Gene detail

Detailed information of ENSQNNP00000008710.1 in Candelabrum cocksii

Genomic Location: not available for this species
NR annotation: XP_047134227.1, integrator complex subunit 5 isoform X2 [Hydra vulgaris]
Species Candelabrum cocksii · all data for this species · gene families

Sequence

CDS

ENSQNNT00000009028

ATGGCTGACTGTGAAAGTGTTCAGcaAATATTGTTGGAAGATGTGACTTCGTTTTTATCTAAAGAATCTGGTGAAAAAAGTTCTACTGAAGATCGAACAGACAGTGCTACAGTATTGTTGCAATCTTTGCCATGTGCTCGTTATGCTGTCCTAGAAAAAATTGGCGAAGTGTTCTTTAACGAAGCATATCATTACACGGTCGATGtagaaaaagaacaacttgaagGTTTACCCCAAAATTTTGAACCTCTTGAATCCAAACGGAGTTCACAGATTAAAAAGATACAGCATGTTCTCTCAGTTTCTATTGATGCCAACTCTAAAGCATGGGCTCCAATGATTTTCCAGtGGGCAGTTCAAACTCTCAGTCAAATTTGCAATCAATACGGTACGAAAAGAAGCTTTGCTTCTTTCACTTTGGAGGAAAGATTTGACCTCTGGCTGAACTGTACAGCAACGAAAACATTACTAGAGATCACGATCAGTTGTCTGCATAAAATTATACAAAAGAACCAAGATAATTGCTTGAAACGGCTTTTGAACGCCACCCTCTCCTGTGCCCCGTACTTTGACTGGGCACTCGCCCATATAAGCTCAGTGTTTTCAAATATTGTGCCGTACAAGTTTCTGAGCCACTCGTTGGAAGCATTCAGTGTGCAGTCTCGAAAGACAGACATGCTTGTAGAAACCATGTTGGTTGTGTTCCGTCACATCAAACAACGACACAACATTGAAAAAGCCCTTGAAAAACTGTTCACTGAAAGCCTGGTTGAAGAAGATTGTGAGAACCATTTGAAGCTCTGCACGGTCCCCTTCATTTTGCACATCACCATCAAATCAAACAACCTGTTCATGCCGTTACTAGACACTGTCCTTAATTCCTTTTTAACCGATTACAAAAGTCTGCATGTTTTGGAAAAGCAAAGCCTAAAGCGTGATGCTGCTCTTCAGAGGGGATTGCTTCGTCGTTTGATAGACTGCATTGAGATGACAGAAACGTCTGCTTATGGAATTGtgcagtttttattgaaatatgtaTGCAAAGAAGACGAAACATTAGAGAGAGATAACCCTACATTGCTTGATTCCCTTCAGCGAGGTTGCACTATCGTAATGGAACTGCTTATTATCCAGTTAAATAACGATGTTTACCATTGCAACACATTTCAAATGACCGGCGACAAGAAAATAGAGAACTTATCGAAAAAGTGTATTTTCTTATCGTCTCTTTCCAAATACACCAAGCAACTTTGTTTACAGATGTTCAATAGCACCCAATTGAAACAGAAGTATTTACACTCTCTCCTTGTTGTCATGGCGAAACAGGAAGGCTTTTACCAAATGCGAGAAATACTTACAGCAATGTTTCTGAATACGAATTTCAACACTTGTCATGCAAATTTTTTACGCTGCACTGAGGAATTTCAAATATCTCACAGTGGGGTGTTAGCAAAAACTGCTCATCATCTTTTGGGTGCACTACACTCGACTAATACCTACTCTGATACTCAGaaGAGAATGTTACTTCACAACATCTTAGTGTTGCTTGACGATAAAAAACAGAGTTTGTTCAAAAATTTAGATATGATGAGGTTTGTTCCATCTCACATCACAAAGATCTCCAAACTGCTTGTAACAATGCCTGAAGACAATGAGCTGTTGATCCATGCAACTTCCCTACTGAAGATGCTCATTCCACAAACGTTCAGGGTGTCTAACTATGCGGTTGTTTCTCAGGATCTTGTAGCACTTTGCATGTATCATATAAAGAAGTTGAAAGTGTTAAACAATATGAAAGATTTTGACATCACCAGTTTTTGGTTGCATTGCAGCAAAGATCTCCTTGCCCTCATCATAACACATTATAATGGCGTTCAACAGTTCATCATACGGCTCCTTCTTGAGGGATTCTTAGATAAGGATGAGGAAATCACAGAGAAAATGTTTGAGTTGCCGTTGGTTAAGGCCGAGTTACTCGAAAAGAATTGCTCGCTGGTGAAGAACAATCGTTTTGCACAGAACAACAGTGCCGTGTGTTTCCAAGACGGGTTGCGGttgaacaaaagaaagaggGTGGATATCTCAACTAGAAACAGTAACTTCGTTCGACAATTTCAAGTCAGCATTCTAAGTCACGTCCTCTCGTTAACCACAGTTCACAGTGAACCACCTTCTGATCACGTGTTTGCGAGGACCTGGGCCGAATGCAAGTTCAAACGCATTTATCCAACCACTTACGTCTACACTGCAGGTTTGTTAGTAGAGTTAGTGTGTCCAGAACTCATTCCAATCACGCCGTGGCCTGACGAAGACTTTCTAAAATACACAATTGAAAGAGATTTGAAGATTCAAAAGGCTTTCTCAATGAATCCGATACTATGGGAGGTGTTAAAGATGATATCAATGGAGCGCCCCGCATTGCTCCATTGTTGCGTGATAGTTCAGAGTTTGCTCGGGATGATGTTGCAGTTTTGGATGGCAAATCGGCTGCCGTCGTCGAAGGCTTCTCCTTGCGAACTAGACAACACTACAAAACTCATgtacattttgaaaaacTGTGGTTGGTTACCTCATGATTTTGAGGACATTACTGAGATATTTCCATTGATACAACCAAGCGAGATATTTGAGATTCTAAGCTCCGTGTGGAAGTACTTGCAGTCAGGTAACTACGCGCCGGgaaaattcattgaaaaagaTGATTTGGGACGTCCCTGTCTCCCACCTAACGCAGACTTGCTGCATCAATTGAGAGCCGTTATAAAGGTCATATTTCTGCGCAACATGTCGGAATTGGGACGTTATTATTGCAGGTTTTTGCCGGAAAATGCTACTTAA

Transcript

ENSQNNT00000009028

agtttatatatatatcagttgaaagaaaattagAAATTGTGCAAATGCAGAGATAACTTTATGGCTGACTGTGAAAGTGTTCAGcaAATATTGTTGGAAGATGTGACTTCGTTTTTATCTAAAGAATCTGGTGAAAAAAGTTCTACTGAAGATCGAACAGACAGTGCTACAGTATTGTTGCAATCTTTGCCATGTGCTCGTTATGCTGTCCTAGAAAAAATTGGCGAAGTGTTCTTTAACGAAGCATATCATTACACGGTCGATGtagaaaaagaacaacttgaagGTTTACCCCAAAATTTTGAACCTCTTGAATCCAAACGGAGTTCACAGATTAAAAAGATACAGCATGTTCTCTCAGTTTCTATTGATGCCAACTCTAAAGCATGGGCTCCAATGATTTTCCAGtGGGCAGTTCAAACTCTCAGTCAAATTTGCAATCAATACGGTACGAAAAGAAGCTTTGCTTCTTTCACTTTGGAGGAAAGATTTGACCTCTGGCTGAACTGTACAGCAACGAAAACATTACTAGAGATCACGATCAGTTGTCTGCATAAAATTATACAAAAGAACCAAGATAATTGCTTGAAACGGCTTTTGAACGCCACCCTCTCCTGTGCCCCGTACTTTGACTGGGCACTCGCCCATATAAGCTCAGTGTTTTCAAATATTGTGCCGTACAAGTTTCTGAGCCACTCGTTGGAAGCATTCAGTGTGCAGTCTCGAAAGACAGACATGCTTGTAGAAACCATGTTGGTTGTGTTCCGTCACATCAAACAACGACACAACATTGAAAAAGCCCTTGAAAAACTGTTCACTGAAAGCCTGGTTGAAGAAGATTGTGAGAACCATTTGAAGCTCTGCACGGTCCCCTTCATTTTGCACATCACCATCAAATCAAACAACCTGTTCATGCCGTTACTAGACACTGTCCTTAATTCCTTTTTAACCGATTACAAAAGTCTGCATGTTTTGGAAAAGCAAAGCCTAAAGCGTGATGCTGCTCTTCAGAGGGGATTGCTTCGTCGTTTGATAGACTGCATTGAGATGACAGAAACGTCTGCTTATGGAATTGtgcagtttttattgaaatatgtaTGCAAAGAAGACGAAACATTAGAGAGAGATAACCCTACATTGCTTGATTCCCTTCAGCGAGGTTGCACTATCGTAATGGAACTGCTTATTATCCAGTTAAATAACGATGTTTACCATTGCAACACATTTCAAATGACCGGCGACAAGAAAATAGAGAACTTATCGAAAAAGTGTATTTTCTTATCGTCTCTTTCCAAATACACCAAGCAACTTTGTTTACAGATGTTCAATAGCACCCAATTGAAACAGAAGTATTTACACTCTCTCCTTGTTGTCATGGCGAAACAGGAAGGCTTTTACCAAATGCGAGAAATACTTACAGCAATGTTTCTGAATACGAATTTCAACACTTGTCATGCAAATTTTTTACGCTGCACTGAGGAATTTCAAATATCTCACAGTGGGGTGTTAGCAAAAACTGCTCATCATCTTTTGGGTGCACTACACTCGACTAATACCTACTCTGATACTCAGaaGAGAATGTTACTTCACAACATCTTAGTGTTGCTTGACGATAAAAAACAGAGTTTGTTCAAAAATTTAGATATGATGAGGTTTGTTCCATCTCACATCACAAAGATCTCCAAACTGCTTGTAACAATGCCTGAAGACAATGAGCTGTTGATCCATGCAACTTCCCTACTGAAGATGCTCATTCCACAAACGTTCAGGGTGTCTAACTATGCGGTTGTTTCTCAGGATCTTGTAGCACTTTGCATGTATCATATAAAGAAGTTGAAAGTGTTAAACAATATGAAAGATTTTGACATCACCAGTTTTTGGTTGCATTGCAGCAAAGATCTCCTTGCCCTCATCATAACACATTATAATGGCGTTCAACAGTTCATCATACGGCTCCTTCTTGAGGGATTCTTAGATAAGGATGAGGAAATCACAGAGAAAATGTTTGAGTTGCCGTTGGTTAAGGCCGAGTTACTCGAAAAGAATTGCTCGCTGGTGAAGAACAATCGTTTTGCACAGAACAACAGTGCCGTGTGTTTCCAAGACGGGTTGCGGttgaacaaaagaaagaggGTGGATATCTCAACTAGAAACAGTAACTTCGTTCGACAATTTCAAGTCAGCATTCTAAGTCACGTCCTCTCGTTAACCACAGTTCACAGTGAACCACCTTCTGATCACGTGTTTGCGAGGACCTGGGCCGAATGCAAGTTCAAACGCATTTATCCAACCACTTACGTCTACACTGCAGGTTTGTTAGTAGAGTTAGTGTGTCCAGAACTCATTCCAATCACGCCGTGGCCTGACGAAGACTTTCTAAAATACACAATTGAAAGAGATTTGAAGATTCAAAAGGCTTTCTCAATGAATCCGATACTATGGGAGGTGTTAAAGATGATATCAATGGAGCGCCCCGCATTGCTCCATTGTTGCGTGATAGTTCAGAGTTTGCTCGGGATGATGTTGCAGTTTTGGATGGCAAATCGGCTGCCGTCGTCGAAGGCTTCTCCTTGCGAACTAGACAACACTACAAAACTCATgtacattttgaaaaacTGTGGTTGGTTACCTCATGATTTTGAGGACATTACTGAGATATTTCCATTGATACAACCAAGCGAGATATTTGAGATTCTAAGCTCCGTGTGGAAGTACTTGCAGTCAGGTAACTACGCGCCGGgaaaattcattgaaaaagaTGATTTGGGACGTCCCTGTCTCCCACCTAACGCAGACTTGCTGCATCAATTGAGAGCCGTTATAAAGGTCATATTTCTGCGCAACATGTCGGAATTGGGACGTTATTATTGCAGGTTTTTGCCGGAAAATGCTACTTAAATATGCATTGTGAATAAATATTTCGTTgcgaaaaaaaattgaaatatccTTTTGTAACTGCGAAATATAAGAAAGAGATTTGATATATAATATCAATCGTTTCGTTTCATTAAATGTTTggtgtaaacaaacaaacaaacaacgacaaacaaaaacagtaAACACGGAAATATTGCAATAAGTAGCTCATCTCCTAAAGTCGCAAATCAATGTCATTTCCGACAATTCAAATTTGCTGGTTTTGCATTTTGCGGTTTGTTTTTCGAAATGTCGCCAATTTTTCCTTCCCTCAATGAGTGTGCATATCTTCGAGGCAGATGTTGGATCAATATTTGATGTGATCAGTCGGTGTTTGTTAAAGCAAAAAGATAAATACGCGTTatgaacgtttttattttgtcttcCTTGTTGTTATTCTCAAAAGGAAATCGGGGTTGCGAAACGTGCGTTGCTATGG

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q9VFS6	Integrator complex subunit 5 OS=Drosophila melanogaster OX=7227 GN=omd PE=1 SV=2

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004082 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF14837 all species →	INTS5_N	Integrator complex subunit 5 N-terminus	Family	Interproscan
PF14838 all species →	INTS5_C	Integrator complex subunit 5 C-terminus	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR040316 all species →	Family	Integrator complex subunit 5	Interproscan
IPR029445 all species →	Domain	Integrator complex subunit 5, N-terminal	Interproscan
IPR029444 all species →	Domain	Integrator complex subunit 5, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR31697 all species →	INTEGRATOR COMPLEX SUBUNIT 5	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0032039 all species →	Cellular Component	integrator complex	Interproscan
GO:0034472 all species →	Biological Process	snRNA 3'-end processing	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K13142	INTS5; integrator complex subunit 5	-	Spliceosome	ko03041	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.