Gene detail

Detailed information of ENSPTBP00000024433.1 in Oculina arbuscula

Genomic Location: chr3:27910374...27916224
NR annotation: XP_020627011.1, solute carrier family 25 member 38-like [Orbicella faveolata]
Species Oculina arbuscula · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

ENSPTBT00000025507

TAAGGAATTTCGCTGTGATAATTTGTCTCGTTTACAGATAGGAAGCTGTTCCTGtcctgtttgattttttgggatATTCTTCTTCTAAATTCGTGGACATTTAACGTGGATTATTGTTGTCGGAGGTAGGCACGTGAATCGAACATCAAGCGGCCAGAGATCATGTCCTGTTGGCGATCTTGGGTAACGAACGTTCGCGCCTAGCAAATTTTTGCTTGGACTGTTTATTCTCACCGCAACTTAGATCAGTCAAGGAAAAGGCGAAAGTTAACTCAATATTTACTTGGATTCACGATTGAATGGGTCGAAGCGGTCGTAAACATGATACATCCTTGGTGAAGGCTTTTATTGCCGGCTCTTTGAGCGGCACTTGTTCTACGTTGTTATTTCAACCATTTGAACTGGTGAAAACTCGTATACAAGTCGAAGGCATTGCTCTAACTCCAGCTGGGCGGCTCAAGTTAGGAGGTAGCAATGGCTTGCTTTACACATTTTACTCTGTGGCCCGAAGGGAACATGTCGTCGGGCTTTGGAAAGGCCTTGTTCCTTCGTTGTGGAGATGTGTTCCTGGAATAGGGATGTATTTTTGTGCTCTCCATGGCCTGACACAATTTACCAGTGAGGAAAGAACAATGGGAGAATCAGTTCTTTTAGGAGGATGTGCAAGAACACTAGCAGGAATCACTCTTTTGCCAGTCACAGTAGTTAAAACAAGATTCGAGAGTGGGTGTTATAGATATAACAGTATGCGACATGCATTGATGTCAATTTGGAAAATGGAAGGAGGCAAAGGCCTGTATAGTGGGCTGTTGGCTACAGTAGCACGCGATGCTCCGTTTTCAGGGCTGTACTTGATGTTCTACACCGAGCTGAAGAGACAGGCAAAGAATGAACTTGGCACACCTGAACTACGTCCACTTGAGACATTCATTTGTGGTGCATTTGCTGGAATCATGGCATCAGTCATAACTCAGCCAGCAGATGTGGTAAAGACAAGACTCCAGTTATTTCCAAGCGAGTATAATGGTACTGGCAGTGCTGTCTTTGCTATACTCAAGACAAATGGAGTACAAGGACTCTTTAATGGCATTGTTCCCCGCACTCTGAGAAGAACTCTCATGGCAGCTATGTCCTGGACTGTTTATGAGCGGCTTTCAAGAGAACTTGGGTTGACAACATGACATGCAGGAAAAAAATTAGTACCTTGTCAAGATGCAAGATCCATTTCGTCCTCTCAGCAACTGGATTCACGAGCAAAAAATCCAGAAGAAAGAGACTGTTCAGACAGTGAACAGACAGTGTTCCTGTAATCAAAGCTTGCAAACAAGTGAAACAGGCACTAGAGAAACACAAAACGTCTATTGTGCCGTTGCACACTTAAAGATAGGGAGACGATAGGCAGTTGTTTGTGAAACACTGAAAGATATGACAATTTTGCTCTTGGCAAGATTAAGATAATAACCACATTTCGAGGATGTGAAAATAATTTACTTTTAGAGTAAGAGGTATTGGCTTccatttcaaatggaattttaAAACTATGTTTTTATTGAGAACATTTGCCTGAAGTCAAGTAACTTGATTATAAGTTATGGGGTTTTGTGGTGAACTTTTTAAAGAAGGTTGACAAAGCTGACCAGCACAGTCTGCCAAAGTAAATTAAGTAATTTAATTGTGTTGTACCTTAAAATATCTATACCTTCCCCttggaaggttttttggtttgaccTCCCCTGACCCCCCCATCTCTAGGAATTCCAGTTAAGCTTACTACTTTCCTTCAAATATTTTGGCTACTGAGACCCTCCCCCTTAAAATTTCCAGTGACCTTTTGtagggtgggtatggatattttctggaaccataCATTTTAAGTTATGGTTTATAGGTCAAgcttttttttgacaaagccaAACAACCAATAAAAAAGGCATTTATTTCCTTGCTTACAAAGGGAAGTGATAAAATTAATCTGTACACTTAAAACAGTCTTTCCATGATTTATGCAAAGAAAATAGTAAGTCGGTTTGATTTCTAAAATTGGTCGTCATGCTGGCTACAAGAGTGTGACTTGTTTTTAGAGAACTACCAGACACTGCAGTTCTCATTTATCATTGTTTATGGTTTGAGCACAACTGagtgatatatttatttccGAGTAAGAGAATAAGTTGCTAAGT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q6DE75	Mitochondrial glycine transporter OS=Xenopus laevis OX=8355 GN=slc25a38 PE=2 SV=1
P0CAT2	Mitochondrial glycine transporter B OS=Danio rerio OX=7955 GN=slc25a38b PE=2 SV=2
Q96DW6	Mitochondrial glycine transporter OS=Homo sapiens OX=9606 GN=SLC25A38 PE=1 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004751 (this species only) · gene tree & orthology

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00153 all species →	Mito_carr	Mitochondrial carrier protein	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023395 all species →	Homologous_superfamily	Mitochondrial carrier domain superfamily	Interproscan
IPR018108 all species →	Repeat	Mitochondrial substrate/solute carrier	Interproscan
IPR002067 all species →	Family	Mitochondrial carrier protein	Interproscan
IPR030847 all species →	Family	Mitochondrial glycine transporter Hem25/SLC25A38	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46181 all species →	MITOCHONDRIAL GLYCINE TRANSPORTER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0015187 all species →	Molecular Function	glycine transmembrane transporter activity	Interproscan
GO:1904983 all species →	Biological Process	glycine import into mitochondrion	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005743 all species →	Cellular Component	mitochondrial inner membrane	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K15118	SLC25A38; solute carrier family 25, member 38	-	Transporters	ko02000	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.