Gene detail

Detailed information of ENSQNNP00000001713.1 in Candelabrum cocksii

Genomic Location: not available for this species
NR annotation: EDO45888.1, predicted protein [Nematostella vectensis]
Species abbreviation CCOCK · all data for this species · gene families

Sequence

CDS

ENSQNNT00000001794

ATGTCTTTATATCAAAAACCAAAGAACAGGAAAGGGGCGTTCATGGCACAGGTTTATAGTTTTTATAACGTGAAAAAGATAGGAACCAGTAAAGAGACTGcagattttttgaagaatgttCAAAGGAAAAAATCAGTTGTGACCACATGTTTGCTACCTATTACTGTTCCTAGTGGTGTAACTGCGGATGAAGCCAACGTACTAAAAATGAACGTCACGAGAAAGTTAACGgTTGGGCCTGAATCTCAATTCATTCCACAGTACAAACAAGAGAACTCTAAGGTTCCACAATTCATGCTACTGCACTTCTCGCCGCAAAAGCTTGCATGGGATTGGTTAATATTGTTCATTGTCACTTACATCGTGATTGCTGTGCCGTTTAATATCGCCTTTAAAACTAAAGACCCGTTTATCGTTTACATGGTCGACTTGTTCCTGGAATTGTTTTTTATCGCCGACATTTTTATCAACTTTCGTACGACATTTATCGAATCACAAACTGGTCGACTGATAACCGACTCAAAAACTATTGCGATCAACTACCTCAAAGGGTGGTTCGTTTTAGATGTTTTACTGGCTTTGCCATTTGAGCTTGTGTACTTTGTGAATCCAGCTTTGgAATCGTTGGTATCACTAATAAAGACTGGTCGTTTGATCCGTTTGTTGCGTGCTTGTAGACGTGTCATACGCTACGTGGAGTATACTGCAACGTTGATTCTTCTAATGGTTTGCTCGTTTGTTCTCCTGGCCCACTGGCTCGCCTGTGTCTGGTACATCATCGGAACGAAAGACTTCGAATCAAACTACACAGAAGGATGGTTATATAAACTGGGTAACAGACGAAATCTCTGTTCGACAGGGAACCTCACATACCAAGAAATAAACATTAGCGAACAATACGTCAGCtcgttatattttatttttaccagTTTGACCACTGTTGGTTTCGGTAATATTTCACCAAATACAGTTGCGGAAAAAATCTTTGcggtttttgttcttttgatgGGAGCTATAGTTCAATCGGCGATATTCGGCAACATGACGGCCATCATACAGAAGCTGTACAGCGCACGCGCCAAGTTTTACGCCAAGGCCTCACAAATTAAGCTTTTTGTACGTCATCATCAACTCGAGGGAGACCTCAGAAGGAGAATCGAGGACTGGTTCATATCGCAATGGTCCAGTAGCAGAGGGTTCCAAACAGATGAAATGCTTCAAAGCTTTCCCGCGGAGTTACAATCGGATATTTGTTGTCACCTGTACAAGAGCTTCTTGTCACTGCCATGCTTTAAACACGCTAGCAGAGGATGCTTAAGATCGCTGTCACTTAAGGTGCGCAAATGTCATTTCAGTCCCGGAGAGTTGATCATCAAGGAAAGCGACGCAATCAACAGTCTGTACTTTGTACAACGGGGAACGCTAGAAGTGCTACAGGGAGGCTACATCCTGGCGATTTTAGGTACTGGTGATTTGTTTGGTGAGGACATCTCAAAACCTAAGCCCATAAAGAGATCGAACGGGGATGTTCGCGCTTTAATGTATTGTGACATACTGTACTTAACTCGAGATATTATAAAAGATGTGCTGAGATATTACTCAGATTTTGCCGAACCCttctcaagaaatatttccttaGCCGTTGACATTTCCGCCAAAGAAAAAATAGTCTCAGCGAGTAGTTTGGAAAACATCGTGGAAGAGTGTTCAAATTTGTATTCGTCCACAAATATTTCAAGTACAGATAGTGAATCACCGCGGAAACTACAAAGGAAGAAACCGTCGTCTCCTGAGAATGACCGCCTGCCTATGTGGCAGCAGAAACTTCAGATTAAGGAGGCTTTAATTGAACGTTCAAATGACAGTAAAAAACGAACATTCGACAATCCTGAAGTCATAGCAACAGTGAGTAGACATAGTACAGCAGTACACAGGACAAGTCAGGGTAACAAACTGAATAGATCTATGAGAATAACAAGCTGCTCTATCGACAACGGAAATGAATCGGCGACCAAACACTCACCCCTAACCCCTGTACGAAAAAGGCGACCTCCTTCCATACAAAGCATTTACAGCAAGGGAAAGTTCAAAACCAAGCGTAATTGCGGTTctaatttaaagaaaacttttgaCACCTCATTGGATTCTATGGAGAGCGAAACGTACAAACAAAATGTAAGTCTAGAGGAGTATCGGACGCCCATCATTACAGTAGACAACATGGAATCTCTTAAGAACCAAAGTTGTTCCTATAATGACCAGTGCAGACACTTAGACACAGATCAGGGTATATATTCCCAGTGTTCGTCGCGGTCGGGAAGTATGTGTGAAACAACGAGCGAAAGTTATGATCGTACAGCAAAATATGTTAAGAGATTCGTTCATTGTAGAGATTTCAAAGACGAAAGACCGATGGACGTTAGAAAAGAAGAACTTTCGAGCTTGAAAAGCGAGTTAAATGATATCAAAAGCACTGTGGAAACACTagcaaaatttataaaatcaaagCTGTAA

Transcript

ENSQNNT00000001794

TTCTCTCTAGCGCGATTAAACAGCTGGTTAGGAATAGAAAGAAATTTCTAcaccttattttcttattacGAGAAGTTAGAGACAATGGGCAGAATGGATGAAAatcaaataataatttcatgGTTCTCAAAAAATTCGAACTGTCTTTAGTTTAGATAGAGCgtttttacaataattttgCATTGTGTggttttcttatttattttgtaacttTGGTGTCAGTAATATACAAGAGCTTGACCAACATTCTGAGTCGTCATATAGATGATACGGTGACAAAAACCAAACACGGTTTGACCATGTCTTTATATCAAAAACCAAAGAACAGGAAAGGGGCGTTCATGGCACAGGTTTATAGTTTTTATAACGTGAAAAAGATAGGAACCAGTAAAGAGACTGcagattttttgaagaatgttCAAAGGAAAAAATCAGTTGTGACCACATGTTTGCTACCTATTACTGTTCCTAGTGGTGTAACTGCGGATGAAGCCAACGTACTAAAAATGAACGTCACGAGAAAGTTAACGgTTGGGCCTGAATCTCAATTCATTCCACAGTACAAACAAGAGAACTCTAAGGTTCCACAATTCATGCTACTGCACTTCTCGCCGCAAAAGCTTGCATGGGATTGGTTAATATTGTTCATTGTCACTTACATCGTGATTGCTGTGCCGTTTAATATCGCCTTTAAAACTAAAGACCCGTTTATCGTTTACATGGTCGACTTGTTCCTGGAATTGTTTTTTATCGCCGACATTTTTATCAACTTTCGTACGACATTTATCGAATCACAAACTGGTCGACTGATAACCGACTCAAAAACTATTGCGATCAACTACCTCAAAGGGTGGTTCGTTTTAGATGTTTTACTGGCTTTGCCATTTGAGCTTGTGTACTTTGTGAATCCAGCTTTGgAATCGTTGGTATCACTAATAAAGACTGGTCGTTTGATCCGTTTGTTGCGTGCTTGTAGACGTGTCATACGCTACGTGGAGTATACTGCAACGTTGATTCTTCTAATGGTTTGCTCGTTTGTTCTCCTGGCCCACTGGCTCGCCTGTGTCTGGTACATCATCGGAACGAAAGACTTCGAATCAAACTACACAGAAGGATGGTTATATAAACTGGGTAACAGACGAAATCTCTGTTCGACAGGGAACCTCACATACCAAGAAATAAACATTAGCGAACAATACGTCAGCtcgttatattttatttttaccagTTTGACCACTGTTGGTTTCGGTAATATTTCACCAAATACAGTTGCGGAAAAAATCTTTGcggtttttgttcttttgatgGGAGCTATAGTTCAATCGGCGATATTCGGCAACATGACGGCCATCATACAGAAGCTGTACAGCGCACGCGCCAAGTTTTACGCCAAGGCCTCACAAATTAAGCTTTTTGTACGTCATCATCAACTCGAGGGAGACCTCAGAAGGAGAATCGAGGACTGGTTCATATCGCAATGGTCCAGTAGCAGAGGGTTCCAAACAGATGAAATGCTTCAAAGCTTTCCCGCGGAGTTACAATCGGATATTTGTTGTCACCTGTACAAGAGCTTCTTGTCACTGCCATGCTTTAAACACGCTAGCAGAGGATGCTTAAGATCGCTGTCACTTAAGGTGCGCAAATGTCATTTCAGTCCCGGAGAGTTGATCATCAAGGAAAGCGACGCAATCAACAGTCTGTACTTTGTACAACGGGGAACGCTAGAAGTGCTACAGGGAGGCTACATCCTGGCGATTTTAGGTACTGGTGATTTGTTTGGTGAGGACATCTCAAAACCTAAGCCCATAAAGAGATCGAACGGGGATGTTCGCGCTTTAATGTATTGTGACATACTGTACTTAACTCGAGATATTATAAAAGATGTGCTGAGATATTACTCAGATTTTGCCGAACCCttctcaagaaatatttccttaGCCGTTGACATTTCCGCCAAAGAAAAAATAGTCTCAGCGAGTAGTTTGGAAAACATCGTGGAAGAGTGTTCAAATTTGTATTCGTCCACAAATATTTCAAGTACAGATAGTGAATCACCGCGGAAACTACAAAGGAAGAAACCGTCGTCTCCTGAGAATGACCGCCTGCCTATGTGGCAGCAGAAACTTCAGATTAAGGAGGCTTTAATTGAACGTTCAAATGACAGTAAAAAACGAACATTCGACAATCCTGAAGTCATAGCAACAGTGAGTAGACATAGTACAGCAGTACACAGGACAAGTCAGGGTAACAAACTGAATAGATCTATGAGAATAACAAGCTGCTCTATCGACAACGGAAATGAATCGGCGACCAAACACTCACCCCTAACCCCTGTACGAAAAAGGCGACCTCCTTCCATACAAAGCATTTACAGCAAGGGAAAGTTCAAAACCAAGCGTAATTGCGGTTctaatttaaagaaaacttttgaCACCTCATTGGATTCTATGGAGAGCGAAACGTACAAACAAAATGTAAGTCTAGAGGAGTATCGGACGCCCATCATTACAGTAGACAACATGGAATCTCTTAAGAACCAAAGTTGTTCCTATAATGACCAGTGCAGACACTTAGACACAGATCAGGGTATATATTCCCAGTGTTCGTCGCGGTCGGGAAGTATGTGTGAAACAACGAGCGAAAGTTATGATCGTACAGCAAAATATGTTAAGAGATTCGTTCATTGTAGAGATTTCAAAGACGAAAGACCGATGGACGTTAGAAAAGAAGAACTTTCGAGCTTGAAAAGCGAGTTAAATGATATCAAAAGCACTGTGGAAACACTagcaaaatttataaaatcaaagCTGTAAAAAATACGTAAATGAATGTATCTTAAAGAAATCGCTATATGTATACTACATTAAAAAATggtaaatttttataatagtTTTCGAAAACAGTACACATATTTCCATCAAGGCATTTCTTTACCAGCAAAACGGCATGTTTGTCGAACTCATTCTTTAGGCTACCAgaattttgtttcaatatCAAAGATGCTCGTGAATCTATAGATGACAATTTCGCGAGTTGAGTCTTTGTTAGCATTAAATTAACGATGCAATTGTACTTCAATGCGGTAACGATAATACACTGATAAATTGCAAATGCAGCTTTTATGGTCAGCATTGGTTTAAGCTTTCTCAAAAGTCCAATTTTCGACGAtgcctttttatattttcgatCAAAGTCATTTGCGAGATTCAAATGGTTATCTAATTCTGTTCCGAGGTACGTGTAGGGTGTAGTACAGTTAATTTCTGTACCACTACAAAACAATCTGAGATTCCT

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9H252	Voltage-gated inwardly rectifying potassium channel KCNH6 OS=Homo sapiens OX=9606 GN=KCNH6 PE=1 SV=2
O54853	Voltage-gated inwardly rectifying potassium channel KCNH6 OS=Rattus norvegicus OX=10116 GN=Kcnh6 PE=1 SV=1
O08703	Voltage-gated inwardly rectifying potassium channel KCNH2 (Fragment) OS=Cavia porcellus OX=10141 GN=KCNH2 PE=2 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004291 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00520 all species →	Ion_trans	Ion transport protein	Family	Interproscan
PF00027 all species →	cNMP_binding	Cyclic nucleotide-binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014710 all species →	Homologous_superfamily	RmlC-like jelly roll fold	Interproscan
IPR005821 all species →	Domain	Ion transport domain	Interproscan
IPR050818 all species →	Family	Voltage-gated potassium channel family H	Interproscan
IPR003949 all species →	Family	Potassium channel, voltage-dependent, EAG	Interproscan
IPR000595 all species →	Domain	Cyclic nucleotide-binding domain	Interproscan
IPR003938 all species →	Family	Potassium channel, voltage-dependent, EAG/ELK/ERG	Interproscan
IPR018490 all species →	Homologous_superfamily	Cyclic nucleotide-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10217 all species →	VOLTAGE AND LIGAND GATED POTASSIUM CHANNEL	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005216 all species →	Molecular Function	monoatomic ion channel activity	Interproscan
GO:0006811 all species →	Biological Process	monoatomic ion transport	Interproscan
GO:0016020 all species →	Cellular Component	membrane	Interproscan
GO:0055085 all species →	Biological Process	transmembrane transport	Interproscan
GO:0005249 all species →	Molecular Function	voltage-gated potassium channel activity	Interproscan
GO:0005887 all species →	Cellular Component	plasma membrane	Interproscan
GO:0042391 all species →	Biological Process	regulation of membrane potential	Interproscan
GO:0071805 all species →	Biological Process	potassium ion transmembrane transport	Interproscan
GO:0006813 all species →	Biological Process	potassium ion transport	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQNNP00000001713.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.