Gene detail

Detailed information of ENSPTBP00000009141.1 in Oculina arbuscula

Genomic Location: :...
NR annotation: XP_020630591.1, papilin-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSPTBT00000009443

TGTCCCCTCACAAAGCAGTAATTTGGATCCTGGGAAGTGTTCTTTTCAGACGTGATCTGACGGCCTAATAGAGAAACGCTGTGCTGACGTAGCCAAACAGGAAGTGTCCAAATCGCGGAAAAACCCCATTCACGGGAAAGTCCCGTCTTCTCTGTGACAGACTAAACTACTTTATTGGCATATTTTACTCCCGGCCTCGATATTTTGTTGCTGTCGACAAAGCGACACCTCAGGTTTTATAGCTTGCAAAAAATCTTCCACAATTGTAATTCTCGTGAGGAAGAAGAGACGAAGCGACAATGGCGGAAACACGCGAAGAAATTGCTAAGCCGTGTAAAACTGAGACTGATACACAAGAAAACCTGTCGTATTGCCCACATTACGAGCGAGACACTTGCCTGATTCATTTCACGTGCTGTGATGAAGAGGATTGGTACCCCTGCCATAAATGCCACAACGAGACCCTGCAGGAGAAACCACAGGAGGATAACAAACCATCAAAGGATCATTCAAAAGATTTTTTCACGACGAGTAATATCTCAGAGGAAAGGGAATGTTTAGAGGTGGGAGGTTCCAGCCAAGCTGAAAGTAGCAGTGAACCTGAAGGGCTACAAGAAGTTCCATCAACCAGTGGTGAAGTTGAAGAACCTATGGAAGTTGCTGGTAGAGCATTAAATGAGCCAAGCAGTAATGAAGAGGCTAACAAAAATGCAGACAGTGTTTTCGAGAGAGCTAAAGAAAATGGTTCACTACTCGCAGTGGATGCAAGTCCACCTTCTCCTCCAGGAAATACGAAGACGCACCCAGTGGCTACAGCACTGGATGGATCTCGGCTGAGGTGTACAACGTGTAGAGGAGAACAAGGGTTTTCCCAGAACTGTGAGTCGTGTGCCAAGTCTTTTGCCAGCTATTTCTGTGGCGAATGCAAACTTCTTATTGAAAAGAAAGTTGATCCTTATCACTGCAACGACTGCGGTATATGCAGgggAGACAAGGCAAATAATTTCCATTGTGACGTCTGTAATGTTTGCATGGCACTCTCTCTTAAGGAAAATCATACATGTTTTGCTGACCGAGGACATGATCCGTGTGCAATATGCTTGGAGGAGGTGTTTTCAGGTGCCGTTATTTTTCCGTGTTTCCACATGGTTCATAAAGACTGTGCTGAAAACCTTGTTCTGTCTGGAAGtcaTATGTGCCCCATGTGCCGTAATGTGATCTTCCAGGATGACGAAGATGCAGCAACTTCAGAAGAGACAACTCAGCAGATGCTTCCAGCAGGTCACAGTGTTTCCAGATACTGCGGTCAGATTGGGCAAAAAATATCCAGTATGCCAAGCTGGATTGGCAATTGGTGCAAACGTACCTTCACGAGAAATGGATCGTCAGGAAGAGAAATTGAAATGAGGAATGTATCAACGGCAGTATAATCGGAAATAACTCTGCTTTTAACATCACCCAAATGGTCATTTTTAGATGATGATCGCTACACTAAAGATTTTAGTACTTAAACTGAAAGAGAGGAAGTTTGGTCTGAGGGACAATACAGATCGCTTCagtacaattattttaaaaaagtgtaACAATGGTTTGTCTCAAGGTATAAATTACTGAAAACAATCGTATCTTGTACGATTTTGCTCTCAGGACATAAAAATGCAATGTTCGTTCTAGTTAACGAGTTAGAATTTGTTGGAGGCACCATGATGTTTTTGTATGTTTTAATGCATTAAAAGATGGTGTTTTGCAACACTGACAATGGTCAGAACGTCAAGTTATCTGGTCAAGATGTTTTAAACGCACCTTTAAACAAACGTTTTGTCTTCTTGTTGATTCGATCGCTATCTAAATAAGGCCTTGACTCCCACATCTACCTAGGTTTTGCCTAGGAGCCGCCTTCAGCAAAGGGTATGAGATTTAAATTTATTAGTGTGTTGTGAcaattttcataaaaaataaattacgaatcactttaaatttaaaaggaaaACAAGCTTTGACGAAACTGCCAGAATATTGCCTTCTTCCAAGGCGC

Protein

Gene family

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity RING\|RING

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00097	zf-C3HC4	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037275	Homologous_superfamily	Zinc finger, CTCHY-type superfamily	Interproscan
IPR037274	Homologous_superfamily	Zinc finger, CHY-type superfamily	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR017921	Domain	Zinc finger, CTCHY-type	Interproscan
IPR018957	Domain	Zinc finger, C3HC4 RING-type	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21319	RING FINGER AND CHY ZINC FINGER DOMAIN-CONTAINING PROTEIN 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0046872	Molecular Function	metal ion binding	Interproscan