Detailed information of ENSQNNP00000001255.1 in Candelabrum cocksii

Genomic Location: chr10:5429435...5446090
NR annotation: XP_048582908.1, RIMS-binding protein 2 isoform X4 [Nematostella vectensis]
Species Candelabrum cocksii · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q8QFX1RIMS-binding protein 2 OS=Gallus gallus OX=9031 GN=RIMBP2 PE=1 SV=1
Q7TNF8Peripheral-type benzodiazepine receptor-associated protein 1 OS=Mus musculus OX=10090 GN=Tspoap1 PE=2 SV=2
Q9JIR0Peripheral-type benzodiazepine receptor-associated protein 1 OS=Rattus norvegicus OX=10116 GN=Tspoap1 PE=1 SV=2
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0002276 (this species only) · gene tree & orthology
Ubiquitin familyUBD|Other|SH3 · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14604
all species →
SH3_9Variant SH3 domainDomainInterproscan
PF07653
all species →
SH3_2Variant SH3 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003961
all species →
DomainFibronectin type IIIInterproscan
IPR001452
all species →
DomainSH3 domainInterproscan
IPR036116
all species →
Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR040325
all species →
FamilyRIMS-binding protein 1/2/3Interproscan
IPR013783
all species →
Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036028
all species →
Homologous_superfamilySH3-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14234
all species →
RIM BINDING PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →
Molecular Functionprotein bindingInterproscan
GO:0007274
all species →
Biological Processneuromuscular synaptic transmissionInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K19922TSPOAP1, BZRAP1, RIMBP1; peripheral-type benzodiazepine receptor-associated protein 1-Membrane traffickingko04131deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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