Gene detail

Detailed information of ENSQNNP00000001979.1 in Candelabrum cocksii

Genomic Location: not available for this species
NR annotation: XP_002164065.4, uncharacterized protein LOC100206888 [Hydra vulgaris]
Species Candelabrum cocksii · all data for this species · gene families

Sequence

CDS

ENSQNNT00000002064

ATGGGATGGCACACCCTCAAACGCATAAAAAGCAAAGACAAATGTGCTAAAAGTAAAAAGGAGATAAGCACTCTTGCCGATGAAATATTACAGGTAACACACACAGTTACCTTGCACATATTAATGTTACAAACTGCTACGCAGACGCTATTGGCGAAAGCTCTTTACGACAACTTAGCCGACGCTCCCGATGAATTGAGTTTTCGTAAAGGCGATATCGTCACCGTGATCGAGAGAGACGTCGACGGGTTAGTCGGCTGGTGGTTATGTCTTCTTCATGGCAGACAGGGAATCGTGCCCGGGAATCGTCTGCAGGTGATTCCCTCCATGGAGTTGGACGCCTTTGAGAGGGACACATGCAAACGCTCCTCTTATGAAACTGATGAATTTTCCGATAGCGCTGATGTCGTGGAAAACACTGGACACTTTTATGATGTGGTACCCACAAAGGCGCACCCTCCACCGTTGAGTATAAAAGACATGTTCAATATTCCCTACAAATCATCACAATCGAGCGCCGAAGAGTTATATGATGTGCCGAAAAGCCAATGCTCCGAAGAACTTTACGATGTACCGAAGACCCCTTCCTTGACGTCACAGGAAGAGGTCTACGATGTACCAAAAACTGACACAAGATCAACTAGCGAGTACGAGAAACCGTCAAGTGAACTGTACGATGTTCCGAAACGCGACGACTACGATAAACCCCGCACGCCGTCCGTCACTAGAAGCACTGATCTCTATGATGTTCCCAAGCCGACGAACACGTCAGAAGAGCTTTACGACGTTCCAAAACCAAACGCCGACCAGGAGATAGCCGCTCTCATGGGCGAGATTTACGACTCCCCTTTTAATTCCGACTCGGCTATGAGCACAATAAAACGTTCTCCTAAAGCCAGCTTGATCTCATCGCCCAGACACAGCCGCGAGCTGTCTGCATACAACGGAAATTTACTGAATACTAATGAAGAACTGTGCGTCACACCGAAACAAGTCTCCACCTATGACCCAAGTATGCTTTCCACTAACGTGACGTCCAAGACCGTTTTCGATGAATTTTACGACGTGCCCGCGTTTAAATCAACACACCGTCACACTGAAACATCTTCTAGTACACTACCCAGAGGATTCAGTCCGCATAGTAATAGTTCGCCAAGAAATTCGGCAGAAATATATGATGTGCCGTCAAAAAAAAGCGACAGAAATTCACTGGATTCGTCGCGTTTGCAGCAGACGGCAAGTGTCAACTCGGAAATCTACGACATCCCGAAAAGTAACGCCGACACTGTCAACTCGGAAATCTACGACACCCCGAAAAGTAACGCCGACACGCAAGAGATTTACGATGTGCCGCAGACGGCAAGACCTCGAAACGTCGCCACCGGCAACCTTATTCTGCCGGACGTTGATGACGATGATTACGTTGACTATCATGACATTTGGAGCGATGAACCACCTACAGAACTCGTTCAGCAACACACCAAGGTAAACAATTCAATATTAAATACCAGCAACAGCAGTACGGACAGTCACAAGAAGTCCATCCTCGATCAAATCAACTTCGAAGCCGTAAAGGAACTGGATATGAGCAAATCAGAAGCCGTGGAGAGATTAAGCAAACTTCACTTAGCCGTGGACACGTGTGTGCAAAACCTACTCTCTTTCTGCATGGCCAACTGGCTGGATGTCGCTTCCTTAGAGAGAACCATACCCTCTATTAAGAACTTATCAAGTAAACTGAAAACAGTGCTAAGGTTGCTAACTGAGTTTGGTCTCGGGGCACTTGTCAACACCACACGCAGCACTAACGGGGAAATTCTCATGGATAAACTCATCGGGGAAGTGGAACCGTTGCTCGAGTCGTActacaaagttaaaatttgCCTGATGCATTTAGaCGGCAGCAAATGGGTCGTCCCCAAATCTCGCTCCAGTAGCACGGACAAATTCTTCGCCACATTGAATGCCATTATGATTCTCTCTCAACGAATTCCGGAACAGTGCCGGTTATTTAGCCTGGCCGTGCAAAACAATGTCGCTGAATTATTCGCGCCGGATTCATTAGAGGAGGTAAATGAATCTTTGGATTCGGCCATCAAGACGACAGATGAAAAAACAGATTTTTCGGGCCGTCGACAACAGGCTAGAGATTCTTCCTACATGCGGCCCGTACCGAAAATCCCTCCGAAACCGACGTTGCCAACGCAACGAAGATCGTTAGCCGGTGTTTTAGAACCACCTGAATCCCCTCGGGTTGTGAATCTCGGCTCACGTGGATTCGGTCACATCGAACGCCTGGTGACGGATTATACGCCGGATAATTCCCGTCAAAAGAAATATGCATCCGATCCGGCAACTCCGTCGCATCAAGAAAGTCAAAAGAGCATGTGGGGAGGTAGTTGTCCATTGCTGCTCGATCGGCACTCCACCGTTGCCGCTACTCGCGACACTTCATCTTCGATCGGCGTTAATATCATCGAGGAGGAGAGCGCCGCTAAATCCACCACACCGCTACACTATCGTTCCACTTCACAGCCGATTGGCGAGCGCACCAAGAAGAACGTGTTCGATTTCGAAGAGGGACTCGCTCTCTCTCCACTCGACCACCGCGATATCGAGGCGCTGGAGTTTTTCTGTCGTCAGGTCGAATCACAAGTTATGTTGCTGAGGGAGGCGATGAAAAACCTGACGGAAACCGTTGAGAACCGCGAGGAGCCAGTGCAGTTCGTGTCCCACTCGAAATTTATCATACTCACCGCTCACAAGGTGGTACACGGAGGTCAGGAAATATCCGAACGACTCATCAATCAagctataaaaaaaaaactaaaagaggGCACCTCTCATTTAACGGTGTGCATAAGGGCGGTTGTGTCCGCTACCAAGACCGCCGCTGTTGAGTTCCCAGACCCCGGCGCAATGATGGAAATGATTAGCTCCGTGCTTGCGATCGGGGATGCCGTTCGGATTATACACAGCGAGTGCAGGAGGGCTTTAGACGCTTAA

Transcript

ENSQNNT00000002064

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q61140	Breast cancer anti-estrogen resistance protein 1 OS=Mus musculus OX=10090 GN=Bcar1 PE=1 SV=2
Q63767	Breast cancer anti-estrogen resistance protein 1 OS=Rattus norvegicus OX=10116 GN=Bcar1 PE=1 SV=1
P56945	Breast cancer anti-estrogen resistance protein 1 OS=Homo sapiens OX=9606 GN=BCAR1 PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0003917 (this species only)
Ubiquitin family	UBD\|Other\|SH3 · all ubiquitin genes in this species

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF12026 all species →	CAS_C	Crk-Associated Substrate C-terminal domain	Domain	Interproscan
PF00018 all species →	SH3_1	SH3 domain	Domain	Interproscan
PF08824 all species →	Serine_rich	Serine rich protein interaction domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021901 all species →	Domain	CAS family, C-terminal	Interproscan
IPR001452 all species →	Domain	SH3 domain	Interproscan
IPR038319 all species →	Homologous_superfamily	CAS, serine rich four helix bundle domain superfamily	Interproscan
IPR036028 all species →	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR037362 all species →	Family	CAS family	Interproscan
IPR014928 all species →	Domain	Serine rich protein interaction domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10654 all species →	CAS SCAFFOLDING PROTEIN	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0005515 all species →	Molecular Function	protein binding	Interproscan
GO:0005737 all species →	Cellular Component	cytoplasm	Interproscan
GO:0005886 all species →	Cellular Component	plasma membrane	Interproscan
GO:0007169 all species →	Biological Process	cell surface receptor protein tyrosine kinase signaling pathway	Interproscan
GO:0016477 all species →	Biological Process	cell migration	Interproscan
GO:0090527 all species →	Biological Process	obsolete actin filament reorganization	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ENSQNNP00000001979.1.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.