Detailed information of ENSQNNP00000012080.1 in Candelabrum cocksii

Genomic Location: :...
NR annotation: XP_047132460.1, endoribonuclease Dicer-like [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q7XD96Endoribonuclease Dicer homolog 3b OS=Oryza sativa subsp. japonica OX=39947 GN=DCL3B PE=3 SV=2
Q1DKI1Dicer-like protein 1 OS=Coccidioides immitis (strain RS) OX=246410 GN=DCL1 PE=3 SV=3
Q0CW42Dicer-like protein 1 OS=Aspergillus terreus (strain NIH 2624 / FGSC A1156) OX=341663 GN=dcl1 PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03368Dicer_dimerDicer dimerisation domainDomainInterproscan
PF00270DEADDEAD/DEAH box helicaseDomainInterproscan
PF00636Ribonuclease_3Ribonuclease III domainFamilyInterproscan
PF00271Helicase_CHelicase conserved C-terminal domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000999DomainRibonuclease III domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR005034DomainDicer dimerisation domainInterproscan
IPR011545DomainDEAD/DEAH box helicase domainInterproscan
IPR036389Homologous_superfamilyRibonuclease III, endonuclease domain superfamilyInterproscan
IPR014001DomainHelicase superfamily 1/2, ATP-binding domainInterproscan
IPR001650DomainHelicase, C-terminal domain-likeInterproscan
IPR038248Homologous_superfamilyDicer dimerisation domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14950DICER-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004525Molecular Functionribonuclease III activityInterproscan
GO:0006396Biological ProcessRNA processingInterproscan
GO:0016891Molecular FunctionRNA endonuclease activity, producing 5'-phosphomonoestersInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0016442Cellular ComponentRISC complexInterproscan
GO:0030422Biological ProcesssiRNA processingInterproscan
GO:0090501Biological Processobsolete RNA phosphodiester bond hydrolysisInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11592DICER1, DCR1; endoribonuclease DicerEC:3.1.26.-
Chromosome and associated proteinsko03036deepkoala

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