Gene detail

Detailed information of ENSOJPP00000033892.1 in Anthopleura xanthogrammica

Genomic Location: not available for this species
NR annotation: XP_031563601.1, methylcytosine dioxygenase TET2-like [Actinia tenebrosa]
Species abbreviation AXANT · all data for this species · gene families

Sequence

CDS

ENSOJPT00000039231

ATGGACGAGGATTTGAATCAGACGAGCTCTAAGAGGCAAGAATCGAGAGAAAAGCGTAGTGGATCTGCGTCTGAGTACGACGAGTCTGTGCCTCGAAAGAAAAGACGACGATGTGGAACGTGCGAGCCGTGTATAAGGAAAGTTAACTGCGGTGACTGCAGCAACTGTGTGAATCGTAAGACTGGTCATCAGATTTGCAAGTACAGAAAATGTGTTCAactcaaaaagAAGACTTCTACTGTTTTGCCCCAACCACGAGAAAACACATCAAACGCTAAACAGGAATCTTCTGAACCTGGATCACCCGTAGAGGTGCAGTCTGCTCGCATAAGCCCAGCTAAAGTGGCCTCAGACAGCGATGAGGCTGAAATAGTCAGTGATTCGAACGAAACGGAGTCGAAACCACAAGCGCCGAGTAAACATATCGATATAGATGAGAAAGCGAAACTTTCTAGTCCAAGCAATCATCAAAGTGAAAATTCAAATATCCGAGAGGAAGTCGTGGCTGGTCTCAGCGCTACGATTTTGTGCCCTGAGGTGGTCGTCGAAGAGACTTCGTGCTCAAAAACCGCGATAGAACAGAACGCTTTGACATCGCCGAATAACACAGCTCCACGCTGCGATGAGAGCCCGGCACCCCAACCGTGTCGTTGTCAAGtTTCCCCTAAAGAGGAAGGCCCTGAATACACTCAGTTGGGCTTTGCACCAACAGTTGAAGGCATTCGAACcttgatggaaaaaaggtaCACCAACATCCGTGTTCTTAtgtattttgtaatatttgttttgcaGATAACGCACACAAATCGAGAAGGCAAGAACTCCCAAGGATGTCCAATGGCACGATGGgttGTAAAAAGATCTGGTCCCCACGAGAAAGTCCTAGTCGTGGTCCGTAAGAGAACGAATCACCAGTGTGATTTGGCTTTCCTTGTGTGCAGCATTGTTCTTTGGGATGGGATTCCCAGACCTCAAGCCGACTCACTTTACCGAGAACTGACCAATGTTATACCTGAGAATGGCTTGCCCACAGCAAGGAGATGTAACTTCAATGATAGCAAATCCTGTGCCTGTCAAGGAAATAATGAAGAAACTTGTGGCGCGTCTTTCTCGTTCGGTTGCTCGTGGAACATGTACTTCAATGGCTGTAAGTTTGCAAGAACAAAGAGCCCAAGAAAGTTCAAGCTACTCGACCCTTCTAAGGAGGAACACCTGGAAAATACAATGCAAGATATCGCAACATTCTTAACACCAATCTACAAACAAGCAGCACCAGAAGCCTTTGCTAATCAGATAAAGATTAAGGATGGTTCCGAGTGTCGCATCGGTAACGATGAAGGTGATCGTCCATTCTCTGGAATAACATGCTGCATGGACTTCTGCGCTCACAGCCACAAGGACAAACAAAACATGGATGGCGGTGCCACTGTGGTTTGCACGTTACTCAAGCCTGAAGCAGAAGCCGACGAGGAAGTCGAACAACTTCACGTGTTACCTATGTACCAACTGCTAGACAAGGACGGTAAGGTCGCGACTCCTAACTACGTCATGCCGGCTCACATTCGATCACCGCCCGATGGCGTCTCTCCTGGAGTCAAGGCAACAACAAAAGAGGACAAAGAGAAATCACAAAACgctataaaaacaaattccgAAGATCGAAAAGAAGCTGTAACGAAAAAGGAATATTCGCCTCTcactgaaaatcaaaataatccTTATGTGAACGGTGGTGTCTACGGTGACCGTTACCATAGTAACGGCATAGGTGGTCAAGCGCCCCCTTACGGTTATCCTACGTCGGTTGTCCATCATCACCCTGCAGCTAATCATATCATGAATGgttattataataatcattatagTGCCAAGTCTCATCTCCCGTATTACCCGTTCCTCGGTAGTAACCTATTCGTGGACCGGTTACGTTCGCCTGATGTTCGCTGGGTAGATGAGAACCATATCCCGTACCTCTACCGGACACACGGCGCGCATATGAACCACTATCCTCAACAGCAGCATTACCCAATGGAGTACCCAGAAGATCACAAGGGGATGTTTCCCCCTGTTCACAACTGGGGAATGCAGTCACCTCCCTCGAAGCCGTTTATTGAAGAACACCTTCGAAATGGTACCCATGGTGGAGAAGCGACCAAACCTAAAGCAGTTATTCACCACTACAGTGGAGCACCTACTGAATGGGGAAAGTCCCCCACAGATATCAAATATGTCGATGAGAAGGATGTTCCTATAATGCGGTCTAATAGTCCGGGGATGCAACATGAACAAGGGCGTTGCCTTCCTGTCAAGCGCGCACAACCTGGCAAACAGGGCGCGGAGGGGTCGCCGACAAAGAAAGTTTATAAATTCGATGAGGCGATGGGTGGTGTGGCACTTGCTCTAACACCTGGCTCCCTACTTATTGAAGTAGCCAAGAAGGAAATTCATGCAACAACACCCTTGAAAAACCCACAGCGTCACTCTCCTACTCGCATTAGTTTGGTATTCTACCAGCACAAGCAGCTCAACACGAGGTACCATGGCCTGGATGAATGGGAACAAAAGGTGGCGAGAAAAAAGATGCTTCTTGAAGAGGCGGTTGTAGAAAAGGGAGGCGAAAACACCTCGGGTGAAAGCGCACCGCATGTGAATTATTTAGATATGTTGGCTGAAACTGCTTTGTCTCGGGAAGATAAGGAACCTCAGTCTGTGCACCAACAAGCGATGACTTGGAAAATGGCTGGTGACAATAAACAACAACGTGAAGAGGTtcagaagaaaaataactttGGAGAGCCTGTAAAAACGGAGGTTGACAACAGTATATACAAGCGTCCAGTGAATCAAAACCCTTCAGTTGGAACTGAAGCGTTAAAAGAAAGTCGGCTTCCATCGTCACAGAACAATAGCAATAATGAATCGGGACAGAAAATCCACGCTGGAATGGATAGTCAACTTGGAAACCGAACGGGAATCGCGCGGGATCAGCTTCAGAAGCTACGCGAGCTTCGAGAAAGCGACATTGTCAGACACCTCCATGGCTGGCCACGTGAGCAATGTCTGCCCAATGGCATTGTCGCACCGAGAGGTCATCCCGAGGATCGTGTTTCCACAGGAGCGATAACTTGCCGAGCAAGTGTCATTGACCAAAACGAACGTGAACGGCATGTTCGCCATGCCGAATCGTTTCAATATTCTAAAGACAAGATGCGAGAAAATAAAACGTCCAATGCGCAGGGAGAAAACCGGTCTGTTTCCAATGTTTCGAATTACAGCGTTTCTAGGCTTCTAGGAAAGGACACTGAAGAAATCAAGAATCACACGGCTACTCGTCCTTCAAATGCATCGTCTACATTTTGCATTAGTAATATTCTGGGGAACACGACCAAGACTTCTGATGCGGATTCCAAGCGAGAAGAGACGGAACGATTACCCGAACCTACGAAACCCAAGTCACCGCCTGCTGTAGCTAAAACAAATGGTGAATGCATCGCAGAGATCAAGAATCATTGCCAAACATCTATACCCTCTGAACACGAGAGATCAGGCTACCCCGAGGCACCACCAAACCCTCACCAATATGGACCCACTCATCCTCAATACAAAACGGGACATTTTTGTGGTGGGCTGCCAGAAAAGGCATATTATGGAGCAGAGCATAGAATGCCCTTTGATGTACATTCAGAGCCTCACGCTCACCCTATGGCTCAGTACAGTCCTTATAAATTCGGCATGCCATTTCCAACCCAACCTACCTTCTTCATGCCATCATTTCATCCTCTGTTGTCTGCAAGCAATGGACTTGCCCCAAACCTCGCACTCGTCAACTCAAGGAACTATCTTTCGAGTTTGGCGAGTAACTATTCCCATGCAAAACGTCTCGAGGAATCGCTTCTTGCTCCCATCTCTACGGCGACGAGAACTGGACTAAGCTATCCAGTTGATAGCCTTATTACTGTTGCACCTTACTCGCAGACATGTGTTACTGGTCATTATCAAAACTGGCTTTGA

Transcript

ENSOJPT00000039231

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6N021	Methylcytosine dioxygenase TET2 OS=Homo sapiens OX=9606 GN=TET2 PE=1 SV=3
Q3URK3	Methylcytosine dioxygenase TET1 OS=Mus musculus OX=10090 GN=Tet1 PE=1 SV=3
Q8NFU7	Methylcytosine dioxygenase TET1 OS=Homo sapiens OX=9606 GN=TET1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005310 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12851 all species →	Tet_JBP	Oxygenase domain of the 2OGFeDO superfamily	Domain	Interproscan
PF02008 all species →	zf-CXXC	CXXC zinc finger domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR046942 all species →	Domain	Methylcytosine dioxygenase TET1-3, oxygenase domain	Interproscan
IPR002857 all species →	Domain	Zinc finger, CXXC-type	Interproscan
IPR040175 all species →	Family	Methylcytosine dioxygenase TET1/2/3	Interproscan
IPR024779 all species →	Domain	2OGFeDO JBP1/TET, oxygenase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23358 all species →	UNCHARACTERIZED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0008270 all species →	Molecular Function	zinc ion binding	Interproscan
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0006211 all species →	Biological Process	obsolete 5-methylcytosine catabolic process	Interproscan
GO:0045944 all species →	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan
GO:0070579 all species →	Molecular Function	5-methylcytosine dioxygenase activity	Interproscan
GO:0080111 all species →	Biological Process	obsolete DNA demethylation	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K24309	TET2_3; methylcytosine dioxygenase TET2/3	EC:1.14.11.80	Chromosome and associated proteins	ko03036	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.