Gene detail

Detailed information of ENSOJPP00000038299.1 in Anthopleura xanthogrammica

Genomic Location: chr4:5913661...5935146
NR annotation: XP_031551508.1, hepatocyte nuclear factor 1-alpha-B-like [Actinia tenebrosa]
Species Anthopleura xanthogrammica · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ENSOJPT00000044399

ATGGCCAGCGAAGTAAGCGAGCTTCAAAAAAACCTGCTCAGTGCCCTATTGGATAGTGGCATAAGTAGAGATGTCCTCATTACAACCATTGACGCGCTTCATGCcaaacgacaagaaaaagaaatcgtTAATACAGTCAACCAAGTGGAACAACAATGCAAGCCAGAACCTGTGAGCCGTGAGATATTGTTGTCAGAAAGCTGCTCTTCTGGCGGAGAAAGCCCCAAGGATTATTCCCCAAGTGAGGAAATCCCCGAGAGCTCACAAAGTCCTGTGGTAAATCGTGGTTCTGTAGTTGACCATTTACTTCGAATGGACCCATGGCAAGCAGCACGTGTGATAAAATCCTACATGCAACAACACAATATCCCACAGAGGGAGACAGTTGAGACAACAGGATTGAATCAAAGTCATCTATCGCAGCACCTGAACAAGGGAACACCAATGAAAAGCCAAAAGAGAGCCATATTATACACCTGgtttgaaaagaaacaaaaggaaaTTGCACAGCAATACAGCAATGCAGGAAAGAGAACGTATTCTGATGATCTTGACAGCCCGTCAAAGAGATCAAGGAGAAACAGATTCAAATGGGGTCCTGCTTCGACCAACTTATTATACCACTCCTATGAACAGCAACGCAATCCCTCAAAAGAAGAAAGAGAGACCTTGGTAATTCAGTGTAATAAAGCGGAGTGTGAACAAAGGGGAGTTCCCTACAGCAACGTGGAAGGATTGGGACCTAATCTAGTCACAGAAAGCAGAGTTTACAACTGGTTTGCGAACCGACGAAAAGAGGAAACATTTCGAATGAAGCTTGCCATCGAAGCCGCCAGCTCAGGCTTCCCAGAATCGACTGgtCAAAATCTCAGTTCACCAGTCACTACACAAATGTCAGTTATCTCGTCCAAAAGCACCATCGTATCAAGCCCTTCGTCACTAGGTCCACCGAACGTCCGTTCACCTTTAACATCACCTGTGCAGTCGTGTTCACCATTCCAAGCCACAGAGAATCAGACCAtaactactgctgctactggtAGTGGTGGTCGAGGACAGACACTGCCCAGCGTCGGGACACTGATGCAAACGTCAAATGTTGATAGCAACACGCTGGCTGCTCAAAGAGTGATGCAAGGGATGCCTTCAcagGTCCCAGAACACTCACCGATGTTAccaaacaacaacaccacGCCTAGTGGTCCTCAACATCTCTCCATGAGCATTACTGCTGTCAGCACCAACCAGATAGTATCATGTGCAAGCCAAGCTATGCAAGCAATGGCAGGCCGTCATATATCAATGCATCCTATCCCAATCACCACATTCCCTAACACTCCTTCCTCCATGGTGTCTACCGCAGTTTCAAACTTCTTCCATCAAGGTATGTTAGCAACGCCCAACTGTGGTGTCCCTAGTGTTACGGTGAGCCATACTGCGCAGGCGCAGACTCCCATAGTAACGGTGCAACACCTCCCTAACAACGCAAGGGGTGATGAGAGACGTGTCGTTCATTATACTCATCGTAATGTCACGAATATCCAAAGTCCAGTCATTCAAACTGCGAGAAGGCAGATCATTCAGGATCCCTCGCATAATTACGGTACCAAGCAGATCCTCAAAGGCTGTACTGTAAGTCATAATGACGAGGCTCCTGGGGTCAATGGAGAACACGTAATTCATCAAGTGGTTCAAGCCATTTCTGACGACCAACTCGACAGTTCTGTCCCCGATGCTTTAACGGTAGCAGAAGATGTAGAAAAGCATCCCAAATCTATGGATGTCATTGACGGGCTGACAGTGAAAATGGAGGTCAAcggagaaaatgttgaagaagTGGATTCCATCGGAGAAACAGTTACGATCGAGACTACAGAGTCTAGTGATAACAGTCCTGTTAAAGACTCGCGAAAAGAGAGCACGCGACACGAGATGGGATTCTCGAATAACGAAGCCGTGGTTGTCAGGCCAAATGTTGGGAAGATGATTGCTTTTGATCATATAACTCTCTGGGTTGGAAATGCGAAACAGGCTGCGTCTTTCTACTGCACACGCATGGGTTTTGAGCCAATGGCATACAAGGGATTAGAGACTGGTTCAAGAGAGGAAGTTGCACATGCCGTCAGCCAAGATAAGATTGTCTTTGTTCTGAAGTCTGCTCTGGTTCCCAACCATGAACTCACTGAAGTCATGGGAAAGCACCTTACTCTTCATGGTGATGGTGTGAAAGATGTAGCCTTTGAAGTGGAAGATTGTATTGCTCTGTACAAGGAATCTGTAAAACGAGGTGCAAAGTCAGTAAAAGAGCCTTGGGAGGAAAGTGATGAAAATGGCACAGTTACCTTTGCAACTGTTCAGACAGTAAGTATAAAATGGATTGCACTTCAATTTGGTGGGGTTAGCAGTGGAATAGTAATGGACAgGCCAAAAAGCAAATTGAATTTTATTGACCATGTTGTTGGTAACCAGCCTGATAGCCAAATGGTTCCCACTGCTGATTGgtaTGAAAAAACTTTGCAGTTTCACAGGTTTTGGTCTGTTGATGATAAACAGGTACACACAGAATACAGTGCACTGCGGTCTATCGTAGTCACCAACTATGAAGAAACCATAAAGTTGCCCATCAATGAACCTGCGcctggaaaaagaaagagtcaAATCCAGGAATATATAGACTATTATGGAAGTGCAGGAGTACAGCATATTGCATTGAACACATCAGACATTATCACAACGGTGACCAATTTAAAGGAACGTGGGATGGTTTTTTTGTCCATCCCTGATGCATACTATGATAACCTGAGAGAAAGACTCAAGACAGCAAACATAACAGTCAAACAGTCCTTGGATGTTATTCAGCAACTTAACATCCTGGTCGACTTTGATGAGCATGGCTACCTGCTACAGATCTTTACAAAACCAGTAGAAGACAGACCAACTTTGTTTCTTGAAGTGATTGAAAGACACAACCATACAGGTTTTGGAGTCGGTAATTTCAAAGCTCTTTTTCAATCCATTGAATCTGACCAAAGGCAACGTGGGAATTAA

Transcript

ENSOJPT00000044399

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q5BKL0	4-hydroxyphenylpyruvate dioxygenase OS=Xenopus tropicalis OX=8364 GN=hpd PE=2 SV=1
Q6TGZ5	4-hydroxyphenylpyruvate dioxygenase OS=Danio rerio OX=7955 GN=hpd PE=2 SV=1
P32754	4-hydroxyphenylpyruvate dioxygenase OS=Homo sapiens OX=9606 GN=HPD PE=1 SV=3

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004457 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04814 all species →	HNF-1_N	Hepatocyte nuclear factor 1 (HNF-1), N terminus	Family	Interproscan
PF00903 all species →	Glyoxalase	Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006899 all species →	Domain	Hepatocyte nuclear factor 1, N-terminal	Interproscan
IPR037523 all species →	Domain	Vicinal oxygen chelate (VOC) domain	Interproscan
IPR023219 all species →	Homologous_superfamily	Hepatocyte nuclear factor 1, N-terminal domain superfamily	Interproscan
IPR010982 all species →	Homologous_superfamily	Lambda repressor-like, DNA-binding domain superfamily	Interproscan
IPR009057 all species →	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR041736 all species →	Domain	4-hydroxyphenylpyruvate dioxygenase, N-terminal	Interproscan
IPR001356 all species →	Domain	Homeobox domain	Interproscan
IPR044869 all species →	Domain	HNF-1, POU-specific (POUs) atypical domain	Interproscan
IPR041735 all species →	Domain	4-hydroxyphenylpyruvate dioxygenase, C-terminal	Interproscan
IPR044866 all species →	Domain	HNF-1, dimerization domain	Interproscan
IPR029068 all species →	Homologous_superfamily	Glyoxalase/Bleomycin resistance protein/Dihydroxybiphenyl dioxygenase	Interproscan
IPR005956 all species →	Family	4-hydroxyphenylpyruvate dioxygenase	Interproscan
IPR004360 all species →	Domain	Glyoxalase/fosfomycin resistance/dioxygenase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11959 all species →	4-HYDROXYPHENYLPYRUVATE DIOXYGENASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005634 all species →	Cellular Component	nucleus	Interproscan
GO:0045893 all species →	Biological Process	positive regulation of DNA-templated transcription	Interproscan
GO:0003677 all species →	Molecular Function	DNA binding	Interproscan
GO:0003868 all species →	Molecular Function	4-hydroxyphenylpyruvate dioxygenase activity	Interproscan
GO:0009072 all species →	Biological Process	aromatic amino acid metabolic process	Interproscan
GO:0016701 all species →	Molecular Function	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen	Interproscan
GO:0006572 all species →	Biological Process	tyrosine catabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSOJPP00000038299.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.