Gene detail

Detailed information of ENSOJPP00000035511.1 in Anthopleura xanthogrammica

Genomic Location: not available for this species
NR annotation: XP_031566240.1, rho-related protein racA-like [Actinia tenebrosa]
Species Anthopleura xanthogrammica · all data for this species · gene families

Sequence

CDS

Transcript

ENSOJPT00000041158

GGATCCAACATCGGTTCCTCCAGTGCTAGATTCCTACTTGATTAACACTACGATTGATCAAGAAAACTATATAGTAACGTTTTGGGATACTTGTACGATGCGATCATCTGAGGAATTCGATCTGAGCAAAGTGCGTCCGTTGGAGTACAGAGACACCGATGTTTTCCTGGTctgttttgatatttcatgTCCAAACTCGTTTCAAAACATATCTACTGTTTGGGCGCCTGAACTGAAACATTACATGCCAGGCACTCCAATGATCGTGGTCGGGAACAAAGCAGACCTCCGCTCAACAGGACTACAGCATCTTCTGAGCACTTCAAAGTGTACCGAACTTGCTACAAGACTAGAGACAGTTTACTGGGAAAACAGCGCCATGACAGGCCAAGGTGTTCGAGAAACCATCGACACGGCGTTGAGGAGAGCAGTTCAGAAACGAAAGTCCGAGAGAGGAAAAAAGAGATTCAAGCTTTTTCAAAATCGAAAAACCACACCAGCTAATTATAAACTGGTTGGTAATGACTTAGAGCCTCCATCGCTCCCACATCCAGGTCCTGATCAAGTCATGATTACAATCTTACCATCCACCTACGCCTCAGATATGAGAAAACTCCTAACCAGTGAAGATTACAATTCAGATGTCAATCTATCCTTCTCTACCGGCACCCAATTATACAAGACACATAAAGTAATACTCTGTATGGGCTCCAGCTTTTTTAGGGACCTCCTAATATCAGATGACAACTCAGTTAAGgatccgaaaaaagaacaagaggaATCGCTTTCCCAAGAGTTCACTAAAAACGATATAAACTTTTTGCGACTCGATTTGACGTGGGAACTCCAGGAAGCATTTGCTTACGTTCTGGATTTTGTATACACGTTGGAATTTAAGAACAATCCAGAAACCCATCCAAGAGTTATCAAACATGTTTTAGCACTAGCTAAACTTGCCTCGCTACCAGTGCTGGTCGAGTGCTGTGAAAACGcattgaagaaagaagactaTGCCAATAAAAAACCTTGCGAGAAggcgaaagagaaaaagaacgTGGTAGCGAAGGAGTTGTTCTTTAATAAACCTCTTTTTGCAGATGTGACTTTCGTTGTTGAGGGGACGCGGGTTCTTGGTCACAAGGCTGTGCTGATGGCGAGGTCAGATGTGCTGGCTGCTATGTTGGGTGGAGGATTTAAGGAAAGCAGTACCAATGAGGTCCATATATGCGACGCATCTGCAAGTGCCTTCACCGCTATGCTAGAGTATCTGTACACGGATTCCTTCCCATCATCCCCAGCAGACAGCAGGCAACTTTTGATCTTGAGTGACAGGTTTTGTCTCCCGAGGCTGCGCTCACTCTGTGAGCTCTCCGTCTCGCAAGAATTGGCGACGGAAATGAGGCAAAGAATGCATTTGAGTGACGAGACCTGTGGTGATGTAATCGAGGCATTGCTACTTGCACAGGCTCACAATGCTACTCAGCTCTACAAGTGGTGTGTGTTCACCATCAAGACCAACTTCCCAGATTTCGAGTCCCATGAAGATCTCTCCCTGCTCAAGccaaaagacaaagaagacGTGACACACCAAAGATGGCCGCCACAGTCGTACTTCCAGCAGCTCGAAGCATACAAAAAGAAGATCAACAAAGAATGAATGTTACTAAACAATTATTGTTGAAGCAAGCATTCGAGGGATTGCTAGATGATTTTTGTACAGTCGCTAGCTTCCCCTTCAGGAATTCTTCCGATATTATTAATGTTTTTCCGAAAGATTTGGATGCGTCATGTCGTACATAAATCAATGgttaatgcgcatgcgcagtactATTTGTAGGGAAACACGAGTTTCaacactgcgcatgctccaaCTAGGATTAGTTGTGCGCAGTTATTTGTAGTtgggtcaaccaatcagaatttggaaaatatgaTAATTGAGTGATAACCTAAACTTTTCCAGCTATGCGGCTCACTCTCGACCCGAACCCtctcattcttactgcgcatacTCGATGAAATGTCTTCATACACAGTTAAGTATGACAGGactctggggtcgagagtaATGCCGGCTGGCCTTGCATAACGTGgtagcaagtgtggcttggttggtcaGTGTGCTGCTGCCTGCttagcaagaggtccatagtttgatcctcagtgacctcacacacttgttttaaggagcaagtgtggcttggttggttaatgt

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q91V93	Rho-related BTB domain-containing protein 2 OS=Mus musculus OX=10090 GN=Rhobtb2 PE=2 SV=2
Q9BYZ6	Rho-related BTB domain-containing protein 2 OS=Homo sapiens OX=9606 GN=RHOBTB2 PE=1 SV=2
Q9CTN4	Rho-related BTB domain-containing protein 3 OS=Mus musculus OX=10090 GN=Rhobtb3 PE=2 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002834 (this species only)
Ubiquitin family	E3\|E3 adaptor Cullin RING\|BTB · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00071 all species →	Ras	Ras family	Domain	Interproscan
PF00651 all species →	BTB	BTB/POZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001806 all species →	Family	Small GTPase	Interproscan
IPR011333 all species →	Homologous_superfamily	SKP1/BTB/POZ domain superfamily	Interproscan
IPR000210 all species →	Domain	BTB/POZ domain	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR005225 all species →	Domain	Small GTP-binding protein domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24413 all species →	SPECKLE-TYPE POZ PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003924 all species →	Molecular Function	GTPase activity	Interproscan
GO:0005525 all species →	Molecular Function	GTP binding	Interproscan
GO:0005515 all species →	Molecular Function	protein binding	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K07868	RHOBTB1_2; Rho-related BTB domain-containing protein 1/2	-	GTP-binding proteins	ko04031	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.