Detailed information of ENSPTBP00000035149.1 in Oculina arbuscula

Genomic Location: chr6:28858792...28861454
NR annotation: XP_015775840.1, PREDICTED: probable RNA-binding protein EIF1AD [Acropora digitifera]
Species Oculina arbuscula · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q7SY07Probable RNA-binding protein EIF1AD OS=Danio rerio OX=7955 GN=eif1ad PE=2 SV=1
Q0V9J5Probable RNA-binding protein EIF1AD OS=Xenopus tropicalis OX=8364 GN=eif1ad PE=2 SV=1
Q5HZM1Probable RNA-binding protein EIF1AD OS=Xenopus laevis OX=8355 GN=eif1ad PE=2 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0008135 (this species only) · gene tree & orthology

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01176
all species →
eIF-1aTranslation initiation factor 1A / IF-1DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR006196
all species →
DomainRNA-binding domain, S1, IF1 typeInterproscan
IPR039294
all species →
FamilyProbable RNA-binding protein EIF1ADInterproscan
IPR012340
all species →
Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR001253
all species →
FamilyTranslation initiation factor 1A (eIF-1A)Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21641
all species →
TRANSLATION INITIATION FACTOR-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0003723
all species →
Molecular FunctionRNA bindingInterproscan
GO:0003743
all species →
Molecular Functiontranslation initiation factor activityInterproscan
GO:0006413
all species →
Biological Processtranslational initiationInterproscan
GO:0005634
all species →
Cellular ComponentnucleusInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ENSPTBP00000035149.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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