Detailed information of ENSPTBP00000019346.1 in Oculina arbuscula

Genomic Location: not available for this species
NR annotation: PFX28093.1, Chondroitin sulfate ABC exolyase [Stylophora pistillata]
Species Oculina arbuscula · all data for this species · gene families

 Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
P59807Chondroitin sulfate ABC endolyase OS=Proteus vulgaris OX=585 PE=1 SV=2
C7S340Chondroitin sulfate ABC exolyase (Fragment) OS=Proteus vulgaris OX=585 GN=ChABCII PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0000631 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF09092
all species →
Lyase_NLyase, N terminalDomainInterproscan
PF02278
all species →
Lyase_8Polysaccharide lyase family 8, super-sandwich domainFamilyInterproscan
PF09093
all species →
Lyase_catalytLyase, catalyticRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008929
all species →
Homologous_superfamilyChondroitin AC/alginate lyaseInterproscan
IPR011071
all species →
Homologous_superfamilyPolysaccharide lyase family 8-like, C-terminalInterproscan
IPR015176
all species →
DomainLyase, N-terminalInterproscan
IPR003159
all species →
DomainPolysaccharide lyase family 8, central domainInterproscan
IPR008979
all species →
Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR011013
all species →
Homologous_superfamilyGalactose mutarotase-like domain superfamilyInterproscan
IPR014718
all species →
Homologous_superfamilyGlycoside hydrolase-type carbohydrate-bindingInterproscan
IPR039174
all species →
FamilyChondroitin sulfate ABC lyaseInterproscan
IPR015177
all species →
DomainLyase, catalyticInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR37322
all species →
-Interproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005975
all species →
Biological Processcarbohydrate metabolic processInterproscan
GO:0005576
all species →
Cellular Componentextracellular regionInterproscan
GO:0016829
all species →
Molecular Functionlyase activityInterproscan
GO:0003824
all species →
Molecular Functioncatalytic activityInterproscan
GO:0030246
all species →
Molecular Functioncarbohydrate bindingInterproscan
GO:0006027
all species →
Biological Processglycosaminoglycan catabolic processInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSPTBP00000019346.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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