Gene detail

Detailed information of ENSPTBP00000037739.1 in Oculina arbuscula

Genomic Location: :...
NR annotation: XP_020609775.1, uncharacterized protein LOC110048329 [Orbicella faveolata]

Gene Structure

More details in Jbrowse

Sequence

CDS

ENSPTBT00000039470

ATGTTCATAATAAGTCCTGTGATTTCATCACTAGAAACCAGGTTGTCAGAATTAAATAGAGCCGCACTTGATGTTGGTGGAGGTGGTGACTGTTTTTTTCGAGCTGTTTCACATCAACTGTATGATAATCCTAATCACCATTTTCATGTGCGTAGTCTTGGTGTTCAGTATTTACAGCATAACCCTGAACAATTTATAGAGAGTAATACTGATTATTCTTGGCAAGGATATTTAAGAAATATGTCATGTGAGGGAACATGGGCTGATGCGATTATAATTCAAGCAGTGGCCAATTGTCTGAATTTGTCAATTCATATTACTGAATCAAATGAAACTTTTGCACCTGTTACTGTTGTGCAACCAGCAAGTGTAACGAGAGGACGCACAAACATTTACATTGGGCACATAGGTGAAACGCATTATGTATCTACAGtagtaaaaacaaacaagacaaaatGTGGTCAAACATCAGTTGAAGACAACCTAATtgatagaaaagaaaaacgcagAGCTTACATTAGAGAATACATGAAAAAGAGAAGAGCTGATCCAGAATTTAGAAAAAGAGAGAATGAAAATTCACTGCAGAAAATAcacaaaaatattgaaacagcTAGGGAGAAAAATAACAAAGCTGCCTCAAAAAGGAAAATCACCAACCCAGAACATTTGAGGGAAATTTTTAAACagtcaaaaagaaaaaggaaagcgAAGAACCCAGAACTCATACGGGAAGTTGCCAAACAGTCTAAAAGAAAACGGAAAGCGGAGAACCCAGAACTCATACGGGAAATTGACAAACAAGGAACGGCTAATATCACCACGTATTCCATTCATGCAAATTCATTGTTCTTAAGTGGAGGTGCTGGAGTTGGGAAAAGTACCGTAACTAATGCGTTGTATGAAGCACTGATAAGATATCTGAACAGTATGGCAGGAGAAAATCCAGATGATGTGAAAGTTGTCAAAACAGCCCCTACCGGCAAAGCAGCATTCAATATAAAAGGTAACACACTGCATTCTGCTTTTAAGATACCTGCCAATAGAGGTTTTGAGTACTGTGCACTGGATAGTGACAGACTAAATACCATTAGAACACAACTCATAAAACTAAAAGCAATATTTATTGATGAGATCTCTATGGTTGGAAGTGGAATTAACATTTGGACAGAATACTTCACCCTCTTTGAATTAACAGAAATCATGAGACAAAAGGATGATAAGCAGTTTGCTGAGCTACTCAATCGCTTGAGAGAGGGAAAGCACTCTGAAGATGATATAGCCATGTTGAAACAAAGACTTTTGAATGTAACACCAGGAAATGATAATTACCCAATGAATGTCACTCATTTGTTTACTACAAATGCATCAGTAGATGCTCACAACAATGCCCTGTATACTCTCTCAAAAACTGATAAAGCTCAGATCAAAGCTGTGGACATTTTAGTGGGAGATATGTCTGATGATctaaagaaacaaatgaaaaataaaatcccAGATGACCCCACAAAGACAATGGGCTTATATTCATTAGTGTCGATAGCAACTGCCGCAAAATACGACTTGACAACTAATATTGATGTTACTGATGGACTCACTAATGGTGCAGAGTGTGTGATAGAGAACATAGATTACAGAGTTGACAATTCCACCAGGCCAAGTATTATTTGGGTGTCATTTCCACATCCTGAAATAGGCAAAAAGCAGCGCAGAGAAAATGCACATTTGTACAAGACAAACATAAAGAAAGACTGGACACCAGTTTTAGAAGTAACAAGACAATTCCGAATCAGTAAAAAAAGTCAAGTACAAATTCTCAGGCGACAATTTCCGCTTAGACCTGCTGCTGCCAAGACTATTCACCGTTGCCAAGGTGACACATTAGATGAAGCAGTTGTTGATTTTCCAGCATCCACAAGGGAGCACATGCATTACGTTGGCTTAAGCAGAGTAAGAAACAGTTCTGCACTTAGTATTCTCAAattgaatgaaaacaaaattaaggtgagcgaaaaagtaaaaaatgaaatgagCAGACTCAGAAAAGAAGCAAGCCTCAGGCCTTTAGCAGTTTTAGAGACTGTACATGTAGATTCTccccaaacaaaaacaatcttgTTTCAGAATGTAAGATCTCTCCACCTCCACATAGAGGATGTGCGAAGTGATTACAACATTCAAAAAGCTGATGTCAATATTTTTGTTGAAACAAAGCTTTGTTTGTCAGACACAGATGAAACATACCAGCTGAGTGGATTTACACTTTACAGAAATGACTTCAATCAGTCTACCTTGAGAACTTGCTATGGAACTGCCGTGTACATAAAGAATGATTTGAGTTGTATTGAAATTCCATACAGGTTAAACTTTAATAATGTAGAAATAACTGTTATGGTTCTAAGCCATCCAATTCCAAATTTTCATGTGGTTGGTATCTATCGGTCTAAAGCTAATGTTTCAATTTCACAGTTCATTGATGCACTCACTCATCTTCATAACTCAGTATTGACAAACTCTACCATACCCACTGTAATCCTTGGGGATTTCAATATCAATCTAATGCAGGACACTACAGAACAAAAGGCTCTCAAAAAATGTTTGATAACAGACAGAGGATACAATCAGTTGATCAACCAGTATACAACTGACTACCGTACACAGATAGATCATATTTACACAAATGTACCACAAATTGTACAATCTGCAGGTACCCTGGAGTCCTACTACAGTGATCATAAGCCCATCTTTATTTCCCTAAAAGCTATGTGA

Transcript

ENSPTBT00000039470

Protein

Uniprot

Gene family

Uniprot term	Description
Q0P9V4	ATP-dependent DNA helicase Pif1 OS=Campylobacter jejuni subsp. jejuni serotype O:2 (strain ATCC 700819 / NCTC 11168) OX=192222 GN=pif1 PE=1 SV=1

Gene family	Subfamily
Ubiquitin Family	DUB\|OTU\|OTU

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02338	OTU	OTU-like cysteine protease	Family	Interproscan
PF05970	PIF1	PIF1-like helicase	Family	Interproscan
PF03372	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003323	Domain	OTU domain	Interproscan
IPR010285	Family	DNA helicase Pif1-like	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR038765	Homologous_superfamily	Papain-like cysteine peptidase superfamily	Interproscan
IPR051055	Family	PIF1 DNA helicase	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47642	ATP-DEPENDENT DNA HELICASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000723	Biological Process	telomere maintenance	Interproscan
GO:0003678	Molecular Function	DNA helicase activity	Interproscan
GO:0006281	Biological Process	DNA repair	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan