Detailed information of ENSQNNP00000006905.1 in Candelabrum cocksii

Genomic Location: :...
NR annotation: XP_002157712.2, E3 ubiquitin-protein ligase rnf8 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q803C1E3 ubiquitin-protein ligase rnf8 OS=Danio rerio OX=7955 GN=rnf8 PE=2 SV=1
Q5FWP4E3 ubiquitin-protein ligase CHFR OS=Xenopus laevis OX=8355 GN=chfr PE=1 SV=1
Q6P256E3 ubiquitin-protein ligase CHFR OS=Xenopus tropicalis OX=8364 GN=chfr PE=2 SV=1
Gene familySubfamily
Ubiquitin FamilyE3|E3 activity RING|RING

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00498FHAFHA domainFamilyInterproscan
PF13920zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR017907Conserved_siteZinc finger, RING-type, conserved siteInterproscan
IPR000253DomainForkhead-associated (FHA) domainInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR008984Homologous_superfamilySMAD/FHA domain superfamilyInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR052256FamilyE3 ubiquitin-protein ligase CHFRInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR16079UBIQUITIN LIGASE PROTEIN CHFRInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004842Molecular Functionubiquitin-protein transferase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0007093Biological Processmitotic cell cycle checkpoint signalingInterproscan
GO:0016567Biological Processprotein ubiquitinationInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K10667RNF8; E3 ubiquitin-protein ligase RNF8EC:2.3.2.27
DNA repair and recombination proteinsko03400deepkoala

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