Gene detail

Detailed information of ENSPTBP00000003151.1 in Oculina arbuscula

Genomic Location: not available for this species
NR annotation: XP_020612630.1, V-type proton ATPase subunit C 1-B-like [Orbicella faveolata]
Species abbreviation OARBU · all data for this species · gene families

Sequence

CDS

Transcript

ENSPTBT00000003151

GCAAAATAGTGATAGATCTGTTCTAGCTAGCGAAGGTTCAGAAGATTCGCGTGTAAAAATAGCGTTCATGTTAGCTTTTATTGCGTAGATTTTTGACTAGAATAGTTTAAAGAATGGCAGAGTATTGGCTGATCTCAGCTCCAGGTGATAAAACGCCCCAGCAGACGTACACAAACCTAAAAGGCAAGATGACTGGACTATCTCCTGTGTTCCAACTTCAGCTTCCCGAACTGAAGGTGGGAACCTTGGATACACTTGTTGGATTATCTGATGATCTAGGCAAACTGGATGGCTTTGTTGAAAGTGTAACACGCAAGTTAGCACACTACATGGTTGACGTACTGGAAGAGCATCAGGACAGAGTGAGGGAAAATCTGCTTGCAAATGGGCAGGACTTGTCAAACTTTGTAACCAAGTTTCAGTGGGATTCTGCTAAATACCCCATTAAACAATCACTGAGGAACTTGACAGAAATCATCAGCAAGCAAGTGACTCAGATTGAACATGACTTGAAGACCAAGTCATCTGCTTATAACACAATCAGGGGAACGCTGGCCTCCTTGGAGAGAAAAGCTACGGGAAGCCTTCTCACAAGGAATTTAGGTGACTTGGTGAAAAAGGAACAGTTTGTTTTAGACTCTGAATACCTCACCACGCAGTTAGTGGTTGTTCCCAGGGCCCTGTACAGTGAATGGGAGAAAGTGTACTGGAAACTAACAGATATGGTTGTTCCAGAATCCTCAAGTTTGGTTTATGAAGACAATGAACATGGCTTGTTTACTGTAACATTATTCAAGAAAGTGGTGGAAGAGTTCAAACTGCATGCAAGAGAACAGAAgtttttagtGCGTGACTTTGTGTATGATGAACAGGCTTTGGAAGCAGGAAAAAACGAAATCACAAAACTGGAATCAGACAAGAAAAAACAATTCGGTCCCCTCGTAAGATGGCTCAGAGTGAACTTTAGTGACTCATTCATTGCTTGGATTCACGTTAAGGCTCTTCGTGTGTTTGTGGAGTCAGTATTAAGATATGGTCTACCAGTGAACTTCCAAGCTATGCTCCTACAGCCTTCCAAGAAAACACATAAGAAGATAAAGGACATGCTGAACTCGTGTTATCAGCATCTTGACAACCAAGGTTTCAGTTCCACCATGTACGACACACATAATCTGGACATCCCAGGACTTAGCTTGTCGCAACAAGAATATTATCCATACGTCTATTATCAGATTAAATTAGATCTAATGGAGCGGTAGAGCAAGAAAGGCGAATAAAAAGTGacttttaattattaattgaTAAAGAAAAGGCAACTTTCGTAAAGAATGTTGTAGTTCTTAAATGAATGAATGGCAAACTGAGGCGGCTAGACAGTTTGACTCGTGGGGAATGGTTTTCAAATAATTTTGCTGTTTAACAAGAATCCAGAAGTCATCTATGCTGACTAATCTACCCGCAGaattatatataaaatatgATCATAAATGTAAATATTTGGGCAAGATTGTTTTCTTATAGGCCGCTTACGAAGAATGGAATGATTTACCTTGTGTACATTTTACAATGAGTATTCGACATAACAAAATTCGTCCAGTTAACCTCTGTCGTTTTCGTCCGAAAGAAAATGGTGGCGAGTGTACCCTGTGGTCCTGACTCGTAACCAgtcatacagtaaaaacccgcgtataagaacaagtggattaagaacacccaggcctgattttaggaaataaagtaccatttatataagaacacattcagcctgataaatgaaagttgttcttatatggaaaaatagcaaagatcaacactacttttcattgcacacgtaatagttccaccccaattacagtacagtattgccttgatttatcaattttattaaaattaaaatacaattgtgtgcatatatattgatttcatctattggtagcctagtatgttccttattttaagaaaccttttttaagaacacttacaggctgattttgcagattatatccctttatataagaaccaaatcagcctgaaccgccaaaattggtgttcttatacgcgggtttttactgtatcgaAAATTTTTAGACACGGCTATGAGGGATTACTGAGAACAGTCCGCTTTAATTTCCTAATGATCGACCTCACACTTCTTCCAACAGTATTAAT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9U5N1	V-type proton ATPase subunit C OS=Manduca sexta OX=7130 PE=2 SV=1
Q5XIY6	V-type proton ATPase subunit C 1-B OS=Danio rerio OX=7955 GN=atp6v1c1b PE=2 SV=1
Q7T385	V-type proton ATPase subunit C 1-A OS=Danio rerio OX=7955 GN=atp6v1c1a PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005298 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03223 all species →	V-ATPase_C	V-ATPase subunit C	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036132 all species →	Homologous_superfamily	Vacuolar ATP synthase subunit C superfamily	Interproscan
IPR004907 all species →	Family	ATPase, V1 complex, subunit C	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10137 all species →	V-TYPE PROTON ATPASE SUBUNIT C	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0015078 all species →	Molecular Function	proton transmembrane transporter activity	Interproscan
GO:0033180 all species →	Cellular Component	proton-transporting V-type ATPase, V1 domain	Interproscan
GO:1902600 all species →	Biological Process	proton transmembrane transport	Interproscan
GO:0000221 all species →	Cellular Component	vacuolar proton-transporting V-type ATPase, V1 domain	Interproscan
GO:0005765 all species →	Cellular Component	lysosomal membrane	Interproscan
GO:0046961 all species →	Molecular Function	proton-transporting ATPase activity, rotational mechanism	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02148	ATPeV1C, ATP6C; V-type H+-transporting ATPase subunit C	-	Rheumatoid arthritis	ko05323	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.