Gene detail

Detailed information of ENSOJPP00000036009.1 in Anthopleura xanthogrammica

Genomic Location: not available for this species
NR annotation: XP_031559736.1, DNA replication ATP-dependent helicase/nuclease DNA2-like [Actinia tenebrosa]
Species abbreviation AXANT · all data for this species · gene families

Sequence

CDS

ENSOJPT00000041746

aaaaagaaaagaagttACCATGATGACTTAGAGCATCTATCCGGTTCACTTGATGGCATTACTCCTATGTCATATGTTAATGAAGTCACACCAAGCAAACAACCTTTGTCTTGTTTTAGTGATGATGTTGCTACTAAATCAAATGATAAGATATGTGCATCATATCAACCCTTTCAGCACTTGAGAGGAAAACAGAGTGCAGCAAAGAACATAGTAGATGATAATTCTGATGATGATTTAATACCTCCTACTCCCTCGCCATTAGGGCTGAGCCACAGCTTCATGAAATCTGCAACATCGTCAGAGGATGGTACACCAAAGCGACACACTTTTACTAACTTAAAGTTGACACAAGTTATTCGTAAAAAGGAAGAACAggagaggaaaaaaatgatgattaaATTGCGTTATGGCTTGGTTGATGAGGGTTCGTCTTCTATGACTAATGCTTCAGCATTTGCCAACAAACTGGTAGCAACAGCTGAAGACAGTTTTTCCACGgataacaagaaaagaaatttaaaaatcaatgCGAACAACACTGGTGGCAAGCATAGATTAAATTCTGACAATTGCACGTTAAAAATAATTGGATCTAAGCATTCGAATGTTGGAAACAGAATCTGTGCATCTCCAGAAATATCTGGAGAAAAGACCAAGTCACCtccaacaacatcatcaagtGATGCTACGAGTTTGAGTATAGATGATAAAGCTCGACCTGTTATAGCTCCAAGAAAGTTTGTAGTAAAGAAGAGTAAATCATTCAAGCGGCGGGCATCTAAAGGGAACTCACCTACCAATAAGAGACATCAAGGGGAGCTGCCTATCCGTATTCAGGTAAGTTTATGCAAAAGTCTGCAGGTTCTCTCGGCAATCAAAACTGAAGGTATCATAGGAGATTATTCGTCCATATCCAAGCTGAATAACATAGGACTAGAAAAAGCAAATATTGGCAAACAAACCCATGCTGATGAAATGGAGCATGGTAACATAATAGGTAGTACCCATAATGTGTCAGGTGCCACACCCAGTACCTCTTGTTCATCGCCAATCAAAGGACATGAAAGAATGGGGATGGACAAACAGTTTGGTGTCACACCCATTACCCCTGGAAAGACACCCACTGACGACAGTGACAGACACTTGTTTTTGGACGAACACTTGAGTGTCACACCCATTACCCCTGGAAAGACAACCACTGAAGAGAGTGACAGACACTTGCATTTGGACGAACACTTAAGTCTCAAACCTATCACCCCTGGGAAGACACCCTCTAAGGAATATGACAGACACTTCATCACAGACCTTTCATTACTGACACCCACTAAAAATTCACCAAATGCCTCACGTGATAGTCTTCTTGGGGTTGAGCTTGATTGTTTAATGGATGGAGTTGAGTCGTCACCAACACCGAAAAAGAGCTCATTCATGTTGATTTCTAAAGTACTAATTTCTAATCTTATCCTTAGATCAAACCTTTTCAAAGAATATTCTCCCCACTCCACCCCCTACCAGCGGTTCTTAGTCCTAGAGGTTTACAGACGAGAAGCCAACAGAGACGAAGCTCTGTCCAAATATGGTAGGGTCCTGCCTGAAAAGGTGCTTCGCCTTTTTAACGAGGGAAGATCTGAAGAAAGATACTGTTATTTACGACAAGACTGGGAAATGACTGAAATAGAACCAGGAGACCTTGTGCATGTGACTGGAGATTTTAATGTCACTTCCGGTGTCTGTATCCTTGACAACCAGACAGACCAATACATCGTGGTACACCCCGACACCTTAGTTTCCGGGACAACAGTTGCTGGGGCAACGAGGTGTTTGCGCAGAACTATCCTGAACGAACGTTTCCGTACAGAAGACACAAACGAGGCGATGTTGATCGGAACGTTGCTTCATGATCTGTTTGATAAAGCAATGCAAGCCAAAGAATTTTCCAAAGAAAAGCTCGTCTCCATGGCCAAGGAGATGTTACAGAAACACTCGTACCTCAACTCTTTGTACAGTCTTGGTATGTCTGAAGTGACCGCCCTGGACAAGATAAGTGAGTCCATACCAGCCTTCAGTGATTGGTCCAAACGATATGTTCTGCCTTTCCCACACCCAGATATTAGTCTGATGGACTATAAAGGTTCGTCTGATAAGAATGACAATATTGAACAGCCAAGTGTTTGTATATCAGAACTCAAAGACATCGAGGAGAATGTTTGGTCTCCGAGATTTGGCTTGAAAGGTAAAGTAGACGCTACGGTTGAGGTGAAGATTGATAGACGACCCAGGATAAGAAGGCACAGACCTGACAAAGATAACACAGTAAAGACATCAGTGATACCTTTGGAACTGAAGACTGGGAGACTCTTCTCAAAGCTAGGATCGGTTGATCACCGCGCTCAAGCTATCCTCTACACTCTACTCCTCTCTGATCGTCACCGCCACCCAGTAGACTCTGGTGTTTTATACTACATGAAGTCAGGACACATGGTTGGTGTTCCTGCTCTGGTACACGAGAAAAGAGCTTTAATAATGAGACGAAATGAAGTCGCACGGTACCTTTCCCTCAGCAGAACAACTGGTGGTCTGAAGATGCCAGGAATGTTGAAGGATGTCCACACTTGTAGCCGCTGTTCACAAGCACAGAACTGCACCTTATTCCACAAGTCCATCGAGAATGGTAACCCCGTCACCAGTGGTCTCGGGGAACTCTTTGACAAGCTCACCCAACACTTGTCCCCAGACCACACGCGTTATTTTGCGGACTGGTTCAAACTGGTATGTCTCGAAGGCAAAGAAATTCTGCAATCTGGTAAATCCAGTCAGCATCGTATTTGGAGCATGGAGGGACTGGATCGAGAGACGCTCGGGCAGTGTTTTAGTGGAATGGTGAACACATCACGTGATCTTCAGATGGATAATACTAGGATGTATTTACACTGCTTTGAAAGGATACCTGACCACCCGAACGGGACTCCTCTGGTTGATTTGCTTATTAGTGCTGGAGATAGAGTGGTTGTGAGTGAAGAACGATCCAGTGCTATTGCCATGGCAACAGGATACATACGTGAGGTTAAAGAAAAGAGAGTGATTGTATCTTTGGACCGAGATCTCTCTAAATGCTACAGATCGGCAGATATCCTCGACCAGACACCCATATATCGTCTGGATAAAGATGAAGGTTACAACAGCCTAGTTACACCCTGGTCCAATGTGGCCAAGCTTCTTAATACAGATTCCGAACGAAACGCTCATCTTCGCCGATTGATTATCGATTTAAAACCCCCGGTCTTCGCTCGTAGTCGGCAAACCTCCAGCGGTACGCCGAAGTACCAGGACACCGTTGTTGACTCACTTATGCAAGACCTAAACAAGGACCAGAAACGAGCCATAGCAAAAGTACTATGTGCTGAAGACTATACCTTGATCCTTGGTATGCCAGGAACTGGGAAAACAACTACTATAGCACGACTGGTACAGATACTAGTGGCCAGGGGGAAGAGCGTGCTGTTAACGAGCTATACACACACCGCTGTTGATAATATACTACTTAAGATAAAACAGGCTGGTTTAGATTTCCTTCGCTTGGGTCAAGCACACAAACTGTTACCTGAGATCCAGCCATATTCTGCAGAAGTCGCGGCTGCTGACATCAAGACTGTTAATGAATTAAGAGACTTCTATGCTTCCAAGgCTGTTGTAGCTACTACTTGTCTAGGGGTGAACCACGCCCTGTTTTCGCAGCGTTCATTTGATTATTGTATCGTAGATGAAGCGTCCCAGATAACCCAGCCTGTCTGTCTGGGACCGTTACGTCATGCTGACGTGTTCGTGTTAGTGGGGGATCATTACCAACTCCCCCCTCTAGTACAAAGCCTTGAAGCGAGGGAAGGTGGAATGGATGTCAGCTTATTCAAACGTCTATCAGAACATCATCCACAAGCCGTTGTTTGTCTAGAACACCAGTATCGTATGAACCAAGACATCATGGCATTATCAAACACACTCATCTACGAAGAACGCCTCAAGTGTGGTACTCCAGAGGTGGCCAACGCCCTTCTGAATATCCCACAGTGGAGAGAGCTTGTCTCGTGGTTTTCTGCCAGGACTGGGGATAATTGGCTATTACATGCATTAGACTCCACTCATCCTGTAGTTTTCCTCAACACGGACCAAGTACCTGCATACGAGTCTCGTAATGGACATCTGGTATCGAACGAGACAGAAGGGACCCTCATCCAGCAGCTGACATGCGCACTAAGACTGGGTGGAGTCGATTCGTCATCTGTTGGAATTATTTCTCCCTATCGACAACAACTGAAACTTATAAACCAGAATTCTAAGGCATCCAATGAAGACCTGGAGATCAACACAGTAGATAAGTACCAGGGACGCGATAAACCTTGTATCCTAGTCTCCCTCGTACGAAGCAACGATACGTCATCTGTCGGGGACCTACTGAAGGACTGGCGCCGAGTCAACGTAGCTGTGACTCGAGCCAAAACTAAactgattctgattggttctttGAGCACCCTACGAGCAAGTCTTCTTTTGAACGAATTGATTGATTTGATGGAGAGGAATGACTGGGTTTGTGAGCTCCCGAAAGACGCGCATAAAATGTTCGTGGACTTGGCATCGTTGGAGGAGAAGGACTCGCAAAACAGTAAGGAAAACCGTGAGCAATTGACtttataa

Transcript

ENSOJPT00000041746

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
D3ZG52	DNA replication ATP-dependent helicase/nuclease DNA2 OS=Rattus norvegicus OX=10116 GN=Dna2 PE=3 SV=1
Q8QHA5	DNA replication ATP-dependent helicase/nuclease DNA2 OS=Xenopus laevis OX=8355 GN=dna2 PE=1 SV=1
Q6ZQJ5	DNA replication ATP-dependent helicase/nuclease DNA2 OS=Mus musculus OX=10090 GN=Dna2 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003019 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13086 all species →	AAA_11	AAA domain	Domain	Interproscan
PF13087 all species →	AAA_12	AAA domain	Domain	Interproscan
PF08696 all species →	Dna2	DNA replication factor Dna2	Family	Interproscan
PF21123 all species →	Dna2_Rift	Dna2 Rift barrel domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR041677 all species →	Domain	DNA2/NAM7 helicase, helicase domain	Interproscan
IPR041679 all species →	Domain	DNA2/NAM7 helicase-like, C-terminal	Interproscan
IPR047187 all species →	Domain	Upf1-like, C-terminal helicase domain	Interproscan
IPR014808 all species →	Domain	DNA replication factor Dna2, N-terminal	Interproscan
IPR027417 all species →	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR045055 all species →	Family	DNA2/NAM7-like helicase	Interproscan
IPR026851 all species →	Domain	DNA replication ATP-dependent helicase/nuclease Dna2/JHS1, DEXXQ-box helicase domain	Interproscan
IPR011604 all species →	Homologous_superfamily	PD-(D/E)XK endonuclease-like domain superfamily	Interproscan
IPR048459 all species →	Domain	DNA2, rift barrel domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10887 all species →	DNA2/NAM7 HELICASE FAMILY	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004386 all species →	Molecular Function	helicase activity	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0017108 all species →	Molecular Function	5'-flap endonuclease activity	Interproscan
GO:0071932 all species →	Biological Process	replication fork reversal	Interproscan
GO:0017116 all species →	Molecular Function	single-stranded DNA helicase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K10742	DNA2; DNA replication ATP-dependent helicase/nuclease Dna2	EC:5.6.2.3 EC:3.1.-.-	DNA replication proteins	ko03032	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.