Detailed information of ENSPTBP00000036407.1 in Oculina arbuscula

Genomic Location: :...
NR annotation: PFX25811.1, Nidogen-1 [Stylophora pistillata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
A2ARV4Low-density lipoprotein receptor-related protein 2 OS=Mus musculus OX=10090 GN=Lrp2 PE=1 SV=1
Q8TER0Sushi, nidogen and EGF-like domain-containing protein 1 OS=Homo sapiens OX=9606 GN=SNED1 PE=1 SV=2
Q70E20Sushi, nidogen and EGF-like domain-containing protein 1 OS=Mus musculus OX=10090 GN=Sned1 PE=2 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF12947EGF_3EGF domainDomainInterproscan
PF12946EGF_MSP1_1MSP1 EGF domain 1DomainInterproscan
PF06119NIDONidogen-likeFamilyInterproscan
PF07645EGF_CACalcium-binding EGF domainDomainInterproscan
PF00754F5_F8_type_CF5/8 type C domainDomainInterproscan
PF12661hEGFHuman growth factor-like EGFDomainInterproscan
PF07474G2FG2F domainDomainInterproscan
PF00058Ldl_recept_bLow-density lipoprotein receptor repeat class BRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000742DomainEGF-like domainInterproscan
IPR000152PTMEGF-type aspartate/asparagine hydroxylation siteInterproscan
IPR018097Conserved_siteEGF-like calcium-binding, conserved siteInterproscan
IPR024731DomainEGF domainInterproscan
IPR009017Homologous_superfamilyGreen fluorescent proteinInterproscan
IPR006605DomainG2 nidogen/fibulin G2FInterproscan
IPR009030Homologous_superfamilyGrowth factor receptor cysteine-rich domain superfamilyInterproscan
IPR000033RepeatLDLR class B repeatInterproscan
IPR024730DomainMerozoite surface protein, EGF domain 1Interproscan
IPR003886DomainNIDO domainInterproscan
IPR008979Homologous_superfamilyGalactose-binding-like domain superfamilyInterproscan
IPR003645DomainFollistatin-like, N-terminalInterproscan
IPR001881DomainEGF-like calcium-binding domainInterproscan
IPR011042Homologous_superfamilySix-bladed beta-propeller, TolB-likeInterproscan
IPR000421DomainCoagulation factor 5/8 C-terminal domainInterproscan
IPR049883DomainNOTCH1 EGF-like calcium-binding domainInterproscan
IPR013032Conserved_siteEGF-like, conserved siteInterproscan
IPR002889DomainCarbohydrate-binding WSCInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR24039FIBRILLIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005509Molecular Functioncalcium ion bindingInterproscan
GO:0007160Biological Processcell-matrix adhesionInterproscan

TOP