCTTTCTACTGTTGTCAACGGAGATTTGACTCATCAGGCCGCTAAAATAACCGAGTCTAAAACCCAAAGAGCCGTAGAAAAATCTAGTCAAAAGTCTTCTTTGAAAGAGGACACAAAAGCTCAAGAGGCAAAATCGAATTATTTTAATCCTTCGGCACAAGGTGGCTTAATTAATGGACATGTTACCATAAATGTCGCTGGAGTTGGCGGTTCTTCGCCTCATGATGTCGATAGTGGACCAGTTAGCCCTAGCTGGGTGGTTTTTGAAGATTCTTCAGAAGCTGGTAAAGCCAAGAGATTATCATCAACTACTGGTAGCTCAGGGGTCATGAAGGAGGCTGTCTCCTCTTCAACTCCACCCAAACCGAACTGGGTGACTTTTGAGGAAgcaaataaacagaaaaaatccATCCGAGAAGACATGAGTGTCAATGTTTCAATTCCAGATCAAGTATGTGCGACCCCATCAACACCTAGTCCCAATCCTTTCGCAAATGCACCCATCATTACACCAAAGCCGACTTCCAGTCTGTTTCAGAGTCCCCCACCATTGACTGTCGTCACTAGTACTAATCCATTTCATTCTGAGAATGCCACTCAAGGGCTAACGACTGTTGACGTTTCACCATATCCTAGTGGGGTACCAGCACAAACTGCGTCATCTGAGCCATCATCTACTGATCCTTCCAAGTGGGTATTTCATGATGTTAGTGTTTTTGAGAAAGATTTGAAACTTGACCAAACCAATAACACAGGGCCAGTTAAGGCTGACAATAAACCACTAGAGGTTAGTCCTGTATTACCAGCAACCGCAGCAGAACATATTGAAGATGGTAttgcagcagcagcagcagccgCTGAAGTGAATGAAGAAAAACCAGCCATTTTACCAGAATCAGATGATGAGTCTATCGGCGAAGATTTTACGCTAGCAACCACAAATACTTCCTGGAATATGCTTCTTCGTTACCCagataagaaaaagaagctcACTACAAGAGAATGGAAATCCGTGGTAATTAAACTTGATGGCAACACTTTAAAGATTTTTGAGGAATATGAGCTCTCAGCACCATTCAGGGAAATTCCACTCCAAGCTAGTTTCAGTTTTGATCAACTAAGATTGCAACCAAGTGGTCGCCATGGAAAAGTTCACACGACAAAACTGGTGTATTTGAATTACAAGGAGACGAGGAGTGTGCGGCAGAAGGGAACATACGAACATGTGAGTGAAGGAATGCCGATCATAAAAGTTGGCTCATTGAGTCACTTAATTATTAGAGAGTTCATGGAAGCTATAGGAAACTCGATTCGCACTCTTCCTGCTTACAGAGATAGGGGAATCACGTACCGCAAGGATGAAGTGTTTGTTGATGTGGATGACACTTGCTTTGCATTAGTAAGTGGTGATGGGAGCATTAAAAAACAAGGTGGAAATGTAAGAATAAAGGTAAGAGCATTTTTAACTGGAGATCCAGAATGTCAATTGGTTCTCAATGATATTGTCGTCAAGGAGAGAGAAGAAGCACGGCTGAGAGGGGAGCTGAAACCTCAACGTGTTCATCACTGGATTAAACTAAAGAACTGCAATTTCCACAAGTGTGCAAGTAATAACTCATTCCAAGAGTCTCACTCGATCATTTTCCATCCTTTGGATGCATGCACATTTGAATTGATGCAATTCAGAGTCAAACAGTACAAGCCTTTACCTCTCTTAGTTAAAGCCGCGCTCACTATTCACAGTGAAAGAAGGATTGAACTGAAAGCTGAAATAAAACTCTGTCAAGACACTAAAATGTCTAAATATGCGAGGAACAATGTCACTTTTAGACTTCCGATTCCTGAGACTTGGGTGCCCCTCTTCAGGACCGGTGGAGTTTTAGGAAGAGAGAAATCTATTAAGTCAAGCAAAGGGAAGCGAGCAGCAGGAATCAAGAGCAGATTGAAGCATTCTAGGTGTTCTATTGCAGCGAGTATTGGTACGGCACAGTACGAGCCAGAGTACTCGGCAGTAGTATGGAGGATTGACAAGCTACCTCTCATACAAAGTAAAGTTCCCGTTGATGCTCCTCAGACACTAAACTGTCTTCTAGAGCTGCCGTCTGGAATGGAATGCCCAGAGAACTTTCAGCCTTATGCCGAGCTAGAGTACGACATATCTTATGTCCTTCTTTCTGATACAACAGTAATTGCTGTCAAAGTATCTAACAGAAGTATCCCAGAAAAATGGGTTTGTTACAAGGCTTTTTACCAGTACCATATCGACATGGTTGTAGAGAGACCAAATAGTGGACCAATAAAAGACGTAGGTTGCACACAACAGTAAAATAGGTACAGtaagttaatttttgttatAGTCCATATTCCATAACAGTTTGGCCATTTGTATTATAGCGTTCTTTAttaccactaccagaatcccttgcacacctCCTTCTAttcagtaattgtttttactaTTCCCCAGAggctagaaaattttaagCATTGTTGCTCCCAGTGGTATTTTTCTGATACTGGTGGTAAACTAACACCATAACGCAAATGGCCTATAagtttcaattttcattttcattcaaagtATAACTTAAAACTAAAGACAATTTTCCTTGCATGTGACTTAAAAACTcgtaaatatttaacaaacaaaatatgcATAGTTGGTGTACAATGTTGTGGGGAATAGTTTTCATCATTATGATTTAGTTTTGTAAGTATAGTTATCATTCTCTGAATCAAAGTATGGCTGCCTCTAGTGTacatttacacatttttttaaaagctttagtttcattgaaccctaaaacaatcTGGGCTGATTAAGGTCATGGCAcagcttactcacagatcaaaatgGGATcaaatttgtttgattttgtgaagggaggaaaactgtagaacctggagaaaaatgcTCAAATTCAGCTTATTACATttgtataataattattattgtaaacataaatgttgttccagtattaatattttttttaaaacaaattattttatcttattttgttttgactccAACTAGACCCAAACAATTTAACCTTTAATTTTTATACTAAATATGTGATGATCTTTTGAGTTTGTCTGCATTTTctataatattatgattattcaACCAGGGGAAAAACTAGAAAGCAGCTATATTTTGGTTCATGATTTAGTCGGTGGTCAACTATAAAGTCACAATTCCATTCACTCTATATATTTTGGAGttatgtttattttaaaaatgcattTATTTAATGACACCATCACACAAGAATGTGCGAAAATAATTAGATATGATATGTACTACAAGAAAATGGATGACTGAAGG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q09718	AP-2 complex subunit mu OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=apm4 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0007588 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00928 all species →	Adap_comp_sub	Adaptor complexes medium subunit family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036168 all species →	Homologous_superfamily	AP-2 complex subunit mu, C-terminal superfamily	Interproscan
IPR012320 all species →	Domain	Stonin homology	Interproscan
IPR028565 all species →	Domain	Mu homology domain	Interproscan
IPR050431 all species →	Family	Adaptor complexes medium subunit	Interproscan
IPR001392 all species →	Family	Clathrin adaptor, mu subunit	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10529 all species →	AP COMPLEX SUBUNIT MU	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0006897 all species →	Biological Process	endocytosis	Interproscan
GO:0016192 all species →	Biological Process	vesicle-mediated transport	Interproscan
GO:0030136 all species →	Cellular Component	clathrin-coated vesicle	Interproscan
GO:0031410 all species →	Cellular Component	cytoplasmic vesicle	Interproscan
GO:0035615 all species →	Molecular Function	clathrin adaptor activity	Interproscan
GO:0006886 all species →	Biological Process	intracellular protein transport	Interproscan
GO:0030131 all species →	Cellular Component	clathrin adaptor complex	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K20067	STON1_2; stonin-1/2	-	Membrane trafficking	ko04131	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.