Gene detail

Detailed information of ENSOJPP00000038558.1 in Anthopleura xanthogrammica

Genomic Location: not available for this species
NR annotation: XP_031553880.1, xylose isomerase-like isoform X1 [Actinia tenebrosa]
Species Anthopleura xanthogrammica · all data for this species · gene families

Sequence

CDS

Transcript

ENSOJPT00000044740

AACGTGACATAAGATACTATGGATATAATTTGATTTGTATAAAGTatcaaaatatctaaataaCGGAGAATAATTCGATAAACTTACGTTAAACTCCAAGCCATAAATCACAGGAGAATCGTCCtccatcttgaattgctttgtacaTCCGCTGGTTGGTCTGCAGGCGCATGTATTAGCGAGGAACGCCTGTGCAAATCCGTGTTTTGGTATCGAATATCCGTACCTGCCACTGCAGGCTTTGTTTGAATCTTTTATTCTccccttttttaattttctactCTGTCATTTCATTTACTATGTCTTCATTTGCACCGTCCACCAAGAGAGCAAAGATTGCAAGCAGTGAAGTCTCGGAGGCGGATTATTTCAAAGGTATACCTAAAATTGAGTTCAAACCAGATGCTGGTGCTACGGATGTGTTGTGCTACAAGCATTACAATGCCAAAGAAGTTATCAATGGGAAGACCATGGAAGAATGGTTGAGGTTTTCAGTCTGTTATTGGCACACATTTAGAGGAACAGGTGCAGATCCATTTGGTTTCCCTACTCTAACTCGTCCATGGGAGGATGGAACCAACAGCATGGAAAATGCTAAAGGGAGGCTGAGAGTAGCTTTTGAATTCTTCAGTAAACTTGGTGTTCCATACTGGACATTTCATGACAGGGACATTGCTCCTGAAGGTGAAACATTGGCAGAAACAAATGCCAATTTAGATGAAATCACAGACCTTGCATTAGAACTGCAGAAAAAAACAGGAGTCAAGTTGCTATGGGCAACTTGTAACTTATTTGCTCACACAAGGTACATGAATGGAGCTGCCACAAACCCAGATGCTCATGTCTTTGCTTATGCTGCAGCACAAGTGAAAAAAGGACTTGAAATTGCTAAGAAATTAGGCGCTGAAAACTTTGTGTTCTGGGGAGGAAGAGAAGGATATCACACAATGCTCAACACAGATGTCAAACGTGAACTGGATCACATGGCCAACTTTTTTCACATGGTGATAGCTTACAAGAAGAAGATTGGTTTTACTGGACAACTGCTGATTGAACCAAAACCCAAAGAACCAACAAAGCACCAGTACGATTATGATGCCCAAACTGTCATTGGGTTTCTCAAGACTTACGGCTTGGACAAAGATTTCAAGTTGAACATCGAACCTAACCACACAACATTAGCTGGTCACAGCTATGAACATGATGTAGTCGTGGCTTCCAAATATGGTTTGCTTGGATCTATTGATTCCAATACTGGATCGCCTGACCTTGGATGGGACACTGACCAGTTTCCAATGGACGTCAAGAACTGTACATTCGTCATGAAGGCTGTAATCGAACAAGATGGACTGGCTCCTGGTGGATTGAATTTTGACTGTAAAGTACGACGAGAATCAACTGATGTTCAAGACATGTTTATTGCTCACATTGGGGCAATGGATTCATTTGCTCGAGGTCTTAAGTCAGCCGTGAAGTTGATTGAAGAAGGAAAACTGAGCTCACTTGTTAAGGAACGTTATTCGTCGTTTGATGACGGTATTGGAGTCAAGATTGAGAAAGGATTGACATCTCTAGAAGAGCTGGAGaGTTACATCATGGAAAACGGAGACCCTGAACTGATCTcaggaaaacaagaaaaatgtgAAGCCATCTTGAACTACTACGTTTAAAACTGATATCTGCATGAGGGGATCGCATCAACGGTAGATAAAACCATTTCCTATTATTCTGCGTAAACATGCATGACTGTTAGAGACATAGGGTACTGATTTTAGTTTGTAATTCCTGCCATTCGATCAATGACAGGGGATAAATCATCCATCTCCGTAGCATATCTAATatcttttaaataaatatcctATTGCGACCGAGTGTCTCAATAGTACATCCCGTCaaatgttgttgatgttgaaaTGAACAACCCGTACAATATCCGGTCCTTAGTGTTTGTACATGTCAGACGACACTGTTGATTTTTACAAGATGCCATCAGTATTTCTGCTGATGTTTAAAGGAAACTCTtgatttttcataaatatatactgtTCATTCACACGTCAAATGTTCTTGGGTATGATGTCTTAACATCCCTTGTCAGTTTGCTAGGGTAAAATTTAATCAATCTCCAGCTGATAAGTCTGTGGGCGTTGTTGATTTTGCGGTGGTAAGAAATCTCCCCGGAAAGCCGGtaggaaaaccctcgaagcctGAATGTTGTCACTTCGAGCCATAGTAGTAGTTGCAGTAATTTGCCATTCATTTTATTCACTTGAGACGTAACTGGTTGCTGTTGTCATGTGACGGTGATTTTATAGTTGAGGTAAAGGTTGAGTAACTGCTGTTATGTCTAGTTAATCCAAGTGAACGTTTTCAATTTGCCTTCGATCACGTGGACGCGTTACTATGGTGATAGAAGGATCATCTCATTTCCAGTACATGTATTTGTGGGTTTATTCTTCTAATCATGAGAATCTTTTTGAATTCAGCTTTCAAAGTGCTGTTTGTGGCATTATATATGAAGGGATTGACAGCACTTGATACTGCAGCCATGTACGTGTAGAATACATACACTTGTCGTGGAATAGTAATAAAAACTGATAGAAAATCAATCAACGGCATTTGCAGATAACAGAGTAGAAAGACGAGGATAATAGCAAACAGTCCCTTAG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q40082	Xylose isomerase OS=Hordeum vulgare OX=4513 GN=XYLA PE=1 SV=1
Q9FKK7	Xylose isomerase OS=Arabidopsis thaliana OX=3702 GN=XYLA PE=2 SV=2
Q7UVG2	Xylose isomerase OS=Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1) OX=243090 GN=xylA PE=3 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0010532 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01261 all species →	AP_endonuc_2	Xylose isomerase-like TIM barrel	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001998 all species →	Family	Xylose isomerase	Interproscan
IPR013452 all species →	Family	Xylose isomerase, bacterial-type	Interproscan
IPR036237 all species →	Homologous_superfamily	Xylose isomerase-like superfamily	Interproscan
IPR013022 all species →	Domain	Xylose isomerase-like, TIM barrel domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR48320 all species →	-	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan
GO:0009045 all species →	Molecular Function	xylose isomerase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01805	xylA; xylose isomerase	EC:5.3.1.5	Fructose and mannose metabolism	ko00051	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.