Gene detail

Detailed information of ENSPTBP00000016741.1 in Oculina arbuscula

Genomic Location: not available for this species
NR annotation: CAH3148236.1, unnamed protein product, partial [Pocillopora meandrina]
Species Oculina arbuscula · all data for this species · gene families

Sequence

CDS

ENSPTBT00000017496

atgacatcaaaatgtggtaagaacaaaaaagtggcccacgagctgctaggcgaTGAAGAAAGTAAAAAGTCCAAAgtaacaaaacacaaaagaGCTACCACAGGGGAGAAGCTGTACcagtgcaaacagtgtggcaagtgctttgGAGACGCCGGAAATTTGAAGAAACATGACATAGTCCACACAGATGAAAGGCCTTTTCAATGTGAacaatgtggcaagtgttttagaaCTGCATCATATCTCCGAACGCACAAAAGACTCCACACTGGTGAGAAGCCTTATgagtgcaaacagtgtggcaagttcTTTAACCAAGCATCAAACTTGAGGACTCATGAACAAGTCCACGCAGATGAAAAGGCctatgaatgcaaacagtgtgggaAACGTTTTAATCAAGCACAAGGTTTGAAAGATCATGAAGGAATTCATACTGGGGAAAAGCCTTTTAAGTGCACACAATGTAGCAAGTGTTTTAGACGTAAAACAGATTTAAACAAGCATGAGAGACTCCACACTGGCGAGAAACCATtcgaatgcaaacagtgtggcaagtgttttagccaaGCAGTACATTTGCGAACTCATCAAAGAGTCCACACAGGGGAaaagccttatgaatgcaaacagtgtggcaagtgttttagagATTCATCACATTTGCAAAATCATAAAAGGGTCCACACAGGTGAAAAaccttatgaatgcaaacaatgtggcaagtgtttcagaCATAGTATAAGTTTACAAACTCATAAAAGAGTccacacaggtgaaaagccttatgagtgcaaacagtgtggcaagtgttttacaAAAAGTGGACATTTGCAAACTCATGAAAGAGTTCACTCAGGTGCAAAGCCTTTTaagtgcaaacagtgtggcaagtgttttaaccAAACATCACATTTGAGAGTTCATGAAAGAATTCACACTGGTAAGAAGCCTTATgagtgcaaacagtgtggcaagtgttttgcAGAAGCAGGAAATTTGGCAAGACATAAAAGAATCCACACTGGTGAGAAACCTTacgaatgcaaacagtgtggcaagtgttttaaccAAGCCGGAGATTTACGAAAACATGAAAGAGTTCATACTGGTGAGAAGCCtcatgaatgcaaacagtgtggaaAGTGTTTTAGGGAAGTAGGAGATTTGCGAAAACACGAAGGAATCCACACAGGTGTGAAGCCTCAtaaatgcaaacagtgtggcaagtgctttagACTTAGAACAGATTTAAGGATTCATGAAAGAGTTCATACTGGTGAgaagccttatgaatgcaaacaCTTTGTCATCATCAAGAGAGACGCCATTTCAGCCTTCCACGACACTTTGAATTCCATCGACCCCAAGATCTCTTTTACCATCGAAACTGAAAGCAATGGCCAAATCGCCTTCCTGGACACCCTCGTCAAcagaaaaaatggcaaaatcaCTATCGAAGTATACAGAAAACCTACACACACAGACAGGTATTTAGACTTTAACTCGCATCATGAGAAGAATCACAAAATCAGCACAGATTCCACTCTTCTGAACCGCGCGTGTAACCTCCCAAGCACCGCAGACGCAAAATCGAATGAAGTCAAACATATCTCTGATGCCTTAAAAGCGAATGGCTACCCCCAATCAATTATCTCTAACATCCTAAAGAAAAAACGCACTACAGAAACAATTCCCTCTCAGGAGGAACTTGTTGGTTTGACACGTGTTAGAATACACACAAGAAATACGCCCCATAAATGCAAGCAATGTGGCAAATGTTTCAACCATTCATCAAGTTTAAAGTCTCATGAAAGACTTCACACAGGGGAAAAGCCTTATGTATGCATACAGTGTGGCAAGTCCTTTAGACAAGCAGGACATTTAAGGTCTCATGAAAGAATTCATTCTGGTGAgaagccttatgaatgcaaacagtgtggcaagtgttttggTTATGCCGGAGTTTTGAAAACTCATGAAAGAGTccacacaggtgaaaagccttatgagtgcaaacagtgtggcaagtgctttatCAAATCTGGAAATTTGAGGTCTCACGAAAAAGTTCATTCTGGTGAGAAACTATATGAATGTCAACAGTGTGGTAAGTGTTTCACCTTTGCCGGAAGTTTAAAGATTCATGAAAGAGTTCATACTGGTGAgaagccttatgaatgcaaacagtgtggcaaatgCTTCAGACAATCAGCAAATTTAAGCGCTCATGAAAGAATTCATTCACGAATaaagccttatgaatgcaaacaatgtggcaagtgttttagagAAGCAGGAAAATTGAGGATTCATGAAAGGGTTCATACTGGCGAGAAGCCTTACGAATGCAAacaatgtggcaagtgttttcgCCAAGCAGTACATTTGAGGACTCATGAAAGGGTccacacaggtgaaaagccttacaaatgcaaacagtgtggcaagtgctttaaCCAAGGACCACATTTGAGAACTCATGAAATAGTCCACACAGGTAAAAAGCCTTATgagtgcaaacagtgtggcacAACTGCATCACAATTTCGGACCCATGAAAGAGTccacacaggtgaaaagccttatgaatgcaaacagtgtggcacgTGCTTTAACCAAGCAGGAAATTTGAGAACTCATGAAAGGGTTCATACTGGTGAgaagccttatgaatgcaaactGTGTGGCACGTGCTTTAGCCGAGCAGGACATTTGAGAACTCATGAAAGGGTTCATACTGGTGAgaagccttatgaatgcaaactgtgtggcaagtgctttaaCCAAGCAGGAAATTTGAGAACTCATGGAAGGGTTCATACTAGTgagaaaccatatgaattcaaacAGTGCAGCAAGCGTTTTCGATTTGAAAATAGTTTGCGAACTCATAAAAGAGTCCACACGGGTGAaaagccttatgaatgcaaacagtgtggcaagtgttttccTCGAGCTGACAGTTTGAAGACTCATGAACGGGTTCATGCTGGCATGAGGAAATTAACCAGTAAGCGATCAAAACTAAAGACAACTCGCACAGAGGAGAAGCCGTTTACATGTAAacattgtggcaagtgttttatcCAAGCTGGAAATATGAGAACTCATGAAAGAATTCATACTGGTGAaaagccttatgaatgcaaacagtgtggcaaatgCTTTAACCAAGCAGGACATTTCAACATTCATAAAAGAGTCCACACAGGTGAgaagccttatgaatgcaaacagtgtggcaagtgctttagCGAAGCAGGAAGTTTGAGAACTCATGAAGGAGTCCACACAGGTGAcaagccttatgaatgcaaacagtgtggcaagtatTTTAAATATACATCAAGTTTGCGAAAGCATGAAAAAATCCACACAGGTGTTAAGCattatgaatgcaaacagtgtggcaaggaATTCAACCAAGCAGGAAATCTGCGGTCTCATGAAAGAGTccacacaggtgaaaagccttatgaatgcaaacagtgtgggaAGTATTTTAGAAATTCATCACATTTGCGATTGCATGAAAAAATccacacaggtgaaaagccttgtgaatgcaaacagtgtggcaagtgttttagaaaTGCATCACAATTGCGAACTCATGAAAGAGTCCACACAGGCGAaaagccttatgaatgcaaacagtgtggcaagtgttttagaaCCGCATTACAATTGCAAGTTCACAAAAGAGTCCACACGGGTGAaaagccttatgaatgcaaacagtgtggcaagtttTTTAAAACTACATCACAGTTGCGGACTCATGAACGAGTCCACACGGGTGAaaagccttatgaatgcaagcagtgtggcaagtgttttaaaaatGCATCACAATTGCGAACTCATGAAAAACTtcacacaggtgaaaagccttacgaatgcaaacagtgtggcaagtgttttatcCAGAGGGGAAATTTAAAAACTCATGAAAGAGTTCACACAGGGGAAAAGCCAtgtgaatgcaaacagtgtggcaagtgttttagcagAAGCGAACATTTGCAAATTCATGAAAGAATCCACACAGGTGAGAAGCCTTATCAGTGCAAACAATGTGGCAAGTGCTTTAACCAAACATCAAATTTGAGGAGTCATGAAAGAATCCACACTGGCAAGAAGCCTTAtaaatgcaaacagtgtggcaagtgttttagaaaTGTATCACATTTGACTCACGAAAGAGTTCATACTGGTGAgaagccttatgaatgcaaacagtgtggcaagggTTTTAGTCAAGCAACACATTTACGAATTCACGAAAGAGTccacacaggtgaaaagccttatgaatgcaaacagtgtgacaagtgttttagtcaacGAACACATTTACGAATTCATGAAAGAGTccacacaggtgaaaagccttacgaatgcaaacagtgtggcaagtgttttagccaaAGAGGATCTTTAAAGATGCATGAAAGAGTCCACTCGGGGGAAAAGCCTTATGAGTGCAAACAGCGTGGCAAGCGTTTTAGACTAAGAACAGATTTAAGGACTCACGAAAGAGTTCATACTGGTGAgaagccttatgaatgcaaacagtgtggaaAATGTTTTAGTCAAGCATCAAATttacgaacacatgaaagagtCCACACAGGTGAAGAGTGTAAGGGTGCTGTGGCAGCATCCGACATGCGAGAGCTCAAGCTTGGTTACTTTGAATGTTGGATTTGTCAGGAGGAGCTAGGTAGTCGAGCCCTACTTCTTGAACATTACGATAATCACATGACTATAGCTAATTGA

Transcript

ENSPTBT00000017496

Protein

UniProt (Swiss-Prot top hit)

No Swiss-Prot hit above the reporting threshold for this gene.

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0000085 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00096 all species →	zf-C2H2	Zinc finger, C2H2 type	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR013087 all species →	Domain	Zinc finger C2H2-type	Interproscan
IPR036236 all species →	Homologous_superfamily	Zinc finger C2H2 superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24381 all species →	ZINC FINGER PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000122 all species →	Biological Process	negative regulation of transcription by RNA polymerase II	Interproscan
GO:0001227 all species →	Molecular Function	DNA-binding transcription repressor activity, RNA polymerase II-specific	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K09228	KRAB; KRAB domain-containing zinc finger protein	-	Transcription factors	ko03000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.