Gene detail

Detailed information of ENSOJPP00000038750.1 in Anthopleura xanthogrammica

Genomic Location: :...
NR annotation: XP_031574844.1, N-chimaerin-like [Actinia tenebrosa]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSOJPT00000044940

TTTTtcctaaaatattttggatAAGAACTTCGAAATTCTGTCTTTACTTGGCTTATCTTTTTAGGGTTTGTGGTGTATACCAGCAAGCTGGTTGGCACCTTGTTCTTTACTAAATATCTTGTTAATTCAAACgtaaatgacatcatttaTTCATAATCAGATCTTTTTTACACGCCAACACAAACTCAGCACTGCTTGGTTATTTGAACATTACCGTCTGTTTGAActaacttataaaaaaatgccgttttgaacttcaacaatTGTTGTGAGCTTTGCTTGCCTTTTCGACCGTCATAATGGCGATGCTGTTCGTGAAATCCTGGTTTAATGTGCTGGACAGGAGATTCAGTGCTGGCAAGAGGCCCAGCTTTAAACCGGCTGCTTACGCTAAAGACCATAACTTCAAGataaaTACATATAAGGGATTTCATTGGTGTGATTTCTGCAGAAATTTCTTGTGGGGTCTGACTCAACAGGGATATAAATGTCAAGATTGCGGAATGAATGCCCATAAACAATGCTATAAATTAGCAAAAAGGGACTGTATACCTGACAAGAAATACGTTCGAAGAGTATTTGGAGAAGATCTCACTACAGTTGTTAAGTTACATGATACTAAAAGGCCGTTTGTTGTGGATATATGTGTACGAGAAGTTGAAAAAAGAGGAATAGACAGTGAGGGTATCTACAGGGTTTCTGGGTTCGCTGATGATATTGAAGTTCTAAAAAACTCGTTTGATAAAGaTGGCGATGCAGCTAATGTTGGTCAATACGAAGACATAAACACGGTTACAGGGGTGCTAAAACTCTTTCTTCGCCAACTTCCTCTCCCTCTTATTACATTCGAGACGTATGGTCAGTTTATAGAAGCGGCAAAAATTCAAGACAAGTTTTGTCGAATTGAAGCACTTGCCAAAGCTTTGACTGATCTACCTCAACCACATTTTGAGACTATTAAATTTCTAATGGGCCATTTATACAGGGTATCTCAGCACAAGAGTCAAAATATGATGTCAGAAGAGAACCTCTCCATCGTGTTCGGTCCCACCATGATGAGGTCACCTGAAGGCGAGACTCTCAACACTTTGGTCGacttgaaatttcaaagacTTGCTATAGAACTGCTAATATCTCATCAGGATGTCTTGTTTGATAGCCAGTGAGATTATAGAACACCAATAGCAATGTAAGATGTACATTATAGTTATGGGGTATGCTTTTCTACACTGTCAAGAATGTGTTATGTTGGCCAAGAGCCCATTGGTTTGTTTAGCCAGCACTTTGCAAGAACCCAGTTActagctgataaaagtctttgaatctcattatctgcggctaatggtggtcaaacactggccaccatgtgctgtcaactgatgaacattcttcacgagacaggaaatgatgtGAATCCACTTAAGTCACTCGACACCAAAAGGCAAGCAAAACTTTGTTTTCAATTATCCTACTAAAGCGTGAACCTCACTGCTTTTATGGAGAACGCGCTCTACAGGGATTTGTACCTATATTCTATAGAGACTTTTCGTCCATGAGGTTTTGATTGAAGGAATTGCTTATGATGAAACAATTTTAAGCACatttttatggattttttttgtctttggaAGAAACAAAGCATATTTTATTTGAAGCAAATATTGGATAACTGATTAGACCAGATAGCTAATAGCAAATTTCATATGTGGAAAAACTAGGTCAGGCTTTGTTTAAGCTGAACTTAACTTTTACTCCAAATTATGATCATTATGATTGATGAGACGctagaaaatattaatatgaGAGATACTATTATATGGACTATTACTATTTTGAAACAGTATACACTTTGGCTtgtgcgtaatgttttcccatttcagaccacgcaTCTTTGACTTTAATAGGAATACTAGAcaccttgcagcacgtcggaatgcagctcaatttttaagacaaaacaataggttccaattctcaggagattaaaattcttttgttttgtcctccaaattgagctgctttgacgtcatgtgcaaggggtctattaatgTGTCCTCTtatgcgcaaccattaaacaaagtaaTAATACTATAAGGAATGGCACGTGgcctgaaatggaaaaacatgcCCAAAATAAACAGATGTATTTCATGGAACTCATTTCT

Protein

Uniprot

Uniprot term	Description
P30337	N-chimaerin OS=Rattus norvegicus OX=10116 GN=Chn1 PE=1 SV=2
Q91V57	N-chimaerin OS=Mus musculus OX=10090 GN=Chn1 PE=1 SV=2
Q17QN0	N-chimaerin OS=Bos taurus OX=9913 GN=CHN1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00620	RhoGAP	RhoGAP domain	Domain	Interproscan
PF00130	C1_1	Phorbol esters/diacylglycerol binding domain (C1 domain)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR020454	Domain	Diacylglycerol/phorbol-ester binding	Interproscan
IPR008936	Homologous_superfamily	Rho GTPase activation protein	Interproscan
IPR000198	Domain	Rho GTPase-activating protein domain	Interproscan
IPR002219	Domain	Protein kinase C-like, phorbol ester/diacylglycerol-binding domain	Interproscan
IPR051854	Family	Rho-type GTPase-activating protein	Interproscan
IPR046349	Homologous_superfamily	C1-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46075	CHIMERIN FAMILY MEMBER	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0007165	Biological Process	signal transduction	Interproscan
GO:0005096	Molecular Function	GTPase activator activity	Interproscan
GO:0043087	Biological Process	regulation of GTPase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K20630	CHN1_2, ARHGAP2_3; chimaerin	-	Membrane trafficking	ko04131	deepkoala