Gene detail

Detailed information of ENSQNNP00000010561.1 in Candelabrum cocksii

Genomic Location: :...
NR annotation: XP_047133703.1, mitochondrial basic amino acids transporter-like [Hydra vulgaris]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

ENSQNNT00000010924

tgttttaattgtaAACCATATATTAATCATTCTTATACTTGTGTAATAATGATCAATGTGTTGAAATTGTGCGTCCATTTACCAGCAAGTAATGTCATGAACAAGTCGAATAACAAAAAGTGATGTACCTATGGTGAAATAATGCTGAAGACAGATGTTGTTCCCTTGATTGATGCGTCAGCTGATTTTTGTGCTGGATGGATCTCAGgTTGTGCAGGAGTCCTAGTGAGCCATCCATTCGACACGATCAAGGTGCGCTTACAAACACAAGGTGTGGCTCACAGTAGATCGACACACTACACCGGTACATGGCACTGTTTAACTGAAACCATTCGAAGAGAGAAGATTCGTGGTCTTTTTAAAGGCATTTCCTCGCCACTACTCGGCACTGCGTTATGGAATGCTGTTGTTTTCGGTTCCTATGGCAACACAATACGGCATCTTTCCGAAGGAAAATTACATCATCaacatgaaatgaaaaatatcttcATCGCAAGTCTGGCCACTGGTGCCGCGCAGACCGTGGTCATTTGTCCCCTGGAATTGACTAAAACGCGATTGCAGATCCAATCTTGCGACTATTCGACATTATATAAAGGGTTGATCGATTGCACTCGCAAGATACTAAAAGAAGATGGTGTTCGCGGGTTGTTTAAGGGGTTCTCTGGAACACTGTATCGTGATCTCATTGGTTTCCCTGTATATTTTTGCTCGTTTGAACTTCTGTGTCGTTTGCTCTCCTCTGGGAATGCGCCTTACCTTGATCTTGGAGCTATACAACTTGCTATTGCGGGTGGCATAGCTGGCTCACTATCCTGGACTGCTGCTTTCCCGTCAGACGTGATAAAATGCAGAACGCAAGTCGATTACGGCGGTCGCTATAAAAACTTCTCGCATTGTCTGCGAACGTCTTTCGAAGGAGAAGGCGTCATGATATTTAAGTTCGGTTTATTACCCACTGTGCTCAGGGCTTTTCCAATGAACGCCGCTATCTTTAGTATTTACACGATATCGATGCGTTGGTACAATGAACGAATGTTTGGCGTCGAAATTTACGATTGCTTGTTGGATACATGACCTGTTCACAGTTTACGGTTGCTTGCTGGATGCATGACCTGTTCACagttttcgttgttttttacatttatttcgtttaaaatatagttttgcaatttttgtaatttgtctACATAATATAGTTTCTAATAAATTCTGAACAACCAATCTACATCTTAAGTTGAACCCTTTGAATGTTGAATTTCAATCATACATACATGTGGATAGATGCGGAAAATATCGATTTTCCCAATCTAACTGGTAATACCCATTTCCCATGATCGTTCAAAAGCACTTTAAAGTGCGTACTCGTCTGTGCGTGGATTAGTTTTTGtctcattttcaaatttattaaatagaGAAGAAAATCTGTTATGGTAATTTTATAGACCGGCTTTTTTGCCTACATTATTGTCTTCTGaaataggttttattttttgtcaatttttctCTTGTTATGTAAATATTTGTAGTCCAGATAATtctttatataattatagttTTTTATCGTTGAAACTCATGTGCAACATTCGCGATTACTAGATTACGTtaaatttcatatatatatatatacactctTTATACTTATATCTTTATACTCTATATACTTTTAGACAATCGACTTGCGAAAGTGTCAGAACAAGTAACGTCCCAGACCAGCGACTTTCCTTCCATAAATGGATATATGGTCATACCATCAGGGCGCCAGCGACGTCAAGAGCCCGACGAACTATGTCGTTGATGGCTGATTGGCGTGGATGTCTGCCGGCACTCCTCAGAAAAGACAGAGGGTGAAGACCATCGACATCGATTAGACGGCCGCATTGGCAGAGGTGGGATTCGCATGTCTTAGCACCAATTCTCATGGCGACGGCGAAGCGGAGGCAGTCATCATCCAGTAAAATGCCGGTTGCGCTGGAGGGAAGAGCCGTGAGCCAAGCACCGCTGTTGGGCTGAGAGGCAGTCTGCAAACAAGCAATGCGGTGTTGGTCCACTATCAGACTTTATAGAAGGGAAATC

Protein

Uniprot

Uniprot term	Description
Q5HZE0	Mitochondrial basic amino acids transporter OS=Rattus norvegicus OX=10116 GN=Slc25a29 PE=2 SV=1
Q8N8R3	Mitochondrial basic amino acids transporter OS=Homo sapiens OX=9606 GN=SLC25A29 PE=1 SV=2
Q8BL03	Mitochondrial basic amino acids transporter OS=Mus musculus OX=10090 GN=Slc25a29 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00153	Mito_carr	Mitochondrial carrier protein	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR023395	Homologous_superfamily	Mitochondrial carrier domain superfamily	Interproscan
IPR018108	Repeat	Mitochondrial substrate/solute carrier	Interproscan
IPR050567	Family	Mitochondrial Carrier	Interproscan
IPR002067	Family	Mitochondrial carrier protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45624	MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0006810	Biological Process	transport	Interproscan
GO:0022857	Molecular Function	transmembrane transporter activity	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K15108	SLC25A19, DNC, TPC1; solute carrier family 25 (mitochondrial thiamine pyrophosphate transporter), member 19	-	Transporters	ko02000	deepkoala