Gene detail

Detailed information of ENSPTBP00000025028.1 in Oculina arbuscula

Genomic Location: :...
NR annotation: XP_020600902.1, kinetochore protein Nuf2-A-like [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSPTBT00000026144

ATTCTTTCAACATGGCTTCCGAACACAACAAATTCCGATTTCCCATTTTAACAAGCGAAGAAGCCGTAGCAAATTGTAAGTCAATGTTTGGATCACAAGTTGCATTAAGTCTTGACGATCTTTCGCGACCACAGTTTCAGCAGATGAAACGGTTCTATATTGGAGTTCTTTCAAACTTTGGTGTTTGCCCTGAGCAACTTACACAGCCTCAGTTCAAGTCAATGGATGCCTTTGAACACCCAGAACTTCATGAAGAAAGTGCTCCATTAGTGATTCTGGCACTAGctttGCAACGATTCATGTTTGCTTGTGGAGTGGAAAATTTCAGCATCTTTGACATAGTTGCACCAAAACCAAAACGTACTCTACATTGTATAAGTGCCATTGTTAACTTCACAAAATTCAAGGCTTCACGAGAACACATTTATGAAAAAGCACTTGCAGAAGTGGACACAGCCAGTGAGCAACGTCAGCAGTTGCTTGCACGGAATCAAGAActccagaaaaaaatattggaactTAAAGCAAAAAGAGCAGAGGAGGAACAACAAGTACAGAAGCTTGACAGTGAAGTCCAAGAATTACAAAATAGTGTTAGTGACCTCAACAAACAGCAGGCTGCAGAAGTGAAAAACTTTCAACAACTGAAGACCTATAATGCTGAACTCAGTTCAAAAAAGGCCGAAGTAAAAGTAAACTTAGCTGCTTTGAAGCAAGACTGTGAAAGTCTTAAAGCCAAGATTGTACAGTCACCTGACAGATTCAAAGGGGAATTGGCTCGTCTTACAAGTGCAGTGCAGTCTGTAAGAGAAGCCAGGGATGAGAGAAGTACCCGGCTACAAGAAATCTGTGCCCAGCAAGATAGCAGCCTGCAGTATACAGAGGATGGCCAGACAGCCTTGAAAATGATAACAGGAATTGGCCTCGACATGGACAAACTGCGAGAGGAGACTGCCAAGCTTGAAGAGCTTCAAGATAAAAATGTCAGTCAAAAAGAAGTGCTAAGAGACATGACTGCAAAGATAGAGcaaCTCCGCCGACAGCAAGCCTCAAAACAAGAGAAACTTTCCCGACTGATAAGGCAGTATGATAAGAAGGTTGCCGCCAACCACGATGCTACAGATCAATTAAAAAGAGAGTGTGCacatttagaaaagaaaatagCAGAGAAGGAAAATTACCTGGAGGGACAAGACAAGCAGATGGCCAATCTGTCAAGAATGGTCAAGGAAGAGGAAGATCTTCATGAGCAGGACATGGAAAAACTACGAACAGCGTATCAACAGATGTTAGCACAGCTTGAAAACTACCACCAAGGACTTAACAGAGGCTGGGATAAAGTTATGACTGCCaataacagataaaaaaaatatatatatgaaaactTCAGAAATCTTGGATGTTTAAACATTACATGGCTTGTATGCATGTAGATGATTGTatgttgtaattttaaattacttgTACAGGTTGTGTACATGTAGCTCAGAGAATTTTTCAAACCATTTGTCCTTCATGAGTACTTGACCACCCTATTCAAATGCATAGTGTAACATTTTGcaacatgtacaatgtacattaaaagtatttttttttttaatttaacaattatgAAGCAACTAGTAAAAATGAACTGAtaacaaaatcttttacaaaaaactaGACTAAAGCTACAGTATACATGTAGTTTCAGTGGTCTGTTATCTCTGTAGATACTGTATCTCCCTTCAACACAATGTACATAATACACTGCAATCTAGCATGCATGTAGACTGGGAGCAATTTCAATTATTCTCTGAATTGACAAAGACTGCTCTATGCATATCCTGAAGTGCATTGTCACACTAGAAAATCATGTAACCTTTTTGTAagcaaaaaaacagtaactgtTTATTTTTACGAGAAAAAATGCGCAGTTGAACTTTAACCATGTGGTTTAAAGCTTTGTTAAGCTTCTTGTTATTGCATCACTGAAGTTACTAGTGGGAAAACTTAGAACCCAGTTATGAAGTCATCACTTATATCAAATATGCACGTtgcagtgtacatgtacaataacGTGACTTTGTATATAAAGTTAACAGATTGATAAACCTATCTTGAACAGGGATCCACATCTACAGCATACAATGTATAGTACATGTACGTACATGTAATAtatcattaaagatgtgaatcatgtacatgtaatatgaTAAATTTTACTACAAAACCAATCTGTACTACGTGTTCAAAAACAGTGTAATTGAGTGGTTGCCACAGAAAACACTGGTTGCTTTTTTGATGCAAGCCAGTTTT

Protein

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03800	Nuf2	Nuf2 family	Family	Interproscan
PF18595	Nuf2_DHR10-like	Nuf2, DHR10-like domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR038275	Homologous_superfamily	Nuf2, N-terminal domain superfamily	Interproscan
IPR005549	Domain	Kinetochore protein Nuf2, N-terminal	Interproscan
IPR041112	Domain	Nuf2, DHR10-like domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR21650	MEMBRALIN/KINETOCHORE PROTEIN NUF2	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0007052	Biological Process	mitotic spindle organization	Interproscan
GO:0031262	Cellular Component	Ndc80 complex	Interproscan
GO:0044877	Molecular Function	protein-containing complex binding	Interproscan
GO:0045132	Biological Process	meiotic chromosome segregation	Interproscan
GO:0051315	Biological Process	attachment of mitotic spindle microtubules to kinetochore	Interproscan
GO:0051383	Biological Process	kinetochore organization	Interproscan
GO:0000776	Cellular Component	kinetochore	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11548	NUF2, CDCA1; kinetochore protein Nuf2	-	Chromosome and associated proteins	ko03036	deepkoala