Gene detail

Detailed information of ENSPTBP00000017935.1 in Oculina arbuscula

Genomic Location: :...
NR annotation: XP_020615517.1, uncharacterized protein LOC110053606 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSPTBT00000018723

ATGCTTCAATCTGCCAAACTGGAATGCCTCGCTCATTTTACTGCATCTAAGAAGAGAAAGGTCCAGTTTTCAGATTCATTGAAACTTGTGGCTGAACATAGCTTACAGACTGCAAATCCACAGTTTTACATTGAGATGTGTAAACTTGTTTTAGAACTACAACATCTTCTTGAAATGGACGAAAAAGCATCTGAAACTTGGTTTGATTACGGTATGTTTCTCTTTGGGCAAGGGGACTATTCTGGAGCAAAGAATGCCCTGGGAAATGCCATAAAAGGATTTAACAGCCTGGGGCATTCTATCAACACGTTCTTCCTCGGCCAATGTCACTTTCAGATGGGTGTTATTGATAGTCACCTTGGAAACTTTCAAGAAGCTATTATGTCATTTCAAAAAGCTCTAGAATCCAAGATTATGTTTGAAAAGGGAAACATGTCAACTGCAATTTGCCACCATTGGCTTGGATATCTGTACCGACAAAGGAAGTATCTTGAGAAAGCCCTTCAAGCTCAGAGCAGAGCTTTGCAAGAGATGGAGAAAGATGTAACAGATGCTACTTCAGGGAGCTTCATAAGTGACTCATGCTTTGAATTAGGATGCATTTACCACGAGATAGGAGACTTTGAAAATGCTGTTAGTTTCCATCAGAAATCTTTGTACATACGTGAGGAGCAAGCTTCTCATTTTAAACCAAAACTTCAGTCATACATTCATCTAGCTGCAGTTCTGTATGATAGAAGTGTAAAGTTCAGCAGGCCTTCTGTAGCCAATGAACTGATATCACAAATTGTTACTTTGCTTGACAAGGCTCTGACATTATGTCAAGAACAGGCCCAGAGTGGAAACTTGCGTGACAGATTTCCTATTATCATGCTTGCACATACAGACAGACTGGAAGGAATCAACGATATTCTTTCTTTAGCATGTGAACTTTGCAGAAATCTGTGTTCTTTATTGGGTGATAAAGACATAGAAGTAAAACAGAAAATGGAGAAACTAAAGGCTGATTTCAAGAACTTGCTTTGGACAATTCTTGTTCAGAAAATTAATAATGGTATTCTTTTACATAGAGATGAGGGGGATGATAAACAACTGCCGTCCAATGAGCAAGAAGAGGTGGAGCAAGTTCCTCCAGAAATTCTTGCAAGAGGAAACGTGGCTTTGGAAGCTTACAACAAGGCCCTTAGTGAAGGGATGACTTGCCTCAAGAGAGTGCCCATAATGTTTATTGGACAGGATCGTGCAGGGAAGACAAGCTTAAAGAAATCCCTGACAGGAACACGTTTCAACCAAGATGAAGACAGCACTGTAGGGATAGAAGTTGATCCATCACATTTCAAAGTGTCAACTGAGATTTGGAAGACAGGGCAGAAGGATGCGACAACAGATTCTGATGAAGTCATGTCTTGTGAGCACCATGCAGCGAGATTGGTCTTTGAAGCACTGAGGGAGGAAAAAGATGCCGCAGAGGAAAAGGTGTTGGGATCTGTTCGGCCAGGAAACATCCCCTTGGTTGACACAGTCTCTTCAACTCTAGACAGTGGTTTCACTACAATTGCACCTTCAAATGTCCTTGGTGCAGACAGTCATGATGCTGTTGAATTCTCTGGTATCTTGAAAGATTCAGAACCTAATGAAAAGCAAGCAGGTTCGGAGTCTATTCAAACATCCAGTAATCGTGAACCTGAGCATGTTCCCGATACATCAGCCCATGAGAAATCTGATCTCACCAAGGGGCAGGAAGACGACACTCCTCTTGTCGTACCCAAAATGCCAGAAGACGTAGCGACATTGATTGAAAGACTGCTCAAAGAAGTTGTTAATGTGGATGATGATGAAGACATCTATTCAGTCCTGTGGGATTTTGGTGGTCAATCAGTTTACTATGCAACCCACCCACTTTTCTTGACGGCCAGAGCGATGTACCTTTTGGTTTATGACCTCAGTCGGGATCCACATGAAAGAGCCAAACCTGTTGTAAAGCAAGGGATGTTCAAGAAATTCGAAGACAGTTTTGGCCCAAAAACTAATTTGAATCATCTAGATTTTTGGATGACTTCCGTTGCTTCCCTGGCCAGTCAAGGTGAATGCCAAGACGCAGTTTCCAATTCTGAGCTCTTGCCAGAGAAACTTCCTCCTGTGTTCTTGGTGTGCACGCATGCTGATAGTCCTCATGGTGGTGGTGATCCCAGGACAGTAGCCAAGGAGCTATTTGGGTCTCTACAGACCAAGCCATACAAAACCCACTTGTATGGAGATGTCTATGCCGTGGATAACACAAAGTCAGGCCATGAATTTGAATGTCCAGAAGTCACTCGCTTGAGGAGAGAAGTACTCGCTGCTGCTAAGAAGCTACCACAGATGAAAGAGGCCATTCCGATCAGGTGGTTAAATTTCGAGAGGGCACTTCAGGTCATGAGGAAGGATGGCCACAAATGGATTACCCTTGATAGTGTAAAACAAATCGCGTCTGAGGTATGCAATGTTGTTGAAGACAAAGAGTTCCAGACATTGCTGAACTTTTTACATGACCAGAGAATTTTGATTCATTTTGATGACACGCCAGAGTTGAATAAAGTAGTGGTGCTGGACCCTCAGTGGTTGGTAGATGTGTTCAAGAAGGTGATTACCGTCAAGCCCTATTGCCAACAAGAGAaggaatttaaagaactatGGTTTAAGCTTGAGACAACAGGCATCCTGGAGGAAAAGCTGTTAAAGCATGTTTGGGGCCCTTTGTTGGACCACAGAGAAACTTCAGGTAGCCTTATTGCAATCATGGAGAAATTTAGCTTGCTTTGTCTATGGCCTTCATCGGATGCTTCATGTGGCAAGCAGTACCTGGTGCCATCCATGCTGATGTCACATCCACCAGAAGCCATCACCAAGCTGGTTGCATCTGCACAAATTCCTTCTCTCTTTGTGAAATTTGAATCTGGTCAAGTTCCACCTGGCTTGTTTCCCCGACTGGTGCTGCAGTTTTTTCAGTGGGGTAAAGAAGAAGTCTGGAGCCCAGTAAACCCTCAGTTGTACCACAATTTTGCCAGATTCTTCACCACTGGAGATGACGATTGTTCTGTAATTCTTCTGTGCCATTCCTCGTCCGTTGAAATAGTTTTCCACAGAGGAAATGTGGGTCTTAAGTTAGAAGACAGTTTCCAGTCAAAGATGAACTTGTCTGCAGATGTTAATCATGACACCTTTGATGTGACTTGTGCTCGTGCTGTGTGCAGGCGGATGGGATTGATGCTTGAGTGTATGCGCAAGGAGTTCTGTTGGCTAAAGAACATGAGGTATGATCTGAGTGTCATCTGCCCTGTCTGCTGCCAAGGATGTGCAGTTATCTACTGTCGCACCCACCACACACAGGGTTGCAAACAAGAGGAATGCCTGCACTTCTGGTCGGGGTCCATGTTACGTGGCGGCAAGGATGTCATCATGTGCAGCAAGTCTGCTGCTGCCCAGAATAACAAAGTTCAAGTGAAGAAGTTCTCACCGTGGTTTGCATCCCTTGGTGAACAGTACAAGGCCTCACGCATATCATCCCATGTGATCAACGAAGAAAAACTGCTTGCTCTTCCCGACAAGGTTCTGGAATCACTTTTGTCACAGTCTTGTGATCCCGGCGAGGTCGTACTTCAACTGAAAGAGAGTCTGCAGCTGGACCAAAACTCCCTGAGGTATCCAGAGCCTGAAACCAAAAGATGGATCCGTTGCCTGGCAAGAAAAGCTAAATATTCAAACAGGCTTGACGTGGTTAAACACTTGAGAGAAGTTACACCCGCTGGAACTACTGGTCCTCTTTTGCATGAACACCTCGATATCCGAAGTATTCCAGTGACCCAGAGAAGAGAACTTACAATTGATTTGAGTAGTGGAGATGAATGGAAGGTTGTTGCTGAGAGTCTGGGCTTGACTCCACGAGAGATTCGTTTCCTTGACAACCGAACTCTGAACCCATGTGACGCTGCCCTGGCTTTCATTGCTAATCAAAGGCCCACAAGTGTGGGTGGACTGTACGATGTGTTAAATGAATGTGGCTTGCCCATGATAGCTGACCTTCTTTAG

Transcript

ENSPTBT00000018723

Protein

Uniprot

Uniprot term	Description
Q8SSS9	Probable serine/threonine-protein kinase qkgA OS=Dictyostelium discoideum OX=44689 GN=qkgA-1 PE=3 SV=2
Q5S006	Leucine-rich repeat serine/threonine-protein kinase 2 OS=Mus musculus OX=10090 GN=Lrrk2 PE=1 SV=2
Q5S007	Leucine-rich repeat serine/threonine-protein kinase 2 OS=Homo sapiens OX=9606 GN=LRRK2 PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF16095	COR	C-terminal of Roc, COR, domain	Family	Interproscan
PF17874	TPR_MalT	MalT-like TPR region	Repeat	Interproscan
PF08477	Roc	Ras of Complex, Roc, domain of DAPkinase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR032171	Domain	C-terminal of Roc (COR) domain	Interproscan
IPR019734	Repeat	Tetratricopeptide repeat	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR011990	Homologous_superfamily	Tetratricopeptide-like helical domain superfamily	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR051787	Family	Effector and Ciliary Development-Associated Protein	Interproscan
IPR036388	Homologous_superfamily	Winged helix-like DNA-binding domain superfamily	Interproscan
IPR000488	Domain	Death domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45641	TETRATRICOPEPTIDE REPEAT PROTEIN (AFU_ORTHOLOGUE AFUA_6G03870)	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0007165	Biological Process	signal transduction	Interproscan